BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000213
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro...   194   2e-47
sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   192   4e-47
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro...   192   5e-47
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro...   189   3e-46
ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|2...   185   6e-45

>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  194 bits (492), Expect = 2e-47
 Identities = 99/134 (73%), Positives = 115/134 (85%)
 Frame = +1

Query: 106 LTKPISSLYLKSQVSSELGFLTSQLSGIKISTDGFGSQNHAKPISSAPLRPLLQPVARRI 285
           +T   + L+ +++ SS+LGFLTSQLSGI+IS++   S      IS+APLRP LQPVARRI
Sbjct: 19  MTTSSTKLHFRTKPSSDLGFLTSQLSGIRISSNH--SLISPSSISTAPLRPSLQPVARRI 76

Query: 286 CPLTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKALKTIEKNGL 465
           CP TGKK+N+ N VSFSNHKTKKLQFVNLQYK++WWEAGKR+VKLRLSTKALKTIEKNGL
Sbjct: 77  CPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGL 136

Query: 466 DAVAKKAGIDLRKE 507
           DAVAKKAGIDLRKE
Sbjct: 137 DAVAKKAGIDLRKE 150


>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  192 bits (489), Expect = 4e-47
 Identities = 107/159 (67%), Positives = 123/159 (77%), Gaps = 5/159 (3%)
 Frame = +1

Query: 46  MATASSGV-----LLSSHSTLQLPKLTKPISSLYLKSQVSSELGFLTSQLSGIKISTDGF 210
           MAT  +G+     ++SSH T  + K          +S++SSEL F+TSQLSG+KIS+  F
Sbjct: 1   MATMVAGISLRGPVMSSHRTFSVTKRAS-----LPQSKLSSELSFVTSQLSGLKISSTHF 55

Query: 211 GSQNHAKPISSAPLRPLLQPVARRICPLTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIW 390
            S +   P+S  P +P LQPVARRICP TGKKSNRANKVS SNHKTKKLQFVNLQYKRIW
Sbjct: 56  ISSS--APLS-VPFKPSLQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIW 112

Query: 391 WEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 507
           WEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K+
Sbjct: 113 WEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 151


>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  192 bits (488), Expect = 5e-47
 Identities = 98/134 (73%), Positives = 115/134 (85%)
 Frame = +1

Query: 106 LTKPISSLYLKSQVSSELGFLTSQLSGIKISTDGFGSQNHAKPISSAPLRPLLQPVARRI 285
           +T   + L+ +++ +S+LGFLTSQLSGI+IS++   S      IS+APLRP LQPVARRI
Sbjct: 19  MTTSSTKLHFRTKPNSDLGFLTSQLSGIRISSNH--SLISPASISTAPLRPSLQPVARRI 76

Query: 286 CPLTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKALKTIEKNGL 465
           CP TGKK+N+ N VSFSNHKTKKLQFVNLQYK++WWEAGKR+VKLRLSTKALKTIEKNGL
Sbjct: 77  CPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGL 136

Query: 466 DAVAKKAGIDLRKE 507
           DAVAKKAGIDLRKE
Sbjct: 137 DAVAKKAGIDLRKE 150


>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
           vinifera]
          Length = 146

 Score =  189 bits (481), Expect = 3e-46
 Identities = 105/157 (66%), Positives = 120/157 (76%), Gaps = 3/157 (1%)
 Frame = +1

Query: 46  MATASSG---VLLSSHSTLQLPKLTKPISSLYLKSQVSSELGFLTSQLSGIKISTDGFGS 216
           MA A +G   V+ +S   L+LP L K        ++++S+L F+TSQ  GIKIS      
Sbjct: 1   MAAAVAGGGLVVCNSSHKLRLPSLKK--------AKMASDLAFVTSQFGGIKISCTHLQL 52

Query: 217 QNHAKPISSAPLRPLLQPVARRICPLTGKKSNRANKVSFSNHKTKKLQFVNLQYKRIWWE 396
            N   PI SAPL   L+PVARR+CP TGKK+N+ANKVSFSNHKTKKLQFVNLQYK+IWWE
Sbjct: 53  PN---PIPSAPLTLPLRPVARRVCPFTGKKANKANKVSFSNHKTKKLQFVNLQYKKIWWE 109

Query: 397 AGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 507
           AGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Sbjct: 110 AGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 146


>ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|222864614|gb|EEF01745.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  185 bits (470), Expect = 6e-45
 Identities = 98/120 (81%), Positives = 105/120 (87%), Gaps = 1/120 (0%)
 Frame = +1

Query: 151 SELGFLTSQLSGIKISTDGFGSQNHAKPISSAPLRPLLQPV-ARRICPLTGKKSNRANKV 327
           SE+GF+TSQLSGI+IS       N  KP+S AP  P LQPV ARRICP TGKK+NRANKV
Sbjct: 6   SEIGFVTSQLSGIRIS------YNPPKPLS-APFSPALQPVIARRICPFTGKKANRANKV 58

Query: 328 SFSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 507
           SFSNHKTKKLQFVNLQYKR+WWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Sbjct: 59  SFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 118