BLASTX nr result

ID: Cimicifuga21_contig00000089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000089
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like ...   320   3e-85
emb|CAN84167.1| hypothetical protein VITISV_018882 [Vitis vinifera]   320   3e-85
ref|XP_002274000.1| PREDICTED: 60S ribosomal protein L13-2 [Viti...   320   4e-85
emb|CAN80613.1| hypothetical protein VITISV_025451 [Vitis vinifera]   320   5e-85
ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus...   319   7e-85

>ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like [Glycine max]
          Length = 207

 Score =  320 bits (821), Expect = 3e-85
 Identities = 156/192 (81%), Positives = 167/192 (86%)
 Frame = +1

Query: 73  MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPIVHG 252
           MVKHNNVIPNGHF+KHWQNYVKTWFNQP                IFPRPTAGPLRPIVHG
Sbjct: 1   MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 253 QTLKYNMKVRAGRGFSLEELKAAGIPKKFAPTIGISVDHRRRNRSLEGLQANVQRLKTYK 432
           QTLKYNMKVRAGRGFSLEELKAAGIPKK APTIGI+VDHRR+NRSLE LQANVQRLKTYK
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLESLQANVQRLKTYK 120

Query: 433 AKLVVFPRRVRKFKAGDSSPEELATATQVQGSYLPIVQEKPTFELVKPTEEMKAFKAYAK 612
           AKLVVFPRR +K KAGDS+PEELA ATQVQGS+LPIV+EKPT ELVK T++MKAFKAY K
Sbjct: 121 AKLVVFPRRAQKVKAGDSTPEELANATQVQGSFLPIVREKPTVELVKVTDDMKAFKAYYK 180

Query: 613 LRIERVNKKHYG 648
           LR+ER NK+HYG
Sbjct: 181 LRLERTNKRHYG 192


>emb|CAN84167.1| hypothetical protein VITISV_018882 [Vitis vinifera]
          Length = 207

 Score =  320 bits (821), Expect = 3e-85
 Identities = 156/192 (81%), Positives = 167/192 (86%)
 Frame = +1

Query: 73  MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPIVHG 252
           MVKHNNV+PNGHFKKHWQNYVKTWFNQP                IFPRPT+GPLRPIVHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHG 60

Query: 253 QTLKYNMKVRAGRGFSLEELKAAGIPKKFAPTIGISVDHRRRNRSLEGLQANVQRLKTYK 432
           QTLKYNMKVRAGRGFSLEELKAAGIPKK APTIGI+VDHRRRNRSLE LQANVQRLKTYK
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYK 120

Query: 433 AKLVVFPRRVRKFKAGDSSPEELATATQVQGSYLPIVQEKPTFELVKPTEEMKAFKAYAK 612
           AKLVVFPRR RKFKAGDSS EELATATQVQG Y+PIV+EKPT ELVK T+EMK+FKAY K
Sbjct: 121 AKLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGK 180

Query: 613 LRIERVNKKHYG 648
           LR+ER+N++H G
Sbjct: 181 LRVERMNQRHVG 192


>ref|XP_002274000.1| PREDICTED: 60S ribosomal protein L13-2 [Vitis vinifera]
           gi|296085355|emb|CBI29087.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score =  320 bits (820), Expect = 4e-85
 Identities = 153/192 (79%), Positives = 165/192 (85%)
 Frame = +1

Query: 73  MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPIVHG 252
           MVKHNNV+PNGHFKKHWQNYVKTWFNQP                IFPRPT GPLRP+VHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTVGPLRPLVHG 60

Query: 253 QTLKYNMKVRAGRGFSLEELKAAGIPKKFAPTIGISVDHRRRNRSLEGLQANVQRLKTYK 432
           QTLKYNMKVRAGRGFSLEELKAAGIPKK APTIGISVDHRR+NRSLE LQANVQRLKTYK
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLESLQANVQRLKTYK 120

Query: 433 AKLVVFPRRVRKFKAGDSSPEELATATQVQGSYLPIVQEKPTFELVKPTEEMKAFKAYAK 612
           AKLVVFPRR RKFKAGDS+PEEL TATQVQG Y+P+VQEKP  ELVK T+EMK+FKAY K
Sbjct: 121 AKLVVFPRRARKFKAGDSAPEELGTATQVQGQYMPVVQEKPVVELVKVTDEMKSFKAYGK 180

Query: 613 LRIERVNKKHYG 648
           LR+ER+N++H G
Sbjct: 181 LRVERMNERHVG 192


>emb|CAN80613.1| hypothetical protein VITISV_025451 [Vitis vinifera]
          Length = 207

 Score =  320 bits (819), Expect = 5e-85
 Identities = 153/192 (79%), Positives = 165/192 (85%)
 Frame = +1

Query: 73  MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPIVHG 252
           MVKHNNV+PNGHFKKHWQNYVKTWFNQP                IFPRPT GPLRP+VHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTVGPLRPLVHG 60

Query: 253 QTLKYNMKVRAGRGFSLEELKAAGIPKKFAPTIGISVDHRRRNRSLEGLQANVQRLKTYK 432
           QTLKYNMKVRAGRGFSLEELKAAGIPKK APTIGISVDHRR+NRSLE LQANVQRLKTYK
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLESLQANVQRLKTYK 120

Query: 433 AKLVVFPRRVRKFKAGDSSPEELATATQVQGSYLPIVQEKPTFELVKPTEEMKAFKAYAK 612
           AKLVVFPRR RKFKAGDS+PEEL TATQVQG Y+P+VQEKP  ELVK T+EMK+FKAY K
Sbjct: 121 AKLVVFPRRARKFKAGDSAPEELGTATQVQGQYMPVVQEKPXVELVKVTDEMKSFKAYGK 180

Query: 613 LRIERVNKKHYG 648
           LR+ER+N++H G
Sbjct: 181 LRVERMNERHVG 192


>ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223531254|gb|EEF33097.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  319 bits (818), Expect = 7e-85
 Identities = 154/192 (80%), Positives = 168/192 (87%)
 Frame = +1

Query: 73  MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPIVHG 252
           MVKHNNV+PNGHFKKHWQNYVKTWFNQP                IFPRPTAGPLRPIVHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 253 QTLKYNMKVRAGRGFSLEELKAAGIPKKFAPTIGISVDHRRRNRSLEGLQANVQRLKTYK 432
           QTLKYNMK+RAGRGF+LEELKAAGIPKK APTIGI+VDHRR+NRSLEGLQANVQRLKTYK
Sbjct: 61  QTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYK 120

Query: 433 AKLVVFPRRVRKFKAGDSSPEELATATQVQGSYLPIVQEKPTFELVKPTEEMKAFKAYAK 612
           AKLVVFPRR RK KAGDS+PEELATATQVQG Y+PIV+EKP+ ELVK TEEMK+FKAY K
Sbjct: 121 AKLVVFPRRARKSKAGDSAPEELATATQVQGKYMPIVREKPSVELVKVTEEMKSFKAYDK 180

Query: 613 LRIERVNKKHYG 648
           LR+ER+N++H G
Sbjct: 181 LRVERMNQRHLG 192


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