BLASTX nr result
ID: Cimicifuga21_contig00000251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000251
(2556 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 881 0.0
ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putativ... 841 0.0
ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|2... 840 0.0
ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 840 0.0
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata] 839 0.0
>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
vinifera]
Length = 711
Score = 881 bits (2277), Expect = 0.0
Identities = 448/569 (78%), Positives = 502/569 (88%)
Frame = -3
Query: 2164 LGQPIASNKKQKKQKIXXXXXXXXXXXXXXXXDPNAVENFRISKPLREMLKSKGIEALFP 1985
LG+P+ S+ K KK+K+ PNA+ NFRIS+PLRE LKSKGIEALFP
Sbjct: 87 LGEPVNSSLKAKKKKLKVPEMEEEEGKAEEN--PNALSNFRISEPLREKLKSKGIEALFP 144
Query: 1984 IQAMTFDTILDGSDMVGRARTGQGKTLAFVLPILESLTNGPAKTSRKTGYGRSPTVLVLL 1805
IQAMTFDTILDGSD+VGRARTGQGKTLAFVLPILESL NGP + SRKTGYGR P VLVLL
Sbjct: 145 IQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLINGPNRGSRKTGYGRPPCVLVLL 204
Query: 1804 PTRELANQVHADFEVYGKAVGLNSTCLYGGSPYHPQENALKRGVDVVIGTPGRIKDHIER 1625
PTRELA QV+ADF+VYG A+GL S CLYGG+PY QE LKRGVD+V+GTPGRIKDHIER
Sbjct: 205 PTRELATQVYADFDVYGGAIGLTSCCLYGGAPYQAQEIKLKRGVDIVVGTPGRIKDHIER 264
Query: 1624 GNLDLSSLKFRVLDEADEMLRMGFVDDVELILGKVKDLTQVQTLLFSATLPSWVQNISKR 1445
GN+D SSLKFRVLDEADEMLRMGFV+DVELILGKV+D+++VQTLLFSATLP WV+ IS R
Sbjct: 265 GNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDVSKVQTLLFSATLPGWVKEISSR 324
Query: 1444 FLKPSKKTADLVGNEKMKASANVRHIVLPCSSNARSQLIPDIIRCYSSGGRTIIFTETKD 1265
FLKP+ KTADLVGNEKMKAS NVRHIVLPCSS+ARSQ+IPD+IRCYSSGGRTIIFTETKD
Sbjct: 325 FLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSARSQVIPDVIRCYSSGGRTIIFTETKD 384
Query: 1264 SASELAGLLPDARALHGDIQQATREVTLKGFRSGKFMTLVATNVAARGLDINDVQLIIQC 1085
SASELAGLLP ARALHGDIQQ+ REVTL GFRSGKFMTLVATNVAARGLDINDVQLIIQC
Sbjct: 385 SASELAGLLPGARALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQC 444
Query: 1084 EPPRDVEAYIHRSGRTGRAGNSGIAVMLYDPRRSNFSRIERESGVKFEHVSAPQPADVAK 905
EPPRDVEAYIHRSGRTGRAGNSG+AVML+DPRRSN S+IERESGVKFEHVSAPQPAD+AK
Sbjct: 445 EPPRDVEAYIHRSGRTGRAGNSGVAVMLFDPRRSNISKIERESGVKFEHVSAPQPADIAK 504
Query: 904 AVGFDAAETITKVSDSVIPIFKSAAEDLLSSSGLSPVEXXXXXXXXXAGYTEIKNRSLLT 725
+ G +AA TIT+VSDSVIP FKSAAE+LL++SGLS VE +GYTEIK+RSLL
