BLASTX nr result

ID: Cimicifuga21_contig00000084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000084
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06599.1| pathogenesis-related protein 10c [Elaeis guineensis]   105   8e-21
gb|AAB09084.1| early flowering protein 1 [Asparagus officinalis]      101   1e-19
gb|AFK42887.1| unknown [Medicago truncatula]                           99   9e-19
ref|XP_003609710.1| Pathogenesis-related protein [Medicago trunc...    98   2e-18
gb|ACF06553.1| early flowering protein 1 [Elaeis guineensis]           96   6e-18

>gb|ACF06599.1| pathogenesis-related protein 10c [Elaeis guineensis]
          Length = 159

 Score =  105 bits (263), Expect = 8e-21
 Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
 Frame = +3

Query: 12  MSIISLTEELTSTVPAAKLFKANVLDGHKLIPKLLPEIVASAS-VEGDGGVGSFKIVHFV 188
           MS  S + E+ S VPAA+LFKA VLD H L PKL+PEIV SA+ +EGDGGVGS +   F 
Sbjct: 1   MSTSSWSLEIESPVPAARLFKAAVLDWHNLAPKLVPEIVVSAAGIEGDGGVGSVRQFQF- 59

Query: 189 DGAFPFTYFKERVDVLDKENLECKITLIEGANIGKKLE 302
             A PF+Y KER+D LD + LECK +L+EG +IG K+E
Sbjct: 60  SSAMPFSYVKERLDFLDLDKLECKQSLVEGGDIGTKIE 97


>gb|AAB09084.1| early flowering protein 1 [Asparagus officinalis]
          Length = 159

 Score =  101 bits (252), Expect = 1e-19
 Identities = 52/98 (53%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = +3

Query: 12  MSIISLTEELTSTVPAAKLFKANVLDGHKLIPKLLPEIVASASVEG-DGGVGSFKIVHFV 188
           MS  +++ E+ S+V AA+LFKA++++ H L PK+LPEIV+SASV   DGGVGS + ++F 
Sbjct: 1   MSSSAVSHEIESSVSAARLFKASMIEWHNLAPKILPEIVSSASVVAVDGGVGSIRQINFT 60

Query: 189 DGAFPFTYFKERVDVLDKENLECKITLIEGANIGKKLE 302
             A PF Y KER+D +D+ N ECK +LIEG ++G KLE
Sbjct: 61  -SAMPFPYLKERLDFVDEANFECKSSLIEGGDLGTKLE 97


>gb|AFK42887.1| unknown [Medicago truncatula]
          Length = 160

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 49/98 (50%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = +3

Query: 12  MSIISLTEELTSTVPAAKLFKANVLDGHKLIPKLLPEIVASASV-EGDGGVGSFKIVHFV 188
           M + + T E +STV  +++F A ++D   LIPKLLP+ V   ++ EGDGG GS + V+F 
Sbjct: 1   MGVTTFTHEYSSTVAPSRMFTALIIDSRNLIPKLLPQFVKDVNIIEGDGGAGSIEQVNFN 60

Query: 189 DGAFPFTYFKERVDVLDKENLECKITLIEGANIGKKLE 302
           +G+ PF Y K+++DVLDKENL CK T+IEG  +G KLE
Sbjct: 61  EGS-PFKYLKQKIDVLDKENLICKYTMIEGDPLGDKLE 97


>ref|XP_003609710.1| Pathogenesis-related protein [Medicago truncatula]
           gi|355510765|gb|AES91907.1| Pathogenesis-related protein
           [Medicago truncatula]
          Length = 160

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = +3

Query: 12  MSIISLTEELTSTVPAAKLFKANVLDGHKLIPKLLPEIVASASV-EGDGGVGSFKIVHFV 188
           M + + T E +STV  +++F A ++D   LIPKLLP+ V   ++ EGDGG GS + V+F 
Sbjct: 1   MGVTTFTHEYSSTVAPSRMFTALIIDSRNLIPKLLPQFVKDVNIIEGDGGAGSIEQVNFN 60

Query: 189 DGAFPFTYFKERVDVLDKENLECKITLIEGANIGKKLE 302
           +G  PF Y K+++DVLDKENL CK T+IEG  +G KLE
Sbjct: 61  EGN-PFKYLKQKIDVLDKENLICKYTMIEGDPLGDKLE 97


>gb|ACF06553.1| early flowering protein 1 [Elaeis guineensis]
          Length = 158

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = +3

Query: 12  MSIISLTEELTSTVPAAKLFKANVLDGHKLIPKLLPEIVASA-SVEGDGGVGSFKIVHFV 188
           MS  + T E+ S  PAA+LFKA VLD H L PKLLP IVASA  V+GDG +GS + ++F 
Sbjct: 1   MSPSTWTLEIESPAPAARLFKA-VLDWHNLAPKLLPNIVASAVGVQGDGSIGSVRQINFT 59

Query: 189 DGAFPFTYFKERVDVLDKENLECKITLIEGANIGKKLE 302
             A PF Y KER+D +D +  ECK +L+EG ++GKK+E
Sbjct: 60  S-AMPFGYVKERLDFVDFDKFECKQSLVEGGDLGKKIE 96


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