BLASTX nr result

ID: Cimicifuga21_contig00000217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000217
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x...   159   6e-37
ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine ma...   156   5e-36
ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein ...   156   5e-36
ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycin...   156   5e-36
ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arab...   156   7e-36

>gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
           gi|2267569|gb|AAB63582.1| glycine-rich RNA binding
           protein 2 [Pelargonium x hortorum]
          Length = 166

 Score =  159 bits (403), Expect = 6e-37
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = -1

Query: 732 MASADVEYRCFVGGLAWATDDHSLEKAFSAYGDVVESKIINDRETGRSRGFGFVTFSSEK 553
           MASADVEYRCFVGGLAWATDDH+LE+AFS YG+VVESKIINDRETGRSRGFGFVTFS+EK
Sbjct: 1   MASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEK 60

Query: 552 SMKDAIESMNGQELDGRNITVNEAQ 478
           SM DAIE MNGQ LDGRNITVNEAQ
Sbjct: 61  SMNDAIEGMNGQNLDGRNITVNEAQ 85


>ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
           gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich
           RNA-binding protein [Glycine max]
          Length = 160

 Score =  156 bits (395), Expect = 5e-36
 Identities = 74/85 (87%), Positives = 82/85 (96%)
 Frame = -1

Query: 732 MASADVEYRCFVGGLAWATDDHSLEKAFSAYGDVVESKIINDRETGRSRGFGFVTFSSEK 553
           MASADVEYRCFVGGLAWATDDH+LE+AFS YG++VE+KIINDRETGRSRGFGFVTF+SE+
Sbjct: 1   MASADVEYRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQ 60

Query: 552 SMKDAIESMNGQELDGRNITVNEAQ 478
           SMKDAI +MNGQ LDGRNITVNEAQ
Sbjct: 61  SMKDAIGAMNGQNLDGRNITVNEAQ 85


>ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
           max]
          Length = 140

 Score =  156 bits (395), Expect = 5e-36
 Identities = 76/85 (89%), Positives = 80/85 (94%)
 Frame = -1

Query: 732 MASADVEYRCFVGGLAWATDDHSLEKAFSAYGDVVESKIINDRETGRSRGFGFVTFSSEK 553
           MASA VEYRCFVGGLAWATDDH+LEKAFS YG++VESKIINDRETGRSRGFGFVTF+SE 
Sbjct: 1   MASAYVEYRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASEN 60

Query: 552 SMKDAIESMNGQELDGRNITVNEAQ 478
           SMKDAIE MNGQ LDGRNITVNEAQ
Sbjct: 61  SMKDAIEGMNGQNLDGRNITVNEAQ 85


>ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
           gi|255625591|gb|ACU13140.1| unknown [Glycine max]
          Length = 156

 Score =  156 bits (395), Expect = 5e-36
 Identities = 76/85 (89%), Positives = 80/85 (94%)
 Frame = -1

Query: 732 MASADVEYRCFVGGLAWATDDHSLEKAFSAYGDVVESKIINDRETGRSRGFGFVTFSSEK 553
           MASADVEYRCFVGGLAWATD++ LEKAFS YGDVVESKIINDRETGRSRGFGFVTF+SE 
Sbjct: 1   MASADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASED 60

Query: 552 SMKDAIESMNGQELDGRNITVNEAQ 478
           SM+DAIE MNGQ LDGRNITVNEAQ
Sbjct: 61  SMRDAIEGMNGQNLDGRNITVNEAQ 85


>ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
           lyrata] gi|297326231|gb|EFH56651.1| hypothetical protein
           ARALYDRAFT_481034 [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  156 bits (394), Expect = 7e-36
 Identities = 76/85 (89%), Positives = 79/85 (92%)
 Frame = -1

Query: 732 MASADVEYRCFVGGLAWATDDHSLEKAFSAYGDVVESKIINDRETGRSRGFGFVTFSSEK 553
           MASADVEYRCFVGGLAWATDD +LE AFS YGDVV+SKIINDRETGRSRGFGFVTF  EK
Sbjct: 1   MASADVEYRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 552 SMKDAIESMNGQELDGRNITVNEAQ 478
           SMKDAIE MNGQELDGR+ITVNEAQ
Sbjct: 61  SMKDAIEGMNGQELDGRSITVNEAQ 85


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