Sbjct: 505 SAGVEAAGTITQVSDSVIPAFKSAAEELLNTSGLSAVELLAKALAKASGYTEIKSRSLLA 564
Query: 724 SMENYVTVQLEAGKPVYTPSFAFSILRRFLPEEKIDSVKGLSLTADGRGAVFDVPSEDVD 545
S++N+VTV LEAGKP+YTPSFA+ +LRRFLPE+K+DS+KGL+LTADG GAVFDV +ED+D
Sbjct: 565 SLDNHVTVLLEAGKPIYTPSFAYGVLRRFLPEDKVDSIKGLALTADGNGAVFDVATEDLD 624
Query: 544 SFLAGQENAADVSIEVLKALPTLQERVDS 458
+FLAGQENAA+VS+EVLKALP LQER S
Sbjct: 625 AFLAGQENAANVSLEVLKALPRLQERDQS 653
>ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223550005|gb|EEF51492.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 690
Score = 841 bits (2173), Expect = 0.0
Identities = 424/565 (75%), Positives = 494/565 (87%)
Frame = -3
Query: 2152 IASNKKQKKQKIXXXXXXXXXXXXXXXXDPNAVENFRISKPLREMLKSKGIEALFPIQAM 1973
+ + KK KK KI PNA+ +RIS+ LRE LKSKGI++LFPIQAM
Sbjct: 76 LKTKKKNKKAKIADENEDGEVETAEEDH-PNAISKYRISESLREKLKSKGIQSLFPIQAM 134
Query: 1972 TFDTILDGSDMVGRARTGQGKTLAFVLPILESLTNGPAKTSRKTGYGRSPTVLVLLPTRE 1793
TFD ILDGSD+VGRARTGQGKTLAFVLPILES+TNG AK SRKTGYGR P+VLVLLPTRE
Sbjct: 135 TFDDILDGSDLVGRARTGQGKTLAFVLPILESITNGHAKESRKTGYGRPPSVLVLLPTRE 194
Query: 1792 LANQVHADFEVYGKAVGLNSTCLYGGSPYHPQENALKRGVDVVIGTPGRIKDHIERGNLD 1613
LA+QV DF+VYG+++GL S CLYGG+ YHPQE +LKRGVD+V+GTPGR+KDHIERGN++
Sbjct: 195 LASQVFDDFKVYGESLGLTSCCLYGGASYHPQEMSLKRGVDIVVGTPGRVKDHIERGNIN 254
Query: 1612 LSSLKFRVLDEADEMLRMGFVDDVELILGKVKDLTQVQTLLFSATLPSWVQNISKRFLKP 1433
LS LKFRVLDEADEMLRMGFV+DVELILGKV+D+++VQTLLFSATLP WV+ IS RFLK
Sbjct: 255 LSYLKFRVLDEADEMLRMGFVEDVELILGKVEDVSKVQTLLFSATLPEWVKQISSRFLKA 314
Query: 1432 SKKTADLVGNEKMKASANVRHIVLPCSSNARSQLIPDIIRCYSSGGRTIIFTETKDSASE 1253
SKKT DLVGNEKMKAS NVRHI+LPCS++A Q+IPDIIRCYSSGGRTIIFTE ++SA+E
Sbjct: 315 SKKTIDLVGNEKMKASTNVRHIILPCSASAIPQVIPDIIRCYSSGGRTIIFTEKRESANE 374
Query: 1252 LAGLLPDARALHGDIQQATREVTLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPR 1073
LAGLL ARALHG+IQQ+ REVTL GFRSGKF+TLVATNVAARGLDINDVQLIIQCEPPR
Sbjct: 375 LAGLLHGARALHGEIQQSQREVTLSGFRSGKFLTLVATNVAARGLDINDVQLIIQCEPPR 434
Query: 1072 DVEAYIHRSGRTGRAGNSGIAVMLYDPRRSNFSRIERESGVKFEHVSAPQPADVAKAVGF 893
DVEAYIHRSGRTGRAGN+G+AVMLYDPRRSN S+IERESGVKFEH++APQPAD+A+AVG
Sbjct: 435 DVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNISKIERESGVKFEHITAPQPADIAQAVGA 494
Query: 892 DAAETITKVSDSVIPIFKSAAEDLLSSSGLSPVEXXXXXXXXXAGYTEIKNRSLLTSMEN 713
AAE IT+VSDS++P FKSAAEDLL+SSGLS VE AGYTEIK+RSLL+SMEN
Sbjct: 495 VAAEKITQVSDSIVPAFKSAAEDLLNSSGLSAVELLAKALANAAGYTEIKSRSLLSSMEN 554
