BLASTX nr result

ID: Cimicifuga21_contig00000255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000255
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|2...   398   e-109
ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [...   392   e-107
ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]   392   e-107
ref|XP_002521429.1| conserved hypothetical protein [Ricinus comm...   391   e-106

>ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|222848628|gb|EEE86175.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  398 bits (1023), Expect = e-109
 Identities = 191/282 (67%), Positives = 219/282 (77%)
 Frame = -3

Query: 847 MIDFSSLHRGQIILLGNGACXXXXXXXXXXXXXXXLSHWKNPKEQKAIVIIILMAPIYAV 668
           M+DFSS+ RGQI LLG G C               + +WKNPKEQKAI+IIILMAPIYA 
Sbjct: 1   MMDFSSMDRGQITLLGCGFCVLLSLHFTVQLLSQHIFYWKNPKEQKAIIIIILMAPIYAA 60

Query: 667 VSYVGLVDFMGSATFFTFLESIKECYEALVIAKFLSLMYSYLNISISKNIVPDGIKGREI 488
            SYVGL+D  GS  FFTFL+S+KECYEALVIAKFL+LMYSYL ISISKNIVPD +KGREI
Sbjct: 61  DSYVGLLDIQGSKAFFTFLDSVKECYEALVIAKFLALMYSYLKISISKNIVPDEVKGREI 120

Query: 487 HHTFPMTFFVPHSVRLDHRTLKQLKNWTWQFVIIRPVCAILMIALQYLDLYPSWVSWIFT 308
           HH+FPMT FVP + RLDHR L  LK+WTWQFVIIRP+C+ILMI LQ L +YPSW+SW FT
Sbjct: 121 HHSFPMTLFVPRTARLDHRNLVLLKHWTWQFVIIRPICSILMITLQMLGIYPSWLSWTFT 180

Query: 307 IXXXXXXXXXXXXXXVFYHVFDKELAPHSPLAKFLCIKGIVFFCFWQGLALQFLVSAGVI 128
           I              +FYHVF KELAPH PLAKFLCIKG+VFFCFWQG+ L  LVSAG+I
Sbjct: 181 IILNISVSVALYSLVLFYHVFAKELAPHKPLAKFLCIKGVVFFCFWQGIVLDMLVSAGII 240

Query: 127 RSHHRWLDVEHIQEAYQNILVCVEMVVFSIIQRSAYSALPYS 2
           RSHH WLDVEHI+EA+QN+LV +EMVVFS++Q+ AY   PYS
Sbjct: 241 RSHHFWLDVEHIEEAFQNVLVILEMVVFSVLQQYAYHVAPYS 282


>ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 295

 Score =  392 bits (1007), Expect = e-107
 Identities = 187/281 (66%), Positives = 217/281 (77%)
 Frame = -3

Query: 844 IDFSSLHRGQIILLGNGACXXXXXXXXXXXXXXXLSHWKNPKEQKAIVIIILMAPIYAVV 665
           +D S++ RGQ+ LLG+  C               L +WKNPKEQKAI+II+LMAPIYAV 
Sbjct: 1   MDISTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIVLMAPIYAVD 60

Query: 664 SYVGLVDFMGSATFFTFLESIKECYEALVIAKFLSLMYSYLNISISKNIVPDGIKGREIH 485
           S+VGL+DF GS  FF  LESIKECYEALVIAKFL+L+YSYLNISISKNIVPDGIKGREIH
Sbjct: 61  SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 484 HTFPMTFFVPHSVRLDHRTLKQLKNWTWQFVIIRPVCAILMIALQYLDLYPSWVSWIFTI 305
           H+FPMT F P +VRLDH TLK LK WTWQFV+IRPVC+ILMI LQ L +YP+W+SW FTI
Sbjct: 121 HSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGIYPNWLSWTFTI 180

Query: 304 XXXXXXXXXXXXXXVFYHVFDKELAPHSPLAKFLCIKGIVFFCFWQGLALQFLVSAGVIR 125
                         +FYHVF KEL PH PL KF+C+KGIVFFCFWQG+ L+ LV+ GVIR
Sbjct: 181 ILNISVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIVFFCFWQGIVLEILVALGVIR 240

Query: 124 SHHRWLDVEHIQEAYQNILVCVEMVVFSIIQRSAYSALPYS 2
           SHH WLDVEHIQEA QN+LVCVEMVVFS++Q+ A+   PYS
Sbjct: 241 SHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAFHVAPYS 281


>ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|222859714|gb|EEE97261.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  392 bits (1006), Expect = e-107
 Identities = 189/281 (67%), Positives = 218/281 (77%)
 Frame = -3

Query: 844 IDFSSLHRGQIILLGNGACXXXXXXXXXXXXXXXLSHWKNPKEQKAIVIIILMAPIYAVV 665
           +DFS++ RGQI LLG   C               L +WKNPKEQKAI+IIILMAPIYAV 
Sbjct: 1   MDFSNMDRGQITLLGCAFCVLLTLLFTVQLLSQHLFYWKNPKEQKAIIIIILMAPIYAVD 60

Query: 664 SYVGLVDFMGSATFFTFLESIKECYEALVIAKFLSLMYSYLNISISKNIVPDGIKGREIH 485
           S+VGL++F GS  FFTFL+S+KECYEALVIAKFLSL+YSYL ISISKNIVPD +KGREIH
Sbjct: 61  SFVGLLNFQGSEAFFTFLDSVKECYEALVIAKFLSLLYSYLKISISKNIVPDEVKGREIH 120

