BLASTX nr result
ID: Cimicifuga21_contig00000079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00000079 (1062 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN409... 239 1e-60 emb|CBI36518.3| unnamed protein product [Vitis vinifera] 238 1e-60 ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ... 238 1e-60 emb|CBI38929.3| unnamed protein product [Vitis vinifera] 238 2e-60 ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is... 238 2e-60 >gb|ACN40559.1| unknown [Picea sitchensis] gi|224286397|gb|ACN40906.1| unknown [Picea sitchensis] Length = 141 Score = 239 bits (609), Expect = 1e-60 Identities = 113/137 (82%), Positives = 125/137 (91%) Frame = +1 Query: 139 GDEAAAPVAPTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCVVAD 318 GD PT LGEPMDI+TALQLVLKKSLAHDGLARGLHEGAK IEKHAAQLCV+A+ Sbjct: 5 GDADVIEEKPTAALGEPMDILTALQLVLKKSLAHDGLARGLHEGAKAIEKHAAQLCVLAE 64 Query: 319 DCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCVVVKDY 498 DCNQPDY KLV+ALCA+HNVNLISVPSAK LGEWAGLCKIDSEG+ARKVVGCSC+VVKDY Sbjct: 65 DCNQPDYTKLVQALCAEHNVNLISVPSAKKLGEWAGLCKIDSEGKARKVVGCSCLVVKDY 124 Query: 499 GEESEGLHIVQEYVKSH 549 GEE+EGL+++QEYVK+H Sbjct: 125 GEETEGLNVIQEYVKTH 141 >emb|CBI36518.3| unnamed protein product [Vitis vinifera] Length = 177 Score = 238 bits (608), Expect = 1e-60 Identities = 117/140 (83%), Positives = 128/140 (91%), Gaps = 1/140 (0%) Frame = +1 Query: 133 MSGDEAAA-PVAPTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCV 309 MSGDEA A P LGE +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV Sbjct: 38 MSGDEAVVVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCV 97 Query: 310 VADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCVVV 489 +A+DCNQPDY+KLVKALCADHNV+LISVPSAKTLGEWAGLCKIDSEG+ARKVVGCSCVVV Sbjct: 98 LAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVV 157 Query: 490 KDYGEESEGLHIVQEYVKSH 549 KDYGEE+ GLHIVQE+VKS+ Sbjct: 158 KDYGEETPGLHIVQEHVKSN 177 >ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera] Length = 140 Score = 238 bits (608), Expect = 1e-60 Identities = 117/140 (83%), Positives = 128/140 (91%), Gaps = 1/140 (0%) Frame = +1 Query: 133 MSGDEAAA-PVAPTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQLCV 309 MSGDEA A P LGE +D+MTALQLVL+KSLAH GL RGLHEGAKVIEKHAAQLCV Sbjct: 1 MSGDEAVVVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCV 60 Query: 310 VADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCVVV 489 +A+DCNQPDY+KLVKALCADHNV+LISVPSAKTLGEWAGLCKIDSEG+ARKVVGCSCVVV Sbjct: 61 LAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVV 120 Query: 490 KDYGEESEGLHIVQEYVKSH 549 KDYGEE+ GLHIVQE+VKS+ Sbjct: 121 KDYGEETPGLHIVQEHVKSN 140 >emb|CBI38929.3| unnamed protein product [Vitis vinifera] Length = 228 Score = 238 bits (607), Expect = 2e-60 Identities = 115/142 (80%), Positives = 129/142 (90%), Gaps = 3/142 (2%) Frame = +1 Query: 133 MSGDEAAAPV---APTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQL 303 MSG+E V AP P LGEPMD+MTALQLVL+KSLAH GLARGLHEGAKVIEKHAA L Sbjct: 87 MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 146 Query: 304 CVVADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCV 483 CV+A+DCNQPDYVKLVKALCADHNV+LI+VPSAKTLGEWAGLCKIDSEG+ARKVVGCSCV Sbjct: 147 CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 206 Query: 484 VVKDYGEESEGLHIVQEYVKSH 549 VVKD+GEE+E +++VQ+ VKSH Sbjct: 207 VVKDFGEETEAMNVVQQQVKSH 228 >ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED: 40S ribosomal protein S12-like isoform 1 [Vitis vinifera] Length = 142 Score = 238 bits (607), Expect = 2e-60 Identities = 115/142 (80%), Positives = 129/142 (90%), Gaps = 3/142 (2%) Frame = +1 Query: 133 MSGDEAAAPV---APTPVLGEPMDIMTALQLVLKKSLAHDGLARGLHEGAKVIEKHAAQL 303 MSG+E V AP P LGEPMD+MTALQLVL+KSLAH GLARGLHEGAKVIEKHAA L Sbjct: 1 MSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 60 Query: 304 CVVADDCNQPDYVKLVKALCADHNVNLISVPSAKTLGEWAGLCKIDSEGQARKVVGCSCV 483 CV+A+DCNQPDYVKLVKALCADHNV+LI+VPSAKTLGEWAGLCKIDSEG+ARKVVGCSCV Sbjct: 61 CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 120 Query: 484 VVKDYGEESEGLHIVQEYVKSH 549 VVKD+GEE+E +++VQ+ VKSH Sbjct: 121 VVKDFGEETEAMNVVQQQVKSH 142