BLASTX nr result

ID: Cimicifuga21_contig00000088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000088
         (1281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280924.1| PREDICTED: ethylene-responsive transcription...   211   3e-52
ref|XP_002304640.1| AP2/ERF domain-containing transcription fact...   178   3e-42
ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, puta...   171   5e-40
gb|ADE41119.1| AP2 domain class transcription factor [Malus x do...   161   4e-37
ref|XP_003621632.1| Ethylene-responsive transcription factor [Me...   159   1e-36

>ref|XP_002280924.1| PREDICTED: ethylene-responsive transcription factor ERF114-like
           [Vitis vinifera]
          Length = 315

 Score =  211 bits (537), Expect = 3e-52
 Identities = 122/225 (54%), Positives = 145/225 (64%), Gaps = 12/225 (5%)
 Frame = +1

Query: 82  SKALKVDRRHGKRPLPSDASEEKEDQKNMLSYPSYGSPPSEQDMNAMVSALAHVIG-TGQ 258
           S+A KVDRRHGKRPLPSD +EEKEDQ ++  +P Y S  S+QDM+AMVSAL  VIG T +
Sbjct: 30  SEAYKVDRRHGKRPLPSDEAEEKEDQDHI--FPVY-SARSQQDMSAMVSALTQVIGNTDK 86

Query: 259 NQ----GNPIPAS--APALMENDPSQLVQDQGSE-RKRHYRGVRQRPWGKWAAEIRDPKK 417
           N     GNP P S  +     + PSQL+QDQG++ R+RHYRGVRQRPWGKWAAEIRDP K
Sbjct: 87  NPLHDLGNPSPISHHSATTPHDQPSQLLQDQGNQLRRRHYRGVRQRPWGKWAAEIRDPNK 146

Query: 418 AARVWLGTFDTXXXXXXXXXXXXLRFKGTKAKLNFPERVQGRTDLSYYMGGQN----PNM 585
           AARVWLGTFDT            LRFKG KAKLNFPERVQGR++L Y    Q+       
Sbjct: 147 AARVWLGTFDTAEDAALAYDEAALRFKGNKAKLNFPERVQGRSELGYLTNRQDFLLPQQQ 206

Query: 586 VMARAXXXXXXXXXISQDVYPDLFQYAQLLRGGDEDLRYATQNFY 720
            +            + +  YP+L  YAQLL GG  DL +A  + Y
Sbjct: 207 QLPNPAVPPLPHPSLPRPSYPNLHHYAQLLPGGGGDLNHAMSSLY 251


>ref|XP_002304640.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222842072|gb|EEE79619.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 234

 Score =  178 bits (451), Expect = 3e-42
 Identities = 96/186 (51%), Positives = 112/186 (60%), Gaps = 15/186 (8%)
 Frame = +1

Query: 211 MNAMVSALAHVIGTGQNQGNPIPASAPALMEN------DPSQLVQDQGSERKRHYRGVRQ 372
           M+AMVSAL  V+GT  N    + ++  AL ++      D SQ VQDQ + R+RHYRGVRQ
Sbjct: 1   MSAMVSALTQVMGTTDNNPTSVQSTPYALDQSVVKDEPDQSQPVQDQENTRRRHYRGVRQ 60

Query: 373 RPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLRFKGTKAKLNFPERVQGRTDL 552
           RPWGKWAAEIRDPKKAARVWLGTFDT            L+FKGTKAKLNFPERVQGRT+ 
Sbjct: 61  RPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDKAALKFKGTKAKLNFPERVQGRTEF 120

Query: 553 SYYMGG---------QNPNMVMARAXXXXXXXXXISQDVYPDLFQYAQLLRGGDEDLRYA 705
            YYMG          Q+P  V              + D YPDL QYAQ+L   D +  Y 
Sbjct: 121 GYYMGSGTSTNVLTEQSPRPVAPPPPPPPPPPSSFAPDTYPDLLQYAQILSSNDANFPYY 180

Query: 706 TQNFYN 723
           T N +N
Sbjct: 181 TSNLFN 186


>ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, putative [Ricinus communis]
           gi|223548630|gb|EEF50121.1| AP2 domain transcription
           factor RAP2.3, putative [Ricinus communis]
          Length = 249

 Score =  171 bits (432), Expect = 5e-40
 Identities = 96/192 (50%), Positives = 113/192 (58%), Gaps = 21/192 (10%)
 Frame = +1

Query: 211 MNAMVSALAHVIGTGQNQGNP-IPASAPALMEN-------DPSQLVQDQGSERKRHYRGV 366
           M+AMVSAL+ VI T  +   P +  SAP  +E        D SQ  QDQ + R+RHYRGV
Sbjct: 1   MSAMVSALSQVIATSADDNKPTVVQSAPLAVEQSLVKEELDQSQPTQDQENTRRRHYRGV 60

