BLASTX nr result

ID: Cimicifuga21_contig00000141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000141
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus...   311   8e-83
ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V...   311   1e-82
ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   310   2e-82
ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatu...   310   3e-82
ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus...   309   4e-82

>ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223530177|gb|EEF32086.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  311 bits (798), Expect = 8e-83
 Identities = 156/166 (93%), Positives = 164/166 (98%)
 Frame = -3

Query: 682 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 503
           MPPKFDPSQVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 502 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLDDVIEIAKVMKPR 323
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+GNISLDDVIEIAKVMKPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMKPR 120

Query: 322 SMARELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIYDGDVGIPVD 185
           SMA++L+GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDV +P+D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166


>ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera]
          Length = 166

 Score =  311 bits (797), Expect = 1e-82
 Identities = 156/166 (93%), Positives = 163/166 (98%)
 Frame = -3

Query: 682 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 503
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 502 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLDDVIEIAKVMKPR 323
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH GNISLDDVIEIAK+M+PR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 322 SMARELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIYDGDVGIPVD 185
           SMA++L+G+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDV IP+D
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166


>ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147835636|emb|CAN66258.1| hypothetical protein
           VITISV_001237 [Vitis vinifera]
          Length = 166

 Score =  310 bits (794), Expect = 2e-82
 Identities = 156/166 (93%), Positives = 162/166 (97%)
 Frame = -3

Query: 682 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 503
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 502 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLDDVIEIAKVMKPR 323
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH GNISLDDVIEIAK+M+PR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 322 SMARELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIYDGDVGIPVD 185
           SMA++L+G+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDV IP D
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPQD 166


>ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatula]
           gi|217071520|gb|ACJ84120.1| unknown [Medicago
           truncatula] gi|217075190|gb|ACJ85955.1| unknown
           [Medicago truncatula] gi|355507440|gb|AES88582.1| 60S
           ribosomal protein L12 [Medicago truncatula]
           gi|388514003|gb|AFK45063.1| unknown [Medicago
           truncatula]
          Length = 166

 Score =  310 bits (793), Expect = 3e-82
 Identities = 156/166 (93%), Positives = 161/166 (96%)
 Frame = -3

Query: 682 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 503
           MPPK DPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKLDPSQIVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 502 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLDDVIEIAKVMKPR 323
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH GNISLDDVIEIAK+MKPR
Sbjct: 61  VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMKPR 120

Query: 322 SMARELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIYDGDVGIPVD 185
           SMA+ELAGTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDV IP D
Sbjct: 121 SMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 166


>ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223541400|gb|EEF42951.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  309 bits (792), Expect = 4e-82
 Identities = 156/166 (93%), Positives = 163/166 (98%)
 Frame = -3

Query: 682 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 503
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 502 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLDDVIEIAKVMKPR 323
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+GNISLD+VIEIAKVMKPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDNVIEIAKVMKPR 120

Query: 322 SMARELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIYDGDVGIPVD 185
           SMA++L+GTVKEILGTCVSVGCTVD KDPKDLQQEI DGDV IP+D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDSKDPKDLQQEITDGDVEIPLD 166


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