BLASTX nr result

ID: Cimicifuga21_contig00000195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000195
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...    93   3e-17
ref|XP_002279582.1| PREDICTED: uncharacterized protein LOC100263...    88   9e-16
ref|XP_002323311.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002298436.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002526721.1| conserved hypothetical protein [Ricinus comm...    83   3e-14

>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like
           [Cucumis sativus]
          Length = 1159

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/93 (52%), Positives = 65/93 (69%)
 Frame = -2

Query: 423 MLQLFFAVAFSAVPLTLYVPPVRSLNLFVESLESIIRHTIFHTSRAYPRIRHGCTRILAS 244
           MLQLFFAVAFSAVPLTLYVPP+RSL+LFVE+LE ++ HT  HT RAYPR R   +R+ AS
Sbjct: 1   MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTAIHTIRAYPRFRLAFSRLFAS 60

Query: 243 LXXXXXXREKFRSNFNKFLFWGVFVSIIICFLW 145
           +         FR ++++++    FVS++    W
Sbjct: 61  V---------FRVSYSRYV--APFVSVLHFSQW 82


>ref|XP_002279582.1| PREDICTED: uncharacterized protein LOC100263680 isoform 1 [Vitis
           vinifera]
          Length = 67

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = -2

Query: 423 MLQLFFAVAFSAVPLTLYVPPVRSLNLFVESLESIIRHTIFHTSRAYPRIRHGCTRIL 250
           MLQLFFAVAFS+VPLTLY+PP+RSLNLFVE++E I+R T  HT R YPR+R    RIL
Sbjct: 1   MLQLFFAVAFSSVPLTLYIPPLRSLNLFVETMEDIVRETSMHTDRLYPRVRQAFFRIL 58


>ref|XP_002323311.1| predicted protein [Populus trichocarpa] gi|222867941|gb|EEF05072.1|
           predicted protein [Populus trichocarpa]
          Length = 66

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = -2

Query: 423 MLQLFFAVAFSAVPLTLYVPPVRSLNLFVESLESIIRHTIFHTSRAYPRIRHGCTRILAS 244
           MLQLFFAVAFSAVPLTLYVPP+RSLNLFVE++E ++R T  +T RAYPRIR   +R   +
Sbjct: 1   MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETMEDVLRQTSLYTVRAYPRIRLVFSRFFRN 60

Query: 243 L 241
           L
Sbjct: 61  L 61


>ref|XP_002298436.1| predicted protein [Populus trichocarpa] gi|222845694|gb|EEE83241.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/58 (65%), Positives = 48/58 (82%)
 Frame = -2

Query: 423 MLQLFFAVAFSAVPLTLYVPPVRSLNLFVESLESIIRHTIFHTSRAYPRIRHGCTRIL 250
           MLQLFF VAFSAVPLTLY+PP+RSLNLFVE++E ++R +  +T+R YPR RH  +R L
Sbjct: 1   MLQLFFTVAFSAVPLTLYIPPMRSLNLFVETMEGLLRESSVYTTRLYPRARHAWSRFL 58


>ref|XP_002526721.1| conserved hypothetical protein [Ricinus communis]
           gi|223533910|gb|EEF35635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 93

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/61 (62%), Positives = 52/61 (85%)
 Frame = -2

Query: 423 MLQLFFAVAFSAVPLTLYVPPVRSLNLFVESLESIIRHTIFHTSRAYPRIRHGCTRILAS 244
           MLQ+FFAVAFSAVPLTLYVPP+RSLNLF+E++E ++R +  +T +AYPRIR   +R+ ++
Sbjct: 1   MLQIFFAVAFSAVPLTLYVPPIRSLNLFLETIEELLRQSTSYTIQAYPRIRLAFSRLFSN 60

Query: 243 L 241
           L
Sbjct: 61  L 61


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