Query: 367 RQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLRFKGTKAKLNFPERVQGRT 546
           RQRPWGKWAAEIRDPKKAARVWLGTFDT            L+FKGTKAKLNFPERVQG+ 
Sbjct: 61  RQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAALAYDKAALKFKGTKAKLNFPERVQGKP 120

Query: 547 DLSYYM-----------GGQNPNMVM--ARAXXXXXXXXXISQDVYPDLFQYAQLLRGGD 687
           + SY+M            GQNP ++   A +           Q+ YPDL QYAQ+L   D
Sbjct: 121 EFSYFMTTSGDSSSSISPGQNPMLMAPPASSYLPPPPPPSFPQETYPDLLQYAQILSSTD 180

Query: 688 EDLRYATQNFYN 723
               Y T N +N
Sbjct: 181 ASFPYYTSNLFN 192


>gb|ADE41119.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 245

 Score =  161 bits (407), Expect = 4e-37
 Identities = 97/193 (50%), Positives = 112/193 (58%), Gaps = 23/193 (11%)
 Frame = +1

Query: 211 MNAMVSALAHVIGTGQN----QGNPIPASAPALM---ENDPSQLVQDQGSERKRHYRGVR 369
           M+AMVSAL  VIGT +     Q NP   S  +L+   E D S+ VQDQ + R+RHYRGVR
Sbjct: 1   MSAMVSALTQVIGTTEGHAAVQPNPTSISDSSLLVKQEPDRSEPVQDQETVRRRHYRGVR 60

Query: 370 QRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLRFKGTKAKLNFPERVQGRTD 549
           QRPWGKWAAEIRDPKKAARVWLGTF+T            LRFKGTKAKLNFPERVQG+TD
Sbjct: 61  QRPWGKWAAEIRDPKKAARVWLGTFETAEDAAIAYDNAALRFKGTKAKLNFPERVQGKTD 120

Query: 550 LSYYMGG--------------QNPNMVMARAXXXXXXXXXISQ--DVYPDLFQYAQLLRG 681
               MG               Q    +M  A          SQ  + +PDL+QYAQLL  
Sbjct: 121 FGILMGSSGTTTNSSSGAASTQRTQNLMRPAGQTAPAPLITSQQPETFPDLYQYAQLLSS 180

Query: 682 GDEDLRYATQNFY 720
            D D  +   +FY
Sbjct: 181 NDAD--FCNYSFY 191


>ref|XP_003621632.1| Ethylene-responsive transcription factor [Medicago truncatula]
           gi|355496647|gb|AES77850.1| Ethylene-responsive
           transcription factor [Medicago truncatula]
          Length = 239

 Score =  159 bits (403), Expect = 1e-36
 Identities = 105/224 (46%), Positives = 127/224 (56%), Gaps = 15/224 (6%)
 Frame = +1

Query: 91  LKVD-RRHGKRPLPSDASEEKEDQKNML------SYPSYGSPPS---EQDMNAMVSALAH 240
           LKVD RR+GK PL S  SE KE ++  L      +Y  Y S  +   + D++ MVSAL+ 
Sbjct: 11  LKVDPRRYGKLPLSSQTSEAKEKEEYALVNNEFDAYNYYASNSNWCPDTDLSTMVSALSQ 70

Query: 241 VIGTGQ-NQGNPIPA-SAPALMENDPSQLVQ---DQGSERKRHYRGVRQRPWGKWAAEIR 405
           VIGT   N  NP  A S    M N+ SQ  Q   DQ +++K HYRGVRQRPWGKWAAEIR
Sbjct: 71  VIGTSSTNHNNPHMAQSTSTTMVNEDSQQPQPLIDQETKKKPHYRGVRQRPWGKWAAEIR 130

Query: 406 DPKKAARVWLGTFDTXXXXXXXXXXXXLRFKGTKAKLNFPERVQGRTDLSYYMGGQNPNM 585
           DPKKAARVWLGTFDT             +FKGTKAKLNFPERV      + Y    N  +
Sbjct: 131 DPKKAARVWLGTFDTAEDAALAYDKAAFKFKGTKAKLNFPERV---VQCNSYSSSANSAI 187

Query: 586 VMARAXXXXXXXXXISQDVYPDLFQYAQLLRGGDEDLRYATQNF 717
             + +           Q V+P+LFQYAQ+L    E   YA+  F
Sbjct: 188 QQSGSVSNSH-----DQQVFPNLFQYAQILESDAEFPYYASHLF 226


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