BLASTX nr result

ID: Cimicifuga21_contig00000173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000173
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236831.1| uncharacterized protein LOC100305798 [Glycin...   196   3e-48
gb|ADR71241.1| 60S ribosomal protein L34A [Hevea brasiliensis]        196   4e-48
ref|XP_002324052.1| predicted protein [Populus trichocarpa] gi|1...   196   4e-48
ref|XP_002522429.1| 60S ribosomal protein L34, putative [Ricinus...   195   5e-48
gb|ABK93580.1| unknown [Populus trichocarpa] gi|118485116|gb|ABK...   195   7e-48

>ref|NP_001236831.1| uncharacterized protein LOC100305798 [Glycine max]
           gi|356568648|ref|XP_003552522.1| PREDICTED: 60S
           ribosomal protein L34-like [Glycine max]
           gi|255626627|gb|ACU13658.1| unknown [Glycine max]
          Length = 120

 Score =  196 bits (498), Expect = 3e-48
 Identities = 100/120 (83%), Positives = 104/120 (86%)
 Frame = -1

Query: 581 MVQRLTYRKRHSYATKSNQNRVVKTPGGKVIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 402
           MVQRLTYRKRHSYATKSNQ+RVVKTPGGK++YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 401 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFXXXXXXXXXXXXXXXKAKERQASKS 222
           EYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF               KAKE+QASKS
Sbjct: 61  EYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKS 120


>gb|ADR71241.1| 60S ribosomal protein L34A [Hevea brasiliensis]
          Length = 120

 Score =  196 bits (497), Expect = 4e-48
 Identities = 99/120 (82%), Positives = 105/120 (87%)
 Frame = -1

Query: 581 MVQRLTYRKRHSYATKSNQNRVVKTPGGKVIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 402
           MVQRLTYRKRHSYATKSNQ+RVVKTPGGK++YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 401 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFXXXXXXXXXXXXXXXKAKERQASKS 222
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAF               KAKE+QAS+S
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRS 120


>ref|XP_002324052.1| predicted protein [Populus trichocarpa] gi|118485096|gb|ABK94411.1|
           unknown [Populus trichocarpa]
           gi|222867054|gb|EEF04185.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  196 bits (497), Expect = 4e-48
 Identities = 100/120 (83%), Positives = 104/120 (86%)
 Frame = -1

Query: 581 MVQRLTYRKRHSYATKSNQNRVVKTPGGKVIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 402
           MVQRLTYRKRHSYATKSNQ+RVVKTPGGK++YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 401 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFXXXXXXXXXXXXXXXKAKERQASKS 222
           EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF               KAKE+QASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKS 120


>ref|XP_002522429.1| 60S ribosomal protein L34, putative [Ricinus communis]
           gi|223538314|gb|EEF39921.1| 60S ribosomal protein L34,
           putative [Ricinus communis]
          Length = 120

 Score =  195 bits (496), Expect = 5e-48
 Identities = 98/120 (81%), Positives = 105/120 (87%)
 Frame = -1

Query: 581 MVQRLTYRKRHSYATKSNQNRVVKTPGGKVIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 402
           MVQRLTYRKRHSYATKSNQ+R+VKTPGGK++YQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 401 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFXXXXXXXXXXXXXXXKAKERQASKS 222
           EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF               KAKE+Q+S+S
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQSSRS 120


>gb|ABK93580.1| unknown [Populus trichocarpa] gi|118485116|gb|ABK94421.1| unknown
           [Populus trichocarpa]
          Length = 120

 Score =  195 bits (495), Expect = 7e-48
 Identities = 100/120 (83%), Positives = 104/120 (86%)
 Frame = -1

Query: 581 MVQRLTYRKRHSYATKSNQNRVVKTPGGKVIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 402
           MVQRLTYRKRHSYATKSNQ+RVVKTPGGK+IYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 401 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFXXXXXXXXXXXXXXXKAKERQASKS 222
           EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF               K+KE+QASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKSKEKQASKS 120


Top