BLASTX nr result

ID: Cimicifuga21_contig00000091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000091
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin...   202   3e-50
ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin...   202   6e-50
ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch...   201   1e-49
ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1...   199   4e-49
ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitoch...   196   3e-48

>ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max]
           gi|255640572|gb|ACU20571.1| unknown [Glycine max]
          Length = 143

 Score =  202 bits (515), Expect = 3e-50
 Identities = 97/104 (93%), Positives = 101/104 (97%)
 Frame = -1

Query: 657 FFEADRSQEEEKPVVYGRGWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR 478
           FFEADRS +++KPVVYGR WKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR
Sbjct: 40  FFEADRSPDDDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR 99

Query: 477 FPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKKMINAL 346
           FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRSAEMK+MINAL
Sbjct: 100 FPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMINAL 143


>ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max]
           gi|255629706|gb|ACU15202.1| unknown [Glycine max]
          Length = 142

 Score =  202 bits (513), Expect = 6e-50
 Identities = 97/104 (93%), Positives = 100/104 (96%)
 Frame = -1

Query: 657 FFEADRSQEEEKPVVYGRGWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR 478
           FFEADRS E++KPVVYGR WKA ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR
Sbjct: 39  FFEADRSPEDDKPVVYGRSWKACELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR 98

Query: 477 FPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKKMINAL 346
           FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRSAEMK+MINAL
Sbjct: 99  FPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMINAL 142


>ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1
           [Vitis vinifera] gi|225457112|ref|XP_002283459.1|
           PREDICTED: 39S ribosomal protein L47, mitochondrial
           isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3|
           unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  201 bits (510), Expect = 1e-49
 Identities = 95/104 (91%), Positives = 100/104 (96%)
 Frame = -1

Query: 657 FFEADRSQEEEKPVVYGRGWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR 478
           FFEADRS +E+KPVVYGRGWKASELRLKSWDDLHKLWY+LLKEKNMLMTQRQML +QNLR
Sbjct: 37  FFEADRSPDEDKPVVYGRGWKASELRLKSWDDLHKLWYILLKEKNMLMTQRQMLQSQNLR 96

Query: 477 FPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKKMINAL 346
           FPNPERIPKVRKSMCRIKHVLTERAIEEPD RRS EMK+MINAL
Sbjct: 97  FPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSVEMKRMINAL 140


>ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1|
           unknown [Populus trichocarpa]
           gi|222861024|gb|EEE98566.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  199 bits (506), Expect = 4e-49
 Identities = 94/104 (90%), Positives = 101/104 (97%)
 Frame = -1

Query: 657 FFEADRSQEEEKPVVYGRGWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR 478
           FFEADRSQ+E+KP+VYGR WKASELRLKSWDDL KLWYVLLKEKNMLMTQRQML+AQN R
Sbjct: 39  FFEADRSQDEDKPIVYGRSWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLHAQNFR 98

Query: 477 FPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKKMINAL 346
           FPNPER+PKVRKSMCRIKHVLTERAIEEPD+RRSAEMK+MINAL
Sbjct: 99  FPNPERLPKVRKSMCRIKHVLTERAIEEPDSRRSAEMKRMINAL 142


>ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis
           sativus] gi|449528917|ref|XP_004171448.1| PREDICTED: 39S
           ribosomal protein L47, mitochondrial-like [Cucumis
           sativus]
          Length = 143

 Score =  196 bits (498), Expect = 3e-48
 Identities = 94/104 (90%), Positives = 100/104 (96%)
 Frame = -1

Query: 657 FFEADRSQEEEKPVVYGRGWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLR 478
           FFEADRS ++ KPVVYGR WKASELRLKSWDDL+KLWYVLLKEKNMLMTQRQMLNAQNL+
Sbjct: 40  FFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLK 99

Query: 477 FPNPERIPKVRKSMCRIKHVLTERAIEEPDARRSAEMKKMINAL 346
           FPNPERIPKVRKSMCRIKHVLTERAI+EPD RRSAEMK+MINAL
Sbjct: 100 FPNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL 143


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