BLASTX nr result
ID: Cimicifuga21_contig00000170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00000170 (1070 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACF06446.1| 40S ribosomal protein S19 [Elaeis guineensis] 268 1e-69 ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Viti... 264 3e-68 ref|XP_002269657.1| PREDICTED: 40S ribosomal protein S19-1 [Viti... 264 3e-68 ref|XP_002305397.1| predicted protein [Populus trichocarpa] gi|2... 263 7e-68 ref|XP_002323893.1| predicted protein [Populus trichocarpa] gi|1... 263 7e-68 >gb|ACF06446.1| 40S ribosomal protein S19 [Elaeis guineensis] Length = 143 Score = 268 bits (686), Expect = 1e-69 Identities = 128/143 (89%), Positives = 134/143 (93%) Frame = +3 Query: 132 METARTVKDVSPHEFVKAYSAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAAS 311 METARTVKDVS HEFVKAY+AHLKRSGKMELPHWTDIVKTG FKELAPYDPDWYYIRAAS Sbjct: 1 METARTVKDVSAHEFVKAYAAHLKRSGKMELPHWTDIVKTGRFKELAPYDPDWYYIRAAS 60 Query: 312 MARKIYLRQGIGVGGFRKIYGGSKRNGSRPPHFCKSSGGIARHILQQLQTMNIVDLDPKG 491 MARKIYLR GIGVGGF+KIYGG KRNGSRPPHFCKSSG IARHILQQLQ M+I+D D KG Sbjct: 61 MARKIYLRHGIGVGGFQKIYGGRKRNGSRPPHFCKSSGAIARHILQQLQEMDIIDFDAKG 120 Query: 492 GRIITSSGRRDLDQVAGRIVVAP 560 GR+ITS GRRDLDQVAGR+VVAP Sbjct: 121 GRMITSQGRRDLDQVAGRVVVAP 143 >ref|XP_002284393.1| PREDICTED: 40S ribosomal protein S19-3 [Vitis vinifera] gi|147858266|emb|CAN83920.1| hypothetical protein VITISV_028810 [Vitis vinifera] gi|297733901|emb|CBI15148.3| unnamed protein product [Vitis vinifera] Length = 143 Score = 264 bits (674), Expect = 3e-68 Identities = 127/142 (89%), Positives = 133/142 (93%) Frame = +3 Query: 132 METARTVKDVSPHEFVKAYSAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAAS 311 M TARTVKDVSPHEFV AY+AHLKRSGK+ELPHWTDIVKT TFKELAPYDPDWYYIRAAS Sbjct: 1 MATARTVKDVSPHEFVNAYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAAS 60 Query: 312 MARKIYLRQGIGVGGFRKIYGGSKRNGSRPPHFCKSSGGIARHILQQLQTMNIVDLDPKG 491 MARKIYLR GIGVG FR+IYGGSKRNGSRPPHFCKSSG IARHILQQLQTMNI++LD KG Sbjct: 61 MARKIYLRGGIGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQTMNIIELDSKG 120 Query: 492 GRIITSSGRRDLDQVAGRIVVA 557 GR ITSSG+RDLDQVAGRI VA Sbjct: 121 GRRITSSGQRDLDQVAGRIAVA 142 >ref|XP_002269657.1| PREDICTED: 40S ribosomal protein S19-1 [Vitis vinifera] gi|147798403|emb|CAN70140.1| hypothetical protein VITISV_032083 [Vitis vinifera] gi|297738070|emb|CBI27271.3| unnamed protein product [Vitis vinifera] Length = 146 Score = 264 bits (674), Expect = 3e-68 Identities = 124/141 (87%), Positives = 135/141 (95%) Frame = +3 Query: 135 ETARTVKDVSPHEFVKAYSAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAASM 314 + ARTVKDVSPHEFVKAYS+HLKRSGK+ELPHWTDIVKT TFKELAPYDPDWYY+RAASM Sbjct: 5 KAARTVKDVSPHEFVKAYSSHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYVRAASM 64 Query: 315 ARKIYLRQGIGVGGFRKIYGGSKRNGSRPPHFCKSSGGIARHILQQLQTMNIVDLDPKGG 494 ARKIYLRQG+GVGGFR+IYGGSKRNGSRPPHFCKSSG IARHILQQL+ MNI++ DP+GG Sbjct: 65 ARKIYLRQGLGVGGFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLEKMNIIENDPRGG 124 Query: 495 RIITSSGRRDLDQVAGRIVVA 557 R ITSSG+RDLDQVAGRIVVA Sbjct: 125 RRITSSGQRDLDQVAGRIVVA 145 >ref|XP_002305397.1| predicted protein [Populus trichocarpa] gi|222848361|gb|EEE85908.1| predicted protein [Populus trichocarpa] Length = 143 Score = 263 bits (671), Expect = 7e-68 Identities = 125/143 (87%), Positives = 134/143 (93%) Frame = +3 Query: 132 METARTVKDVSPHEFVKAYSAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAAS 311 M TA+TVKDVSPHEFVKAYSAHLKRSGK+ELP WTDIVKT FKELAPYDPDWYYIRAAS Sbjct: 1 MATAKTVKDVSPHEFVKAYSAHLKRSGKVELPPWTDIVKTAKFKELAPYDPDWYYIRAAS 60 Query: 312 MARKIYLRQGIGVGGFRKIYGGSKRNGSRPPHFCKSSGGIARHILQQLQTMNIVDLDPKG 491 MARKIYLR G+GVG FR+IYGGS+RNGSRPPHFCKSSG +ARHILQQLQ MNI+D+DPKG Sbjct: 61 MARKIYLRGGLGVGAFRRIYGGSQRNGSRPPHFCKSSGSVARHILQQLQNMNIIDVDPKG 120 Query: 492 GRIITSSGRRDLDQVAGRIVVAP 560 GR ITSSG+RDLDQVAGRIVVAP Sbjct: 121 GRRITSSGQRDLDQVAGRIVVAP 143 >ref|XP_002323893.1| predicted protein [Populus trichocarpa] gi|118487378|gb|ABK95517.1| unknown [Populus trichocarpa] gi|222866895|gb|EEF04026.1| predicted protein [Populus trichocarpa] Length = 143 Score = 263 bits (671), Expect = 7e-68 Identities = 124/143 (86%), Positives = 135/143 (94%) Frame = +3 Query: 132 METARTVKDVSPHEFVKAYSAHLKRSGKMELPHWTDIVKTGTFKELAPYDPDWYYIRAAS 311 M TA++VKDVSPHEFVKAYSAHLKRSGK+ELP WTDIVKTG FKELAPYDPDWYY+RAAS Sbjct: 1 MATAKSVKDVSPHEFVKAYSAHLKRSGKIELPLWTDIVKTGKFKELAPYDPDWYYVRAAS 60 Query: 312 MARKIYLRQGIGVGGFRKIYGGSKRNGSRPPHFCKSSGGIARHILQQLQTMNIVDLDPKG 491 MARKIY+R G+GVG FR+IYGGSKRNGSRPPHFCKSSG IARHILQQLQ +NI+D+DPKG Sbjct: 61 MARKIYIRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQNVNIIDIDPKG 120 Query: 492 GRIITSSGRRDLDQVAGRIVVAP 560 GR ITSSG+RDLDQVAGRIVVAP Sbjct: 121 GRRITSSGQRDLDQVAGRIVVAP 143