BLASTX nr result

ID: Cimicifuga21_contig00000108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000108
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328982.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
gb|AFK38177.1| unknown [Lotus japonicus]                              153   3e-35
ref|XP_002520027.1| conserved hypothetical protein [Ricinus comm...   153   3e-35
ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   153   3e-35
gb|AFK34710.1| unknown [Medicago truncatula]                          153   4e-35

>ref|XP_002328982.1| predicted protein [Populus trichocarpa] gi|222839216|gb|EEE77567.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  154 bits (389), Expect = 2e-35
 Identities = 74/88 (84%), Positives = 76/88 (86%)
 Frame = +2

Query: 164 RNLSLVXXXXXXQIISQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDNDPALGH 343
           RN SLV        IS HTAKWMQDTSKKSPMELINE+PPIKVEGRIVACEGD DPALGH
Sbjct: 27  RNYSLVTNQ-----ISNHTAKWMQDTSKKSPMELINEIPPIKVEGRIVACEGDTDPALGH 81

Query: 344 PIEFICLDLKEPAVCKYCGLRYVQDYHH 427
           PIEFICLDLKEPAVCKYCGLRYVQ +HH
Sbjct: 82  PIEFICLDLKEPAVCKYCGLRYVQAHHH 109


>gb|AFK38177.1| unknown [Lotus japonicus]
          Length = 111

 Score =  153 bits (387), Expect = 3e-35
 Identities = 73/88 (82%), Positives = 76/88 (86%)
 Frame = +2

Query: 164 RNLSLVXXXXXXQIISQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDNDPALGH 343
           RN SLV        I  HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDN+PALGH
Sbjct: 29  RNFSLVAPQ-----IGNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDNNPALGH 83

Query: 344 PIEFICLDLKEPAVCKYCGLRYVQDYHH 427
           PIE+ICLDL EPAVCKYCGLRYVQD+HH
Sbjct: 84  PIEYICLDLAEPAVCKYCGLRYVQDHHH 111


>ref|XP_002520027.1| conserved hypothetical protein [Ricinus communis]
           gi|223540791|gb|EEF42351.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score =  153 bits (387), Expect = 3e-35
 Identities = 72/88 (81%), Positives = 77/88 (87%)
 Frame = +2

Query: 164 RNLSLVXXXXXXQIISQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDNDPALGH 343
           RN SLV        IS HTAKWMQDT+KKSPMELINE+PPIKVEGRIVACEGD +PALGH
Sbjct: 20  RNFSLVTSQ-----ISNHTAKWMQDTTKKSPMELINEIPPIKVEGRIVACEGDTNPALGH 74

Query: 344 PIEFICLDLKEPAVCKYCGLRYVQDYHH 427
           PIEFICLDLK+PAVCKYCGLRYVQD+HH
Sbjct: 75  PIEFICLDLKQPAVCKYCGLRYVQDHHH 102


>ref|XP_002276949.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
           mitochondrial [Vitis vinifera]
           gi|297737324|emb|CBI26525.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  153 bits (387), Expect = 3e-35
 Identities = 74/90 (82%), Positives = 77/90 (85%)
 Frame = +2

Query: 158 NMRNLSLVXXXXXXQIISQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDNDPAL 337
           N R+L LV        IS HTAKWMQDTSKKSPMELINEVPPIKVE RIVACEGD +PAL
Sbjct: 18  NSRSLCLVSGQ-----ISNHTAKWMQDTSKKSPMELINEVPPIKVEARIVACEGDTNPAL 72

Query: 338 GHPIEFICLDLKEPAVCKYCGLRYVQDYHH 427
           GHPIEFICLDLKEPAVCKYCGLRYVQD+HH
Sbjct: 73  GHPIEFICLDLKEPAVCKYCGLRYVQDHHH 102


>gb|AFK34710.1| unknown [Medicago truncatula]
          Length = 105

 Score =  153 bits (386), Expect = 4e-35
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +2

Query: 206 ISQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDNDPALGHPIEFICLDLKEPAV 385
           IS HTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGD DPALGHPIE+ICLDL EPAV
Sbjct: 32  ISNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDTDPALGHPIEYICLDLAEPAV 91

Query: 386 CKYCGLRYVQDYHH 427
           CKYCGLRYVQD+HH
Sbjct: 92  CKYCGLRYVQDHHH 105


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