Query: 712 YVTVQLEAGKPVYTPSFAFSILRRFLPEEKIDSVKGLSLTADGRGAVFDVPSEDVDSFLA 533
+VT+ LEAG+P+YTPSFAF +LRRFLPE+K++SVKG++LTADG+GAVFDV + D+D+FLA
Sbjct: 555 HVTLLLEAGRPIYTPSFAFGVLRRFLPEDKVESVKGMTLTADGKGAVFDVAAADIDTFLA 614
Query: 532 GQENAADVSIEVLKALPTLQERVDS 458
GQ+NAA+VS+E+LKALP LQE+ S
Sbjct: 615 GQDNAANVSLEILKALPPLQEKDQS 639
>ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|222859536|gb|EEE97083.1|
predicted protein [Populus trichocarpa]
Length = 652
Score = 840 bits (2170), Expect = 0.0
Identities = 426/566 (75%), Positives = 484/566 (85%)
Frame = -3
Query: 2164 LGQPIASNKKQKKQKIXXXXXXXXXXXXXXXXDPNAVENFRISKPLREMLKSKGIEALFP 1985
LG+P+ KK KK K+ PNAV FRIS+PLRE LK +GIEALFP
Sbjct: 32 LGEPVNLKKKSKKAKVVEEEEDEEEVKAED---PNAVTRFRISEPLREALKKRGIEALFP 88
Query: 1984 IQAMTFDTILDGSDMVGRARTGQGKTLAFVLPILESLTNGPAKTSRKTGYGRSPTVLVLL 1805
IQA TF+ IL+G D+VGRARTGQGKTLAFVLPILESL NGPAK SRKTGYGR P+VLVLL
Sbjct: 89 IQARTFEDILNGCDLVGRARTGQGKTLAFVLPILESLVNGPAKASRKTGYGRPPSVLVLL 148
Query: 1804 PTRELANQVHADFEVYGKAVGLNSTCLYGGSPYHPQENALKRGVDVVIGTPGRIKDHIER 1625
PTRELA QV DF+VYG AVGLNS C+YGG+ Y PQE ALKRGVD+V+GTPGRIKDHIE+
Sbjct: 149 PTRELATQVFEDFKVYGGAVGLNSCCVYGGASYQPQEFALKRGVDIVVGTPGRIKDHIEK 208
Query: 1624 GNLDLSSLKFRVLDEADEMLRMGFVDDVELILGKVKDLTQVQTLLFSATLPSWVQNISKR 1445
GN+DLS LKFRVLDE+DEMLRMGFV+DVELILGKV+D+ +VQTLLFSATLP WV+NIS R
Sbjct: 209 GNIDLSLLKFRVLDESDEMLRMGFVEDVELILGKVEDVRKVQTLLFSATLPDWVKNISSR 268
Query: 1444 FLKPSKKTADLVGNEKMKASANVRHIVLPCSSNARSQLIPDIIRCYSSGGRTIIFTETKD 1265
FLKP+KKT DLVGNEKMKAS NVRHIVLPCS+ A Q+IPD+I CY SGGRTIIFTE ++
Sbjct: 269 FLKPTKKTIDLVGNEKMKASTNVRHIVLPCSTAAMPQVIPDVISCYGSGGRTIIFTEKRE 328
Query: 1264 SASELAGLLPDARALHGDIQQATREVTLKGFRSGKFMTLVATNVAARGLDINDVQLIIQC 1085
SA+ELAGLLP ARALHG+IQQ+ REVTL GFRSGKF+TLVATNVAARGLDINDVQLIIQC
Sbjct: 329 SANELAGLLPGARALHGEIQQSKREVTLSGFRSGKFLTLVATNVAARGLDINDVQLIIQC 388
Query: 1084 EPPRDVEAYIHRSGRTGRAGNSGIAVMLYDPRRSNFSRIERESGVKFEHVSAPQPADVAK 905
EPP DVEAYIHRSGRTGRAGNSG+AVMLYDPRRSN S+I+RESGVKFEH++AP+ D+AK
Sbjct: 389 EPPNDVEAYIHRSGRTGRAGNSGVAVMLYDPRRSNISKIQRESGVKFEHITAPRAEDIAK 448
Query: 904 AVGFDAAETITKVSDSVIPIFKSAAEDLLSSSGLSPVEXXXXXXXXXAGYTEIKNRSLLT 725
A G AAETIT+VSDSVIP FKSAAE+LLS+SGLS VE GYTEIK+RSLLT
Sbjct: 449 AAGVGAAETITQVSDSVIPAFKSAAENLLSTSGLSAVELLAKALAKATGYTEIKSRSLLT 508
Query: 724 SMENYVTVQLEAGKPVYTPSFAFSILRRFLPEEKIDSVKGLSLTADGRGAVFDVPSEDVD 545
