BLASTX nr result
ID: Cimicifuga21_contig00000216
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000216
(1233 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof... 388 e-105
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof... 388 e-105
emb|CBI28651.3| unnamed protein product [Vitis vinifera] 388 e-105
ref|XP_002466555.1| hypothetical protein SORBIDRAFT_01g009860 [S... 385 e-104
ref|XP_003553769.1| PREDICTED: translational activator GCN1-like... 384 e-104
>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
Length = 2461
Score = 388 bits (997), Expect = e-105
Identities = 220/326 (67%), Positives = 239/326 (73%), Gaps = 10/326 (3%)
Frame = -3
Query: 949 SVEKGRLLLLIQSTHHLWHFWYP*YTGLRERSAETKKKAAQIAGNVRSFVTGPNDMIPYI 770
S++ L LL+ H GLRERSAETKKKAAQI GN+ S VT P DMIPYI
Sbjct: 1400 SIDAPSLALLVPIVHR----------GLRERSAETKKKAAQIVGNMCSLVTEPKDMIPYI 1449
Query: 769 GLLLPEVKKLLADRIPKVRSVAPVLLDLLLKEWERSISQIWSHGY*IQLKPIIVTFNALE 590
GLLLPEVKK+L D IP+VRSVA L L++ LK
Sbjct: 1450 GLLLPEVKKVLVDPIPEVRSVAARALGSLIRGMGEENFPDLVSWLLDTLKSDASNVERSG 1509
Query: 589 LLKGLSEVLAALGKEYLDNILPDIIRNCSHQRAS----------YFPRSLGFSFQNYLPQ 440
+GLSEVLAALG EY +++LPDIIRNCSHQRAS Y PRSLG FQNYL Q
Sbjct: 1510 AAQGLSEVLAALGTEYFEHLLPDIIRNCSHQRASVRDGYLTLFKYLPRSLGLQFQNYLQQ 1569
Query: 439 VLPPILDGLADENESVRDSALSTGHVFVEHYATTSLPLLLPAVEDGIFNDSRRIRQSSVE 260
VLP ILDGLADENESVRD+ALS GHV VEHYATTSLPLLLPAVEDGIFND+ RIRQSSVE
Sbjct: 1570 VLPAILDGLADENESVRDAALSAGHVLVEHYATTSLPLLLPAVEDGIFNDNWRIRQSSVE 1629
Query: 259 LLGNLLFKVAGTSGKAILEGGSDDEGASTEAQGRAIIEVLGRDKCNEVLAALYMV*TDVS 80
LLG+LLFKVAGTSGKA+LEGGSDDEGASTEA GRAIIE LGRDK NEVLAALYMV DVS
Sbjct: 1630 LLGDLLFKVAGTSGKALLEGGSDDEGASTEAHGRAIIEGLGRDKRNEVLAALYMVRADVS 1689
Query: 79 LSVRQAALHAWKILVANIPKTLKEIM 2
+SVRQAALH WK +VAN PKTL+EIM
Sbjct: 1690 ISVRQAALHVWKTIVANTPKTLREIM 1715
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/169 (39%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Frame = -2
Query: 1058 QMAWEALSRVIGSVPKE-----VLPSYIKLVRDAVSTSKDKERRKRKTTFINSINAPSLA 894
Q A + + +GSV K ++P+ + + D +K +TTF+NSI+APSLA
Sbjct: 1348 QSAGQMALQQVGSVIKNPEISALVPTLLMGLTDPNDYTKYSLDILLQTTFVNSIDAPSLA 1407
Query: 893 LLVPIVH-GVKGKKCRD*KEGSSDCGE-CALIRDWTE*HDSLHWI--XXXXXXXXXXXXX 726
LLVPIVH G++ + K+ + G C+L+ TE D + +I
