BLASTX nr result

ID: Cimicifuga21_contig00000086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000086
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus...   317   2e-84
ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   316   4e-84
ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   315   7e-84
ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V...   315   9e-84
ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus...   315   9e-84

>ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223530177|gb|EEF32086.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  317 bits (812), Expect = 2e-84
 Identities = 160/166 (96%), Positives = 164/166 (98%)
 Frame = +1

Query: 67  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246
           MPPKFDPSQVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHIGNISLDDVIEIAKVMKPR 426
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH GNISLDDVIEIAKVMKPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMKPR 120

Query: 427 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPKD 564
           SMAK+LSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE+P D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166


>ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147835636|emb|CAN66258.1| hypothetical protein
           VITISV_001237 [Vitis vinifera]
          Length = 166

 Score =  316 bits (809), Expect = 4e-84
 Identities = 159/166 (95%), Positives = 164/166 (98%)
 Frame = +1

Query: 67  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHIGNISLDDVIEIAKVMKPR 426
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH GNISLDDVIEIAK+M+PR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 427 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPKD 564
           SMAK+LSG+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEIP+D
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPQD 166


>ref|XP_002274407.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147785001|emb|CAN75443.1| hypothetical protein
           VITISV_019658 [Vitis vinifera]
          Length = 166

 Score =  315 bits (807), Expect = 7e-84
 Identities = 158/166 (95%), Positives = 164/166 (98%)
 Frame = +1

Query: 67  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHIGNISLDDVIEIAKVMKPR 426
           VKLTVQNRQAKVSVVPSAAALVIK+LKEPERDRKKTKNIKH GNISLDDVIEIA+VM+PR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 427 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPKD 564
           SMAK+LSGTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+P+D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEVPED 166


>ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera]
          Length = 166

 Score =  315 bits (806), Expect = 9e-84
 Identities = 159/166 (95%), Positives = 163/166 (98%)
 Frame = +1

Query: 67  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHIGNISLDDVIEIAKVMKPR 426
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH GNISLDDVIEIAK+M+PR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 427 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPKD 564
           SMAK+LSG+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEIP D
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166


>ref|XP_002519537.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223541400|gb|EEF42951.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  315 bits (806), Expect = 9e-84
 Identities = 160/166 (96%), Positives = 163/166 (98%)
 Frame = +1

Query: 67  MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 246
           MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 247 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHIGNISLDDVIEIAKVMKPR 426
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH GNISLD+VIEIAKVMKPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDNVIEIAKVMKPR 120

Query: 427 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPKD 564
           SMAK+LSGTVKEILGTCVSVGCTVD KDPKDLQQEITDGDVEIP D
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDSKDPKDLQQEITDGDVEIPLD 166


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