BLASTX nr result

ID: Cimicifuga21_contig00000219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000219
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173787.1| PREDICTED: 60S ribosomal protein L29-1-like,...   110   2e-22
ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatu...   110   2e-22
dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]                 110   3e-22
ref|XP_002312342.1| predicted protein [Populus trichocarpa] gi|1...   110   3e-22
ref|XP_002276776.1| PREDICTED: 60S ribosomal protein L29-1 [Viti...   109   5e-22

>ref|XP_004173787.1| PREDICTED: 60S ribosomal protein L29-1-like, partial [Cucumis
           sativus]
          Length = 85

 Score =  110 bits (276), Expect = 2e-22
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = -3

Query: 550 EMAKSKNHTAHNQSHKAHKNGIKKPRRHRHASTKGMDPKFLRNQRYARKHNNK 392
           EMAKSKNHTAHNQSHKAHKNGIKKPR+HRH STKGMDPKFLRNQRYA+KHN K
Sbjct: 24  EMAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK 76


>ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatula]
           gi|355510808|gb|AES91950.1| 60S ribosomal protein L29
           [Medicago truncatula]
          Length = 445

 Score =  110 bits (276), Expect = 2e-22
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -3

Query: 562 RIWREMAKSKNHTAHNQSHKAHKNGIKKPRRHRHASTKGMDPKFLRNQRYARKHNNK 392
           ++  EMAKSKNHTAHNQS+KAHKNGIKKP+RHRH STKGMDPKFLRNQRYARKHN K
Sbjct: 380 KVLNEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 436



 Score =  109 bits (273), Expect = 4e-22
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = -3

Query: 550 EMAKSKNHTAHNQSHKAHKNGIKKPRRHRHASTKGMDPKFLRNQRYARKHNNK 392
           EMAKSKNHTAHNQS+KAHKNGIKKP+RHRH STKGMDPKFLRNQRYARKHN K
Sbjct: 136 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 188


>dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]
          Length = 61

 Score =  110 bits (274), Expect = 3e-22
 Identities = 48/52 (92%), Positives = 51/52 (98%)
 Frame = -3

Query: 547 MAKSKNHTAHNQSHKAHKNGIKKPRRHRHASTKGMDPKFLRNQRYARKHNNK 392
           MAKSKNHTAHNQSHKAH+NGIKKPR+HRH ST+GMDPKFLRNQRYARKHNNK
Sbjct: 1   MAKSKNHTAHNQSHKAHRNGIKKPRKHRHTSTRGMDPKFLRNQRYARKHNNK 52


>ref|XP_002312342.1| predicted protein [Populus trichocarpa] gi|118484518|gb|ABK94134.1|
           unknown [Populus trichocarpa]
           gi|222852162|gb|EEE89709.1| predicted protein [Populus
           trichocarpa]
          Length = 61

 Score =  110 bits (274), Expect = 3e-22
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = -3

Query: 547 MAKSKNHTAHNQSHKAHKNGIKKPRRHRHASTKGMDPKFLRNQRYARKHNNK 392
           MAKSKNHTAHNQSHKAHKNGIKKP+RHRH STKGMDPKFLRNQRYARKHN K
Sbjct: 1   MAKSKNHTAHNQSHKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK 52


>ref|XP_002276776.1| PREDICTED: 60S ribosomal protein L29-1 [Vitis vinifera]
           gi|147802163|emb|CAN65958.1| hypothetical protein
           VITISV_007494 [Vitis vinifera]
           gi|296083268|emb|CBI22904.3| unnamed protein product
           [Vitis vinifera]
          Length = 61

 Score =  109 bits (272), Expect = 5e-22
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 547 MAKSKNHTAHNQSHKAHKNGIKKPRRHRHASTKGMDPKFLRNQRYARKHNNK 392
           MAKSKNHTAHNQS+KAHKNGIKKPR+HRHASTKGMDPKFLRNQRYARKHN K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPRKHRHASTKGMDPKFLRNQRYARKHNKK 52


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