Sbjct: 1408 LLVPIVHRGLRERSAETKKKAAQIVGNMCSLV---TEPKDMIPYIGLLLPEVKKVLVDPI 1464
Query: 725 XXXXXXXXXALGSLIKGMGEEHFPDLVSWLLDTIKANNSNV*CSGATQG 579
ALGSLI+GMGEE+FPDLVSWLLDT+K++ SNV SGA QG
Sbjct: 1465 PEVRSVAARALGSLIRGMGEENFPDLVSWLLDTLKSDASNVERSGAAQG 1513
Score = 73.6 bits (179), Expect = 1e-10
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -2
Query: 1055 MAWEALSRVIGSVPKEVLPSYIKLVRDAVSTSKDKERRKRK 933
+AWEALSRV SVPKEVLPSYIK+VRDAVSTS+DKERRK+K
Sbjct: 2004 VAWEALSRVTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKK 2044
>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
Length = 2613
Score = 388 bits (997), Expect = e-105
Identities = 220/326 (67%), Positives = 239/326 (73%), Gaps = 10/326 (3%)
Frame = -3
Query: 949 SVEKGRLLLLIQSTHHLWHFWYP*YTGLRERSAETKKKAAQIAGNVRSFVTGPNDMIPYI 770
S++ L LL+ H GLRERSAETKKKAAQI GN+ S VT P DMIPYI
Sbjct: 1552 SIDAPSLALLVPIVHR----------GLRERSAETKKKAAQIVGNMCSLVTEPKDMIPYI 1601
Query: 769 GLLLPEVKKLLADRIPKVRSVAPVLLDLLLKEWERSISQIWSHGY*IQLKPIIVTFNALE 590
GLLLPEVKK+L D IP+VRSVA L L++ LK
Sbjct: 1602 GLLLPEVKKVLVDPIPEVRSVAARALGSLIRGMGEENFPDLVSWLLDTLKSDASNVERSG 1661
Query: 589 LLKGLSEVLAALGKEYLDNILPDIIRNCSHQRAS----------YFPRSLGFSFQNYLPQ 440
+GLSEVLAALG EY +++LPDIIRNCSHQRAS Y PRSLG FQNYL Q
Sbjct: 1662 AAQGLSEVLAALGTEYFEHLLPDIIRNCSHQRASVRDGYLTLFKYLPRSLGLQFQNYLQQ 1721
Query: 439 VLPPILDGLADENESVRDSALSTGHVFVEHYATTSLPLLLPAVEDGIFNDSRRIRQSSVE 260
VLP ILDGLADENESVRD+ALS GHV VEHYATTSLPLLLPAVEDGIFND+ RIRQSSVE
Sbjct: 1722 VLPAILDGLADENESVRDAALSAGHVLVEHYATTSLPLLLPAVEDGIFNDNWRIRQSSVE 1781
Query: 259 LLGNLLFKVAGTSGKAILEGGSDDEGASTEAQGRAIIEVLGRDKCNEVLAALYMV*TDVS 80
LLG+LLFKVAGTSGKA+LEGGSDDEGASTEA GRAIIE LGRDK NEVLAALYMV DVS
Sbjct: 1782 LLGDLLFKVAGTSGKALLEGGSDDEGASTEAHGRAIIEGLGRDKRNEVLAALYMVRADVS 1841
Query: 79 LSVRQAALHAWKILVANIPKTLKEIM 2
+SVRQAALH WK +VAN PKTL+EIM
Sbjct: 1842 ISVRQAALHVWKTIVANTPKTLREIM 1867
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/169 (39%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Frame = -2
Query: 1058 QMAWEALSRVIGSVPKE-----VLPSYIKLVRDAVSTSKDKERRKRKTTFINSINAPSLA 894
Q A + + +GSV K ++P+ + + D +K +TTF+NSI+APSLA
Sbjct: 1500 QSAGQMALQQVGSVIKNPEISALVPTLLMGLTDPNDYTKYSLDILLQTTFVNSIDAPSLA 1559
Query: 893 LLVPIVH-GVKGKKCRD*KEGSSDCGE-CALIRDWTE*HDSLHWI--XXXXXXXXXXXXX 726
LLVPIVH G++ + K+ + G C+L+ TE D + +I
