BLASTX nr result
ID: Cimicifuga21_contig00000196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000196
(1523 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 108 3e-21
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 107 6e-21
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 107 6e-21
ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 104 7e-20
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 103 9e-20
>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 428
Score = 108 bits (271), Expect = 3e-21
Identities = 108/429 (25%), Positives = 202/429 (47%), Gaps = 11/429 (2%)
Frame = +3
Query: 153 DRLSNLPCPIRSKIISLLPTTDAIRTSILSTKWRYACSSLSTMWF--RLLSQNKIDSKVK 326
DR+S L + KI+S LP +A+RTS+LS KWRY +++ + F + +S S++
Sbjct: 7 DRISYLLGDVIDKILSHLPIREAVRTSVLSNKWRYKWATIPNLVFDKQCVSATSKCSELF 66
Query: 327 KDFKN----IVDKTVIGHDETNIDNFSLLVRVDGKHISFVDIDKWISVVVKHNVRDIFLF 494
D + I+D+ ++ + I+ F + R IS +D+WI + K +++++ L
Sbjct: 67 LDMEGKLMEIIDQVLLLYSGP-INKFQIS-RCGVNLISETALDRWIFHLTKRSIKELVLQ 124
Query: 495 ASSRKPGKLPYCFFTCSTLRKLALYHIKLKLPTTIR-FPVLKYFLLEGVRFYDDGAMDKL 671
S RK K+P+C F+C +L L LY+ LK P+TI LK L+ V A + L
Sbjct: 125 ISERKLYKIPWCLFSCQSLHHLTLYYCLLKPPSTIEGLKNLKSLDLDHVSM-SQYAFENL 183
Query: 672 FSRSTCPVLEDLIIGACNIHT-LCICIPSLKYLNLFVASVDPKFKLSIPTLQEIDYHGVP 848
S+CP+LE+L + + T + I P+LK L++ D +S ++DY V
Sbjct: 184 I--SSCPLLENLTLTELDGFTQINIHAPNLKVLDICGKFED----ISFDNTFQLDYVFVD 237
Query: 849 LDISSATFSSLRKATFEVLGHQCTSRLL---LGLHNVETLRLKSYFLEYLSSDRLFFYNC 1019
L + + S+ + H S LL LH++ L + YFL+YL++ +
Sbjct: 238 LSLYLNSESNQSRL------HGSPSNLLNFFAHLHHIHGLVINGYFLKYLAAGAVPVKLP 291
Query: 1020 NXXXXXXXXXXXXIYRTENQFQMISFLIRKFCGLQTVHVYVEELQRDGHFSRDYRPPSDL 1199
+ + + R L+ ++++ + ++ + + D+
Sbjct: 292 TPCINLTYLWFSINFYDFKEISTALCVFRSSPNLKELNIFAKHEKKTIVLAPAFFCWEDI 351
Query: 1200 CTSLDFMNRHLKRVEIKSFGGTEYEFSLVQYLLLSASILEEMNISYSREMDASKRISIIK 1379
+ R ++ V I+ G + E +++LLL + +LE+M + + + + ++
Sbjct: 352 FLEPSMLTR-VRHVGIEGISGIKSELDFMRFLLLHSPVLEKMRVKPNFNVGS----KLMS 406
Query: 1380 KLLSFRRVS 1406
+LL F+R S
Sbjct: 407 ELLRFKRAS 415
>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 428
Score = 107 bits (268), Expect = 6e-21
Identities = 117/434 (26%), Positives = 186/434 (42%), Gaps = 16/434 (3%)
Frame = +3
Query: 153 DRLSNLPCPIRSKIISLLPTTDAIRTSILSTKWRYACSSLSTMWF--RLLSQNKIDSKV- 323
DR+S+LP I +I+S+LP +A+RTSILSTKWRY ++L + F + +S D V
Sbjct: 17 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 76
Query: 324 KKDFKNIVDKTVIGHDETNIDNFSLLVRVDGKHISFVDIDKWISVVVKHNVRDIFLFASS 503
K I+D ++ H I F L R + I DID+W + + V++ L
Sbjct: 77 KSKLSRIIDHVLLLHSGP-IKKFKLSHR---ELIGVTDIDRWTLHLTRRPVKEFVLEIWK 132
Query: 504 RKPGKLPYCFFTCSTLRKLALYHIKLKLPTTIR-FPVLKYFLLEGVRFYDDGAMDKLFSR 680
+ K+P C F+C L L L++ L P+T + F LK L+ V D A + L
Sbjct: 133 GQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQD-AFENLI-- 189
Query: 681 STCPVLEDLIIGACNIHTLCICIPSLKYLNLFVASVDPKFKLSIPTLQEIDYHGVPLDIS 860