SM+N+VT+ LE+GKP+YTPSFAFS++RR LPE+K++SV G+SLTADG GAVFDV EDVD
Sbjct: 509 SMDNHVTLLLESGKPIYTPSFAFSVMRRILPEDKVESVTGMSLTADGNGAVFDVKKEDVD 568
Query: 544 SFLAGQENAADVSIEVLKALPTLQER 467
+FLA QENAA V+IEV+KALP+LQER
Sbjct: 569 TFLAAQENAAGVNIEVVKALPSLQER 594
>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
Length = 697
Score = 840 bits (2169), Expect = 0.0
Identities = 420/566 (74%), Positives = 489/566 (86%), Gaps = 5/566 (0%)
Frame = -3
Query: 2149 ASNKKQKKQKIXXXXXXXXXXXXXXXXD-----PNAVENFRISKPLREMLKSKGIEALFP 1985
+ NKK+KK+K+ + PNA+ NFRIS+PLRE LK KGIE+LFP
Sbjct: 84 SQNKKKKKKKVVKSEEKEQPLLVTEPKEEKKDDPNAISNFRISEPLREKLKEKGIESLFP 143
Query: 1984 IQAMTFDTILDGSDMVGRARTGQGKTLAFVLPILESLTNGPAKTSRKTGYGRSPTVLVLL 1805
IQAMTFDT+LDGSD+VGRARTGQGKTLAFVLPILESL NGPAK++RKTGYGR+P+VLVLL
Sbjct: 144 IQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLINGPAKSARKTGYGRTPSVLVLL 203
Query: 1804 PTRELANQVHADFEVYGKAVGLNSTCLYGGSPYHPQENALKRGVDVVIGTPGRIKDHIER 1625
PTRELA QVHADFEVYG A+GL+S CLYGG+PY QE L+RGVD+VIGTPGR+KDHIE+
Sbjct: 204 PTRELACQVHADFEVYGGAMGLSSCCLYGGAPYQGQELKLRRGVDIVIGTPGRVKDHIEK 263
Query: 1624 GNLDLSSLKFRVLDEADEMLRMGFVDDVELILGKVKDLTQVQTLLFSATLPSWVQNISKR 1445
GN+DLS LKFRVLDEADEMLRMGFV+DVE+ILGKV+++ +VQTLLFSATLP WV+ I+ +
Sbjct: 264 GNIDLSQLKFRVLDEADEMLRMGFVEDVEMILGKVENVNKVQTLLFSATLPDWVKQIALK 323
Query: 1444 FLKPSKKTADLVGNEKMKASANVRHIVLPCSSNARSQLIPDIIRCYSSGGRTIIFTETKD 1265
FLKP KKTADLVGN KMKAS NVRHIVLPC+S+AR+QLIPDIIRCYSSGGRTI+FTETK+
Sbjct: 324 FLKPDKKTADLVGNTKMKASTNVRHIVLPCTSSARAQLIPDIIRCYSSGGRTIVFTETKE 383
Query: 1264 SASELAGLLPDARALHGDIQQATREVTLKGFRSGKFMTLVATNVAARGLDINDVQLIIQC 1085
AS+LAG+L A+ALHGDIQQ+TREVTL GFRSGKFMTLVATNVAARGLDINDVQLIIQC
Sbjct: 384 CASQLAGILNGAKALHGDIQQSTREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQC 443
Query: 1084 EPPRDVEAYIHRSGRTGRAGNSGIAVMLYDPRRSNFSRIERESGVKFEHVSAPQPADVAK 905
EPPRDVEAYIHRSGRTGRAGN+G+AVMLYDP+RSN RIERESGVKFEHVSAPQP D+AK
Sbjct: 444 EPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKRSNIPRIERESGVKFEHVSAPQPDDIAK 503
Query: 904 AVGFDAAETITKVSDSVIPIFKSAAEDLLSSSGLSPVEXXXXXXXXXAGYTEIKNRSLLT 725
AV +AAE I +VSDSV+P FKSAAE+LL+SSGL +E GYT++K RSLLT
Sbjct: 504 AVSGEAAEMIIQVSDSVVPAFKSAAEELLNSSGLPVIELLAKALAKAVGYTDVKQRSLLT 563
Query: 724 SMENYVTVQLEAGKPVYTPSFAFSILRRFLPEEKIDSVKGLSLTADGRGAVFDVPSEDVD 545
SMENYVT+ LE GKP+YT S+ +SILRRFLPEEK+++VKGLSLTADG G VFDVP++D+D