Sbjct: 1560 LLVPIVHRGLRERSAETKKKAAQIVGNMCSLV---TEPKDMIPYIGLLLPEVKKVLVDPI 1616
Query: 725 XXXXXXXXXALGSLIKGMGEEHFPDLVSWLLDTIKANNSNV*CSGATQG 579
ALGSLI+GMGEE+FPDLVSWLLDT+K++ SNV SGA QG
Sbjct: 1617 PEVRSVAARALGSLIRGMGEENFPDLVSWLLDTLKSDASNVERSGAAQG 1665
Score = 73.6 bits (179), Expect = 1e-10
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -2
Query: 1055 MAWEALSRVIGSVPKEVLPSYIKLVRDAVSTSKDKERRKRK 933
+AWEALSRV SVPKEVLPSYIK+VRDAVSTS+DKERRK+K
Sbjct: 2156 VAWEALSRVTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKK 2196
>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
Length = 2636
Score = 388 bits (997), Expect = e-105
Identities = 220/326 (67%), Positives = 239/326 (73%), Gaps = 10/326 (3%)
Frame = -3
Query: 949 SVEKGRLLLLIQSTHHLWHFWYP*YTGLRERSAETKKKAAQIAGNVRSFVTGPNDMIPYI 770
S++ L LL+ H GLRERSAETKKKAAQI GN+ S VT P DMIPYI
Sbjct: 1575 SIDAPSLALLVPIVHR----------GLRERSAETKKKAAQIVGNMCSLVTEPKDMIPYI 1624
Query: 769 GLLLPEVKKLLADRIPKVRSVAPVLLDLLLKEWERSISQIWSHGY*IQLKPIIVTFNALE 590
GLLLPEVKK+L D IP+VRSVA L L++ LK
Sbjct: 1625 GLLLPEVKKVLVDPIPEVRSVAARALGSLIRGMGEENFPDLVSWLLDTLKSDASNVERSG 1684
Query: 589 LLKGLSEVLAALGKEYLDNILPDIIRNCSHQRAS----------YFPRSLGFSFQNYLPQ 440
+GLSEVLAALG EY +++LPDIIRNCSHQRAS Y PRSLG FQNYL Q
Sbjct: 1685 AAQGLSEVLAALGTEYFEHLLPDIIRNCSHQRASVRDGYLTLFKYLPRSLGLQFQNYLQQ 1744
Query: 439 VLPPILDGLADENESVRDSALSTGHVFVEHYATTSLPLLLPAVEDGIFNDSRRIRQSSVE 260
VLP ILDGLADENESVRD+ALS GHV VEHYATTSLPLLLPAVEDGIFND+ RIRQSSVE
Sbjct: 1745 VLPAILDGLADENESVRDAALSAGHVLVEHYATTSLPLLLPAVEDGIFNDNWRIRQSSVE 1804
Query: 259 LLGNLLFKVAGTSGKAILEGGSDDEGASTEAQGRAIIEVLGRDKCNEVLAALYMV*TDVS 80
LLG+LLFKVAGTSGKA+LEGGSDDEGASTEA GRAIIE LGRDK NEVLAALYMV DVS
Sbjct: 1805 LLGDLLFKVAGTSGKALLEGGSDDEGASTEAHGRAIIEGLGRDKRNEVLAALYMVRADVS 1864
Query: 79 LSVRQAALHAWKILVANIPKTLKEIM 2
+SVRQAALH WK +VAN PKTL+EIM
Sbjct: 1865 ISVRQAALHVWKTIVANTPKTLREIM 1890
Score = 89.4 bits (220), Expect = 2e-15
Identities = 67/169 (39%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Frame = -2
Query: 1058 QMAWEALSRVIGSVPKE-----VLPSYIKLVRDAVSTSKDKERRKRKTTFINSINAPSLA 894
Q A + + +GSV K ++P+ + + D +K +TTF+NSI+APSLA
Sbjct: 1523 QSAGQMALQQVGSVIKNPEISALVPTLLMGLTDPNDYTKYSLDILLQTTFVNSIDAPSLA 1582
Query: 893 LLVPIVH-GVKGKKCRD*KEGSSDCGE-CALIRDWTE*HDSLHWI--XXXXXXXXXXXXX 726
LLVPIVH G++ + K+ + G C+L+ TE D + +I