STCP+LE L + + YLN+ P LQ D G DIS
Sbjct: 190 STCPLLERLTL---------MNFDGFNYLNIHA-----------PNLQFFDIGGKFEDIS 229
Query: 861 SATFSSLRKATFEVLG---------HQCTSRL---LLGLHNVETLRLKSYFLEYLSSDRL 1004
S L + + H TS L L+ L ++ L ++SYFL+YL+ +
Sbjct: 230 FKNTSQLAVVSIGLYVNFESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAV 289
Query: 1005 FFYNCNXXXXXXXXXXXXIYRTENQFQMISFLIRKFCGLQTVHVYVEELQRDGHFSRDYR 1184
+ + L R L+ + + ++ +
Sbjct: 290 PVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAHHAD 349
Query: 1185 PPSDLCTSLDFMNRHLKRVEIKSFGGTEYEFSLVQYLLLSASILEEMNISYSREMDASKR 1364
D+ LD+ ++ V I G + E + ++LL + +LE M + + ++AS
Sbjct: 350 CWEDV--YLDWPVMRVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPA--LNASP- 404
Query: 1365 ISIIKKLLSFRRVS 1406
++K+LL RR S
Sbjct: 405 -ELVKELLRLRRAS 417
>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 660
Score = 107 bits (268), Expect = 6e-21
Identities = 117/434 (26%), Positives = 186/434 (42%), Gaps = 16/434 (3%)
Frame = +3
Query: 153 DRLSNLPCPIRSKIISLLPTTDAIRTSILSTKWRYACSSLSTMWF--RLLSQNKIDSKV- 323
DR+S+LP I +I+S+LP +A+RTSILSTKWRY ++L + F + +S D V
Sbjct: 249 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 308
Query: 324 KKDFKNIVDKTVIGHDETNIDNFSLLVRVDGKHISFVDIDKWISVVVKHNVRDIFLFASS 503
K I+D ++ H I F L R + I DID+W + + V++ L
Sbjct: 309 KSKLSRIIDHVLLLHSGP-IKKFKLSHR---ELIGVTDIDRWTLHLTRRPVKEFVLEIWK 364
Query: 504 RKPGKLPYCFFTCSTLRKLALYHIKLKLPTTIR-FPVLKYFLLEGVRFYDDGAMDKLFSR 680
+ K+P C F+C L L L++ L P+T + F LK L+ V D A + L
Sbjct: 365 GQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQD-AFENLI-- 421
Query: 681 STCPVLEDLIIGACNIHTLCICIPSLKYLNLFVASVDPKFKLSIPTLQEIDYHGVPLDIS 860
STCP+LE L + + YLN+ P LQ D G DIS
Sbjct: 422 STCPLLERLTL---------MNFDGFNYLNIHA-----------PNLQFFDIGGKFEDIS 461
Query: 861 SATFSSLRKATFEVLG---------HQCTSRL---LLGLHNVETLRLKSYFLEYLSSDRL 1004
S L + + H TS L L+ L ++ L ++SYFL+YL+ +
Sbjct: 462 FKNTSQLAVVSIGLYVNFESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAV 521
Query: 1005 FFYNCNXXXXXXXXXXXXIYRTENQFQMISFLIRKFCGLQTVHVYVEELQRDGHFSRDYR 1184
+ + L R L+ + + ++ +
Sbjct: 522 PVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAHHAD 581
Query: 1185 PPSDLCTSLDFMNRHLKRVEIKSFGGTEYEFSLVQYLLLSASILEEMNISYSREMDASKR 1364
D+ LD+ ++ V I G + E + ++LL + +LE M + + ++AS
Sbjct: 582 CWEDV--YLDWPVMRVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPA--LNASP- 636
Query: 1365 ISIIKKLLSFRRVS 1406
++K+LL RR S
Sbjct: 637 -ELVKELLRLRRAS 649
>ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355477859|gb|AES59062.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 449
Score = 104 bits (259), Expect = 7e-20
Identities = 109/445 (24%), Positives = 193/445 (43%), Gaps = 25/445 (5%)
Frame = +3
Query: 150 MDRLSNLPCPIRSKIISLLPTTDAIRTSILSTKWRYACSSLSTMWFR----LLSQNKIDS 317
+DR+S LP + +I+SL+P +A+RTS+LS+ WR +L + F ++ +K S
Sbjct: 18 LDRISCLPGHVIDQILSLMPIKEAVRTSVLSSSWRNKWYTLPNLVFNKHCISVAASKYTS 77