Query: 484 HTFPMTFFVPHSVRLDHRTLKQLKNWTWQFVIIRPVCAILMIALQYLDLYPSWVSWIFTI 305
           H FPMT FVPH+VRLDHR L  LK+WTWQFVIIRP C+ILMI LQ L +YP+W+SW FTI
Sbjct: 121 HAFPMTLFVPHTVRLDHRNLVVLKHWTWQFVIIRPTCSILMITLQMLGIYPNWLSWTFTI 180

Query: 304 XXXXXXXXXXXXXXVFYHVFDKELAPHSPLAKFLCIKGIVFFCFWQGLALQFLVSAGVIR 125
                         VFYHVF KELAPH PLAKFLCIKG+VFFCFWQG+ L+ LVS G+IR
Sbjct: 181 ILNISVSLALYSLLVFYHVFAKELAPHKPLAKFLCIKGVVFFCFWQGIVLEMLVSMGIIR 240

Query: 124 SHHRWLDVEHIQEAYQNILVCVEMVVFSIIQRSAYSALPYS 2
            +H WLDVEH++EAYQN+LV +EMVVFS++QR AY   PYS
Sbjct: 241 PNHFWLDVEHLEEAYQNVLVILEMVVFSVLQRYAYHVAPYS 281


>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score =  392 bits (1006), Expect = e-107
 Identities = 187/281 (66%), Positives = 216/281 (76%)
 Frame = -3

Query: 844 IDFSSLHRGQIILLGNGACXXXXXXXXXXXXXXXLSHWKNPKEQKAIVIIILMAPIYAVV 665
           +D S++ RGQ+ LLG+  C               L +WKNPKEQKAI+II LMAPIYAV 
Sbjct: 1   MDJSTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIXLMAPIYAVD 60

Query: 664 SYVGLVDFMGSATFFTFLESIKECYEALVIAKFLSLMYSYLNISISKNIVPDGIKGREIH 485
           S+VGL+DF GS  FF  LESIKECYEALVIAKFL+L+YSYLNISISKNIVPDGIKGREIH
Sbjct: 61  SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 484 HTFPMTFFVPHSVRLDHRTLKQLKNWTWQFVIIRPVCAILMIALQYLDLYPSWVSWIFTI 305
           H+FPMT F P +VRLDH TLK LK WTWQFV+IRPVC+ILMI LQ L +YP+W+SW FTI
Sbjct: 121 HSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGMYPNWLSWTFTI 180

Query: 304 XXXXXXXXXXXXXXVFYHVFDKELAPHSPLAKFLCIKGIVFFCFWQGLALQFLVSAGVIR 125
                         +FYHVF KEL PH PL KF+C+KGIVFFCFWQG+ L+ LV+ G+IR
Sbjct: 181 ILNFSVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIVFFCFWQGIVLEILVALGIIR 240

Query: 124 SHHRWLDVEHIQEAYQNILVCVEMVVFSIIQRSAYSALPYS 2
           SHH WLDVEHIQEA QN+LVCVEMVVFS++Q+ AY   PYS
Sbjct: 241 SHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAYHVAPYS 281


>ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis]
           gi|223539328|gb|EEF40919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  391 bits (1004), Expect = e-106
 Identities = 188/281 (66%), Positives = 218/281 (77%)
 Frame = -3

Query: 844 IDFSSLHRGQIILLGNGACXXXXXXXXXXXXXXXLSHWKNPKEQKAIVIIILMAPIYAVV 665
           +D S+L+RGQ+ L+G+  C               L +WKNPKEQKAI+IIILMAPIYA+ 
Sbjct: 1   MDISTLNRGQLTLMGSAFCTMLSMHFTVQLLSQHLFYWKNPKEQKAILIIILMAPIYAID 60

Query: 664 SYVGLVDFMGSATFFTFLESIKECYEALVIAKFLSLMYSYLNISISKNIVPDGIKGREIH 485
           S+VGL+D  GS  FF FL+SIKECYEALVIAKFL+LMYSYLNISISKNIVPD IKGREIH
Sbjct: 61  SFVGLLDIRGSKAFFMFLDSIKECYEALVIAKFLALMYSYLNISISKNIVPDEIKGREIH 120

Query: 484 HTFPMTFFVPHSVRLDHRTLKQLKNWTWQFVIIRPVCAILMIALQYLDLYPSWVSWIFTI 305
           H+FPMT F PH+VRLDHRTL+ LK WTWQFVIIRP+C++LMI LQ L  YP+W+SW FTI
Sbjct: 121 HSFPMTLFQPHTVRLDHRTLRLLKYWTWQFVIIRPICSVLMITLQILGTYPTWLSWTFTI 180

Query: 304 XXXXXXXXXXXXXXVFYHVFDKELAPHSPLAKFLCIKGIVFFCFWQGLALQFLVSAGVIR 125
                         VFYHVF KEL PH PLAKFLCIKGIVFFCFWQG+ L  LV+ G+IR
Sbjct: 181 ILNISVSLALYSLVVFYHVFAKELTPHKPLAKFLCIKGIVFFCFWQGVVLDILVAIGIIR 240

Query: 124 SHHRWLDVEHIQEAYQNILVCVEMVVFSIIQRSAYSALPYS 2
           SHH WLDVEHI+EA QN+LVC+EMVVFS++Q+ AY   PYS
Sbjct: 241 SHHFWLDVEHIEEALQNVLVCLEMVVFSVLQQYAYHVAPYS 281


Top