Sbjct: 1583 LLVPIVHRGLRERSAETKKKAAQIVGNMCSLV---TEPKDMIPYIGLLLPEVKKVLVDPI 1639
Query: 725 XXXXXXXXXALGSLIKGMGEEHFPDLVSWLLDTIKANNSNV*CSGATQG 579
ALGSLI+GMGEE+FPDLVSWLLDT+K++ SNV SGA QG
Sbjct: 1640 PEVRSVAARALGSLIRGMGEENFPDLVSWLLDTLKSDASNVERSGAAQG 1688
Score = 73.6 bits (179), Expect = 1e-10
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -2
Query: 1055 MAWEALSRVIGSVPKEVLPSYIKLVRDAVSTSKDKERRKRK 933
+AWEALSRV SVPKEVLPSYIK+VRDAVSTS+DKERRK+K
Sbjct: 2179 VAWEALSRVTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKK 2219
>ref|XP_002466555.1| hypothetical protein SORBIDRAFT_01g009860 [Sorghum bicolor]
gi|241920409|gb|EER93553.1| hypothetical protein
SORBIDRAFT_01g009860 [Sorghum bicolor]
Length = 2468
Score = 385 bits (989), Expect = e-104
Identities = 217/326 (66%), Positives = 241/326 (73%), Gaps = 10/326 (3%)
Frame = -3
Query: 949 SVEKGRLLLLIQSTHHLWHFWYP*YTGLRERSAETKKKAAQIAGNVRSFVTGPNDMIPYI 770
S++ L LL+ H GLRER ETKKKAAQI GN+ S VT P DMIPYI
Sbjct: 1499 SIDAPSLALLVPIVHR----------GLRERGVETKKKAAQIVGNMSSLVTEPKDMIPYI 1548
Query: 769 GLLLPEVKKLLADRIPKVRSVAPVLLDLLLKEWERSISQIWSHGY*IQLKPIIVTFNALE 590
GLLLPEVKK+L D IP+VR+VA L L+ I LK
Sbjct: 1549 GLLLPEVKKVLVDPIPEVRAVAARALGSLISGMGEEIFPDLVPWLLDTLKSDNSNVERSG 1608
Query: 589 LLKGLSEVLAALGKEYLDNILPDIIRNCSHQRAS----------YFPRSLGFSFQNYLPQ 440
+GLSEVLAALG++Y D+ILPDIIRNCSHQ+AS Y PRSLG FQNYL
Sbjct: 1609 AAQGLSEVLAALGQDYFDHILPDIIRNCSHQKASVRDGHLTLFRYLPRSLGGVFQNYLQA 1668
Query: 439 VLPPILDGLADENESVRDSALSTGHVFVEHYATTSLPLLLPAVEDGIFNDSRRIRQSSVE 260
VLP ILDGLADENESVRD+ALS GHVFVEHYATTSLPLLLPA+EDGIF+D+ RIRQSSVE
Sbjct: 1669 VLPAILDGLADENESVRDAALSAGHVFVEHYATTSLPLLLPAIEDGIFSDNWRIRQSSVE 1728
Query: 259 LLGNLLFKVAGTSGKAILEGGSDDEGASTEAQGRAIIEVLGRDKCNEVLAALYMV*TDVS 80
LLG+LLFKVAGTSGKAILEGGSDDEGASTEAQGRAIIEVLGR+K NEVLAA+YMV +DVS
Sbjct: 1729 LLGDLLFKVAGTSGKAILEGGSDDEGASTEAQGRAIIEVLGREKRNEVLAAIYMVRSDVS 1788
Query: 79 LSVRQAALHAWKILVANIPKTLKEIM 2
L+VRQAALH WK +VAN P+TLKEIM
Sbjct: 1789 LTVRQAALHVWKTIVANTPRTLKEIM 1814
Score = 62.0 bits (149), Expect = 3e-07
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = -2
Query: 1052 AWEALSRVIGSVPKEVLPSYIKLVRDAVSTSKDKERRKRK 933
A EA SRV SVPKE LP+YIKLVRDAVST++DKERR+RK
Sbjct: 2090 ALEAFSRVATSVPKEQLPTYIKLVRDAVSTARDKERRRRK 2129