Sbjct: 564 SMENYVTLVLETGKPIYTQSYGYSILRRFLPEEKVEAVKGLSLTADGNGVVFDVPAKDLD 623
Query: 544 SFLAGQENAADVSIEVLKALPTLQER 467
+L GQENA++V +EV+K LP LQ++
Sbjct: 624 IYLNGQENASNVCLEVVKTLPQLQQK 649
>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
Length = 713
Score = 839 bits (2168), Expect = 0.0
Identities = 423/536 (78%), Positives = 480/536 (89%)
Frame = -3
Query: 2065 PNAVENFRISKPLREMLKSKGIEALFPIQAMTFDTILDGSDMVGRARTGQGKTLAFVLPI 1886
PNAV RIS+PLR LK KGIE+LFPIQAMTFD +LDGSD+VGRARTGQGKTLAFVLPI
Sbjct: 128 PNAVSKLRISEPLRLKLKEKGIESLFPIQAMTFDLVLDGSDLVGRARTGQGKTLAFVLPI 187
Query: 1885 LESLTNGPAKTSRKTGYGRSPTVLVLLPTRELANQVHADFEVYGKAVGLNSTCLYGGSPY 1706
LESL NGP K+SRKTGYGR+P+VLVLLPTRELA +VHADFEVYG A+GL+S CLYGG+PY
Sbjct: 188 LESLINGPTKSSRKTGYGRTPSVLVLLPTRELACRVHADFEVYGGAMGLSSCCLYGGAPY 247
Query: 1705 HPQENALKRGVDVVIGTPGRIKDHIERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILG 1526
+ QE L+RGVD+VIGTPGR+KDHIERGN+DLS LKFRVLDEADEMLRMGFV+DVELILG
Sbjct: 248 NTQEIKLRRGVDIVIGTPGRVKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILG 307
Query: 1525 KVKDLTQVQTLLFSATLPSWVQNISKRFLKPSKKTADLVGNEKMKASANVRHIVLPCSSN 1346
KV+++ +VQTLLFSATLP WV++I+ +FLKP KKTADLVGN KMKAS NVRHIVLPCS+
Sbjct: 308 KVENVNKVQTLLFSATLPDWVKHIAAQFLKPDKKTADLVGNTKMKASTNVRHIVLPCSAP 367
Query: 1345 ARSQLIPDIIRCYSSGGRTIIFTETKDSASELAGLLPDARALHGDIQQATREVTLKGFRS 1166
ARSQLIPDIIRCYSSGGRTIIFTETK+SAS+LAGLLP ARALHGDIQQA REVTL GFRS
Sbjct: 368 ARSQLIPDIIRCYSSGGRTIIFTETKESASQLAGLLPGARALHGDIQQAQREVTLFGFRS 427
Query: 1165 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGIAVMLYDPRR 986
GKFMTLVATNVAARGLDINDVQLIIQCE PR+VE+YIHRSGRTGRAGN+G+A LYDP+R
Sbjct: 428 GKFMTLVATNVAARGLDINDVQLIIQCEFPREVESYIHRSGRTGRAGNTGVAGTLYDPKR 487
Query: 985 SNFSRIERESGVKFEHVSAPQPADVAKAVGFDAAETITKVSDSVIPIFKSAAEDLLSSSG 806
SN S+IERESGVKFEH+SAP+P D+AKAVG +AAE IT+VSDSVIP FK AE+LL SSG
Sbjct: 488 SNISKIERESGVKFEHISAPRPDDIAKAVGGEAAEMITQVSDSVIPAFKETAEELLKSSG 547
Query: 805 LSPVEXXXXXXXXXAGYTEIKNRSLLTSMENYVTVQLEAGKPVYTPSFAFSILRRFLPEE 626
L+ VE GYTEIK RSLLTSMENYVT+ LE GKP++TPSFA+ ILRRFLPEE
Sbjct: 548 LTVVELLAKALAKAVGYTEIKQRSLLTSMENYVTLLLEIGKPIFTPSFAYGILRRFLPEE 607
Query: 625 KIDSVKGLSLTADGRGAVFDVPSEDVDSFLAGQENAADVSIEVLKALPTLQERVDS 458
K+++VKGLSLTADG GAVFDVP+ED++++L+GQENAA+VS+EVLKALP LQ+R S
Sbjct: 608 KVEAVKGLSLTADGNGAVFDVPAEDLNTYLSGQENAANVSLEVLKALPRLQQRDQS 663