BLASTX nr result

ID: Cimicifuga21_contig00000260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000260
         (1433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   263   8e-68
ref|XP_002509832.1| protein binding protein, putative [Ricinus c...   242   2e-61
ref|NP_001241561.1| uncharacterized protein LOC100816369 [Glycin...   239   1e-60
gb|ACU24554.1| unknown [Glycine max]                                  233   7e-59
ref|XP_002298023.1| predicted protein [Populus trichocarpa] gi|2...   233   9e-59

>ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Vitis
            vinifera]
          Length = 213

 Score =  263 bits (672), Expect = 8e-68
 Identities = 128/212 (60%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
 Frame = -3

Query: 1110 MGGCCCCASRRAQLNGTPVYYYCPQALEERQPLSSSHGAVSALSGGLLVDTNLDTSSPDT 931
            MGGCCCC+S+  +LNGTP YYYCP+A EE +PLSS HGA S LS GLLVDTNL TS PDT
Sbjct: 1    MGGCCCCSSKGTELNGTPAYYYCPRASEEHEPLSSHHGAASTLSTGLLVDTNLGTSPPDT 60

Query: 930  YRAPPTPMPYDSDLGRPQTPPSVQESRSNKTDGAVQATDSQSMEEISSANAVGTPNTGEE 751
            YR PP P+PYD DLG PQTPP  +ES  NK D  VQ T+S S+ E    N + T    E+
Sbjct: 61   YRPPPAPIPYDVDLGHPQTPPVAEESCVNKNDTVVQTTNSGSLGEAVEGNMLETLAKCED 120

Query: 750  LKEIDCKSQVDSVXXXXXXXXXXXXXXXXPFL-PTEEED-CPICLEEYDAENPRIITKCD 577
            LK+ DCK    S                 P +  T+EED CP CLEEYDAENP+I+TKC+
Sbjct: 121  LKQSDCKMLAQSELTSSKETEVELSKSGDPIVSSTDEEDVCPTCLEEYDAENPKIVTKCE 180

Query: 576  HHFHLACILEWMERSETCPVCDQEMIFNNDIN 481
            HHFHLACILEWMERS+TCPVCD+EMIFN   N
Sbjct: 181  HHFHLACILEWMERSDTCPVCDKEMIFNTATN 212


>ref|XP_002509832.1| protein binding protein, putative [Ricinus communis]
            gi|223549731|gb|EEF51219.1| protein binding protein,
            putative [Ricinus communis]
          Length = 212

 Score =  242 bits (618), Expect = 2e-61
 Identities = 116/208 (55%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
 Frame = -3

Query: 1110 MGGCCCCASRRAQLNGTPVYYYCPQALEERQPLSSSHGAVSALSGGLLVDTNLDTSSPDT 931
            MGGCCCC+S+ A++N  P YYY P+A EE  PLSS HG+V+ LS GLLVDTNLDTS PD 
Sbjct: 1    MGGCCCCSSKGAEINSAPAYYYYPRASEEHVPLSSRHGSVATLSTGLLVDTNLDTSVPDA 60

Query: 930  YRAPPTPMPYDSDLGRPQTPPSVQESRSNKTDGAVQATDSQSMEEISSANAVGTPNTGEE 751
            YR PP P+P++  +G PQTP   QE+ S+K DG VQ T+S S++E +  N   T    E+
Sbjct: 61   YRPPPPPIPFEMAIGCPQTPQGAQETSSDKDDGTVQTTNSGSVQETTYTNTRETSIKCED 120

Query: 750  LKEIDCKSQVD-SVXXXXXXXXXXXXXXXXPFLPTEEED-CPICLEEYDAENPRIITKCD 577
            +KE DCK+Q +  +                    TEEED CP CLEEYDAENP+I TKC+
Sbjct: 121  VKEPDCKAQTNLELDSAKELEVEFSKSVELLVSATEEEDVCPTCLEEYDAENPKITTKCE 180

Query: 576  HHFHLACILEWMERSETCPVCDQEMIFN 493
            HHFHL+CILEWMERS+TCPVCD+EMI +
Sbjct: 181  HHFHLSCILEWMERSDTCPVCDKEMIID 208


>ref|NP_001241561.1| uncharacterized protein LOC100816369 [Glycine max]
            gi|255641755|gb|ACU21148.1| unknown [Glycine max]
          Length = 213

 Score =  239 bits (611), Expect = 1e-60
 Identities = 119/212 (56%), Positives = 145/212 (68%), Gaps = 3/212 (1%)
 Frame = -3

Query: 1110 MGGCCCC--ASRRAQLNGTPVYYYCPQALEERQPLSSSHGAVSALSGGLLVDTNLDTSSP 937
            MGGCCCC  +++   L+  P YYY P+A EE  PLSS  GA SA SG LLVDTNLDTSSP
Sbjct: 1    MGGCCCCCCSAKETVLSAPPAYYYYPRASEEHVPLSSHQGAASAFSGRLLVDTNLDTSSP 60

