BLASTX nr result

ID: Cimicifuga21_contig00000079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000079
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN409...   239   1e-60
emb|CBI36518.3| unnamed protein product [Vitis vinifera]              238   1e-60
ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ...   238   1e-60
emb|CBI38929.3| unnamed protein product [Vitis vinifera]              238   2e-60
ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is...   238   2e-60

>gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN40906.1| unknown
           [Picea sitchensis]
          Length = 141

 Score =  239 bits (609), Expect = 1e-60
 Identities = 113/137 (82%), Positives = 125/137 (91%)
 Frame = +1

Query: 139 GDEAAAPVAPTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVAD 318
           GD       PT  LGEPMDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+
Sbjct: 5   GDADVIEEKPTAALGEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAE 64

Query: 319 DCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCVVVKDY 498
           DCNQPDY KLV+ALCA+HNVNLISVPSAK LGEWAGLCKIDSEG+ARKVVGCSC+VVKDY
Sbjct: 65  DCNQPDYTKLVQALCAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCLVVKDY 124

Query: 499 GEESEGLHIVQEYVKSH 549
           GEE+EGL+++QEYVK+H
Sbjct: 125 GEETEGLNVIQEYVKTH 141


>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  238 bits (608), Expect = 1e-60
 Identities = 117/140 (83%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
 Frame = +1

Query: 133 MSGDEAAA-PVAPTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCV 309
           MSGDEA     A  P LGE +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV
Sbjct: 38  MSGDEAVVVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCV 97

Query: 310 VADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCVVV 489
           +A+DCNQPDY+KLVKALCADHNV+LISVPSAKTLGEWAGLCKIDSEG+ARKVVGCSCVVV
Sbjct: 98  LAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVV 157

Query: 490 KDYGEESEGLHIVQEYVKSH 549
           KDYGEE+ GLHIVQE+VKS+
Sbjct: 158 KDYGEETPGLHIVQEHVKSN 177


>ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 140

 Score =  238 bits (608), Expect = 1e-60
 Identities = 117/140 (83%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
 Frame = +1

Query: 133 MSGDEAAA-PVAPTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCV 309
           MSGDEA     A  P LGE +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV
Sbjct: 1   MSGDEAVVVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCV 60

Query: 310 VADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCVVV 489
           +A+DCNQPDY+KLVKALCADHNV+LISVPSAKTLGEWAGLCKIDSEG+ARKVVGCSCVVV
Sbjct: 61  LAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVV 120

Query: 490 KDYGEESEGLHIVQEYVKSH 549
           KDYGEE+ GLHIVQE+VKS+
Sbjct: 121 KDYGEETPGLHIVQEHVKSN 140


>emb|CBI38929.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  238 bits (607), Expect = 2e-60
 Identities = 115/142 (80%), Positives = 129/142 (90%), Gaps = 3/142 (2%)
 Frame = +1

Query: 133 MSGDEAAAPV---APTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQL 303
           MSG+E    V   AP P LGEPMD+MTALQLVL+KSLAH GLARGLHEGAKVIEKHAA L
Sbjct: 87  MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 146

Query: 304 CVVADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCV 483
           CV+A+DCNQPDYVKLVKALCADHNV+LI+VPSAKTLGEWAGLCKIDSEG+ARKVVGCSCV
Sbjct: 147 CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 206

Query: 484 VVKDYGEESEGLHIVQEYVKSH 549
           VVKD+GEE+E +++VQ+ VKSH
Sbjct: 207 VVKDFGEETEAMNVVQQQVKSH 228


>ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis
           vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED:
           40S ribosomal protein S12-like isoform 1 [Vitis
           vinifera]
          Length = 142

 Score =  238 bits (607), Expect = 2e-60
 Identities = 115/142 (80%), Positives = 129/142 (90%), Gaps = 3/142 (2%)
 Frame = +1

Query: 133 MSGDEAAAPV---APTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQL 303
           MSG+E    V   AP P LGEPMD+MTALQLVL+KSLAH GLARGLHEGAKVIEKHAA L
Sbjct: 1   MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 60

Query: 304 CVVADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCV 483
           CV+A+DCNQPDYVKLVKALCADHNV+LI+VPSAKTLGEWAGLCKIDSEG+ARKVVGCSCV
Sbjct: 61  CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 120

Query: 484 VVKDYGEESEGLHIVQEYVKSH 549
           VVKD+GEE+E +++VQ+ VKSH
Sbjct: 121 VVKDFGEETEAMNVVQQQVKSH 142


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