>ref|XP_003553769.1| PREDICTED: translational activator GCN1-like [Glycine max]
Length = 2870
Score = 384 bits (987), Expect = e-104
Identities = 218/329 (66%), Positives = 243/329 (73%), Gaps = 13/329 (3%)
Frame = -3
Query: 949 SVEKGRLLLLIQSTHHLWHFWYP*YTGLRERSAETKKKAAQIAGNVRSFVTGPNDMIPYI 770
S++ L LL+ H GLRERSA+TKK+AAQI GN+ S VT P DMIPYI
Sbjct: 1809 SIDAPSLALLVPIVHR----------GLRERSADTKKRAAQIVGNMCSLVTEPKDMIPYI 1858
Query: 769 GLLLPEVKKLLADRIPKVRSVAPVLLDLLLKEW-ERSISQI--WSHGY*IQLKPIIVTFN 599
GLLLPEVKK+L D IP+VRSVA + L+ E + + W LK
Sbjct: 1859 GLLLPEVKKVLVDPIPEVRSVAARAIGSLIGGMGEENFPDLVPWLFD---TLKSDNSNVE 1915
Query: 598 ALELLKGLSEVLAALGKEYLDNILPDIIRNCSHQRAS----------YFPRSLGFSFQNY 449
+GLSEVLAALG E+ +++LPDIIRNCSHQ+AS Y PRSLG FQNY
Sbjct: 1916 RSGAAQGLSEVLAALGIEFFEHVLPDIIRNCSHQKASVRDGYLTLFKYLPRSLGVQFQNY 1975
Query: 448 LPQVLPPILDGLADENESVRDSALSTGHVFVEHYATTSLPLLLPAVEDGIFNDSRRIRQS 269
LPQVLP ILDGLADENESVRD+AL GHV VEHYATTSLPLLLPAVEDGIFNDS RIRQS
Sbjct: 1976 LPQVLPAILDGLADENESVRDAALGAGHVLVEHYATTSLPLLLPAVEDGIFNDSWRIRQS 2035
Query: 268 SVELLGNLLFKVAGTSGKAILEGGSDDEGASTEAQGRAIIEVLGRDKCNEVLAALYMV*T 89
SVELLG+LLFKVAGTSGKA+LEGGSDDEG+STEA GRAIIE+LGRDK NEVLAALYMV
Sbjct: 2036 SVELLGDLLFKVAGTSGKALLEGGSDDEGSSTEAHGRAIIEILGRDKRNEVLAALYMVRA 2095
Query: 88 DVSLSVRQAALHAWKILVANIPKTLKEIM 2
DVSLSVRQAALH WK +VAN PKTL+EIM
Sbjct: 2096 DVSLSVRQAALHVWKTIVANTPKTLREIM 2124
Score = 87.8 bits (216), Expect = 5e-15
Identities = 66/169 (39%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Frame = -2
Query: 1058 QMAWEALSRVIGSVPKE-----VLPSYIKLVRDAVSTSKDKERRKRKTTFINSINAPSLA 894
Q A + + +GSV K ++P+ +K + D +K +TTF+NSI+APSLA
Sbjct: 1757 QSAGQMALQQVGSVIKNPEISALVPTLLKGLSDPNEHTKYSLDILLQTTFVNSIDAPSLA 1816
Query: 893 LLVPIVH-GVKGKKCRD*KEGSSDCGE-CALIRDWTE*HDSLHWI--XXXXXXXXXXXXX 726
LLVPIVH G++ + K + G C+L+ TE D + +I
Sbjct: 1817 LLVPIVHRGLRERSADTKKRAAQIVGNMCSLV---TEPKDMIPYIGLLLPEVKKVLVDPI 1873
Query: 725 XXXXXXXXXALGSLIKGMGEEHFPDLVSWLLDTIKANNSNV*CSGATQG 579
A+GSLI GMGEE+FPDLV WL DT+K++NSNV SGA QG
Sbjct: 1874 PEVRSVAARAIGSLIGGMGEENFPDLVPWLFDTLKSDNSNVERSGAAQG 1922
Score = 74.7 bits (182), Expect = 4e-11
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -2
Query: 1055 MAWEALSRVIGSVPKEVLPSYIKLVRDAVSTSKDKERRKRK 933
+AWEALSRVI SVPKEVLPSYIKLVRDAVSTS+DKERRK+K
Sbjct: 2413 VAWEALSRVIISVPKEVLPSYIKLVRDAVSTSRDKERRKKK 2453