Query: 936  DTYRAPPTPMPYDSDLGRPQTPPSVQESRSNKTDGAVQATDSQSMEEISSANAVGTPNTG 757
            DTYR PP P+P++  LG  QTPP+ QE RS+K + ++ +T+S +++E  + +  GT    
Sbjct: 61   DTYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNTSLHSTNSNAIQEPVAGDNHGTSAKL 120

Query: 756  EELKEIDCKSQVDSVXXXXXXXXXXXXXXXXPFLPTEEED-CPICLEEYDAENPRIITKC 580
            EELKE DCK Q D                  P    EEED CPICLEEYDAENP++ TKC
Sbjct: 121  EELKESDCKVQTDLELDSAKGSEIELAKSGKPIDVVEEEDTCPICLEEYDAENPKLATKC 180

Query: 579  DHHFHLACILEWMERSETCPVCDQEMIFNNDI 484
            DHHFHLACILEWMERSETCPVCDQ+++F+  I
Sbjct: 181  DHHFHLACILEWMERSETCPVCDQDLVFDPPI 212


>gb|ACU24554.1| unknown [Glycine max]
          Length = 212

 Score =  233 bits (595), Expect = 7e-59
 Identities = 117/211 (55%), Positives = 143/211 (67%), Gaps = 2/211 (0%)
 Frame = -3

Query: 1110 MGGCCCC-ASRRAQLNGTPVYYYCPQALEERQPLSSSHGAVSALSGGLLVDTNLDTSSPD 934
            MGGCCCC +S+   L+  P YYY P+A EE  PLSS  GA SA SG LLVDTNLDTSSPD
Sbjct: 1    MGGCCCCCSSKETVLSAPPAYYYYPRASEEHVPLSSHPGAASAFSGRLLVDTNLDTSSPD 60

Query: 933  TYRAPPTPMPYDSDLGRPQTPPSVQESRSNKTDGAVQATDSQSMEEISSANAVGTPNTGE 754
            TYR PP P+P++  LG  QTPP+ QE RS+K + ++ +T+S +++E  + +  GT    E
Sbjct: 61   TYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNTSLPSTNSNAIQEPVARDIHGTSAKLE 120

Query: 753  ELKEIDCKSQVDSVXXXXXXXXXXXXXXXXPFLPTEEED-CPICLEEYDAENPRIITKCD 577
            E KE +CK Q D                  P    EEED CPICLEEYDAENP++ T CD
Sbjct: 121  EPKESECKVQTDLELDSAKGSEIELAKSGKPIDLVEEEDACPICLEEYDAENPKLATNCD 180

Query: 576  HHFHLACILEWMERSETCPVCDQEMIFNNDI 484
            HHFHLACILEWMERSETCPVCDQ+++F+  I
Sbjct: 181  HHFHLACILEWMERSETCPVCDQDLVFDPPI 211


>ref|XP_002298023.1| predicted protein [Populus trichocarpa] gi|222845281|gb|EEE82828.1|
            predicted protein [Populus trichocarpa]
          Length = 212

 Score =  233 bits (594), Expect = 9e-59
 Identities = 117/212 (55%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
 Frame = -3

Query: 1110 MGGCCCCASR-RAQLNGTPVYYYCPQALEERQPLSSSHGAVSALSGGLLVDTNLDTSSPD 934
            MGGCCCC+S+  AQ N  P YYY P+A  E  PLSS H A SALS GLLVDTNLDTS PD
Sbjct: 1    MGGCCCCSSKGAAQSNSAPPYYYYPRAPAEHVPLSSHHAAGSALSTGLLVDTNLDTSVPD 60

Query: 933  TYRAPPTPMPYDSDLGRPQTPPSVQESRSNKTDGAVQATDSQSMEEISSANAVGTPNTGE 754
             YR PP PMP+D  +G  QT    +E+  +K DGA+Q T+S S +E +  N   T    E
Sbjct: 61   AYRPPPAPMPFDVAVGHLQTLHRSRETCGDKNDGALQTTNSASGQENTGLNTRETSAECE 120

Query: 753  ELKEIDCKSQVDSVXXXXXXXXXXXXXXXXPFL-PTEEEDCPICLEEYDAENPRIITKCD 577
            ++KE+DCK+Q++S                 P +  TEEEDCPICLEEYD ENP++ITKC+
Sbjct: 121  DVKELDCKAQINSELDAAKELEIELSKSVEPLVSATEEEDCPICLEEYDLENPKLITKCE 180

Query: 576  HHFHLACILEWMERSETCPVCDQEMIFNNDIN 481
            HHFHL+CILEWMERSE+CPVCD+E+I +  I+
Sbjct: 181  HHFHLSCILEWMERSESCPVCDKEVIIDPPID 212


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