Query: 318 KVKKDFKNIVDKTVIGHDE-----TNIDNFSLLVRVDGKHISFVDIDKWISVVVKHNVRD 482
+ F IVD ++ H DN + L+RV D+ +W+ + + ++++
Sbjct: 78 VINNKFLRIVDHVLLQHSGPINKFMLSDNENCLIRV----CDVSDVHRWVLHLSRRSIKE 133
Query: 483 IFLFASSRKPGKLPYCFFTCSTLRKLALYHIKLKLPTTIR-FPVLKYFLLEGVRFYDDGA 659
+ L K K+P F+C +LR L+L +LKLPTT F L+Y LE V D
Sbjct: 134 LLLHFWLDKRYKIPLSLFSCQSLRHLSLSCCQLKLPTTFEGFKNLQYLHLEEVTLAQDDF 193
Query: 660 MDKLFSRSTCPVLEDLII------GACNIHTLCICIPSLKYLNLFVASVDPKFKLSIPTL 821
+ + S CP+L+ L++ N+H P+L + D F+ S
Sbjct: 194 ENMI---SGCPLLDHLVLMKIDGFSQINVHA-----PNLSTFQFYGKFEDISFQNS---- 241
Query: 822 QEIDYHGVPLDISSATFSSLRKATFEVLGHQCTSRLL---LGLHNVETLRLKSYFLEYLS 992
+ V +D+S S ++ H C+S LL +++ L + YFL+YL+
Sbjct: 242 --SQIYTVYVDLSIYLNSKSNQSKL----HGCSSNLLKFFAHQPHIQFLEIGYYFLKYLA 295
Query: 993 SDRLFFYNCNXXXXXXXXXXXXIYRTENQFQMISFLIRKFCGLQTVHVY--VEELQRDGH 1166
+D + + + L+R L+ + ++ +EE
Sbjct: 296 ADDVPVKLPAPCISLCELSLCINFNDLKEISAALCLLRSSPNLKKLEIFARIEE------ 349
Query: 1167 FSRDYRPPSDLCTSLDF----MNRHLKRVEIKSFGGTEYEFSLVQYLLLSASILEEMNIS 1334
P+ C F M ++ V I G E +++LL + +LE+M +
Sbjct: 350 -ETVLLTPTSYCWEDIFSGPAMPIQVQHVTIDGISGIRSELDFIRFLLRYSPVLEKMIVK 408
Query: 1335 YSREMDASKRISIIKKLLSFRRVSD 1409
+ + + +I +LL F+R SD
Sbjct: 409 HV----VNVQPELITELLRFKRASD 429
>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
[Medicago truncatula]
Length = 467
Score = 103 bits (258), Expect = 9e-20
Identities = 117/424 (27%), Positives = 187/424 (44%), Gaps = 31/424 (7%)
Frame = +3
Query: 153 DRLSNLPCPIRSKIISLLPTTDAIRTSILSTKWRYACSSLSTMWFRLLSQNKIDSKVKKD 332
D +S+LP I I+S L T +A+RTSIL+TKWRY + L FR S K +SK
Sbjct: 23 DMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFR-DSSPKRNSKSPDC 81
Query: 333 FKNIVDKTVIGHDETNIDNFSLLVRVDGKHISFVDIDKWISVVVKHNVRDIFL-FASSRK 509
++VD+ + H I L + + + + +S + H+V D+ L S
Sbjct: 82 LVDLVDQLL--HKSNRIK--KLFIELPVTIVDAGKVSSMLSSALMHDVHDLTLNLESENS 137
Query: 510 PGKLPYCFFTCSTLRKL-ALYHIKLKLPTTIRFPVLKYFLLEGVRFYDDGAMDKLFSRST 686
LP F +L KL ++ +P I FP LK V F ++ + +LF S
Sbjct: 138 RFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSAQRLF--SG 195
Query: 687 CPVLEDLIIGAC---NIHTLCICIPSLKYLNLFV--ASVDPK---FKLSIPTLQEIDYHG 842
CPVL+DL C NI+ + + IP+LK L++F +S+D FK+ L + Y
Sbjct: 196 CPVLQDLSFEKCYWVNIN-ISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLLSLSYKS 254
Query: 843 VP-LDISSATFSSLRKATFEVLGHQCTS-----------RLLLGLHNVETLRLKSYFLEY 986
P ++ +S+ A + LG C L L +VE+LRL ++
Sbjct: 255 NPTINCFLVNSTSIVDANID-LGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDQTIQC 313
Query: 987 LSSDRLFFYNCNXXXXXXXXXXXXIYRTENQFQMISFLIRKFCGLQTVHVYVEELQRDGH 1166
L+ + + ++ + ++++ ++RK L+ +H+Y L
Sbjct: 314 LNYAKSALH---LLPSFKNLTRLEVHFDDPSCEVLADILRKSPKLEFLHIYGVHLVSCSR 370
Query: 1167 F---------SRDYRPPSDLCTSLDFMNRHLKRVEIKSFGGTEYEFSLVQYLLLSASILE 1319
F S D+ S C LK +I F G E E LV++LL + ++L
Sbjct: 371 FSSGSYLSLDSEDWTSDSLPCC----FKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLR 426
Query: 1320 EMNI 1331
EMNI
Sbjct: 427 EMNI 430