BLASTX nr result

ID: Cimicifuga21_contig00000065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000065
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281176.1| PREDICTED: uncharacterized protein LOC100249...    86   2e-15
gb|AFK49393.1| unknown [Lotus japonicus]                               85   7e-15
ref|XP_003526495.1| PREDICTED: uncharacterized protein LOC100796...    84   1e-14
ref|XP_002309540.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
gb|ABK94391.1| unknown [Populus trichocarpa]                           82   5e-14

>ref|XP_002281176.1| PREDICTED: uncharacterized protein LOC100249040 [Vitis vinifera]
           gi|296081836|emb|CBI20841.3| unnamed protein product
           [Vitis vinifera]
          Length = 90

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 10/86 (11%)
 Frame = +3

Query: 90  MASRCRSISKPALNFLKSSINKPRIK--------PISSPQLPRSFSRLPSELACVQSLLP 245
           MASR RS+SKP L+ LKS+I K ++         P +SP LPRSFS    ++ C+QSLLP
Sbjct: 1   MASRYRSLSKPTLSLLKSTITKTKLSNPTPLLCTPGASPTLPRSFS----QIRCLQSLLP 56

Query: 246 LHSAISSARLTSCLGI--SNSRSLSQ 317
           LH+A+SSARLTSCLGI  S+SRSLSQ
Sbjct: 57  LHTAVSSARLTSCLGIDSSSSRSLSQ 82


>gb|AFK49393.1| unknown [Lotus japonicus]
          Length = 93

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 7/83 (8%)
 Frame = +3

Query: 90  MASRCRSISKPALNFLKSSINKPRIKPISSPQLPR-----SFSRLPSELACVQSLLPLHS 254
           MASR RS S+PA++ +KS+I KP   P  SP L +     S +R  +EL CVQSLLPLHS
Sbjct: 1   MASRYRSFSQPAMSLIKSTITKPTTNPKPSPFLFKTRSSSSSTRSVAELGCVQSLLPLHS 60

Query: 255 AISSARLTSCLGISN--SRSLSQ 317
           A+SSARLTSCLGI +  SRSLSQ
Sbjct: 61  AVSSARLTSCLGIDSRTSRSLSQ 83


>ref|XP_003526495.1| PREDICTED: uncharacterized protein LOC100796764 [Glycine max]
          Length = 93

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 49/85 (57%), Positives = 60/85 (70%), Gaps = 9/85 (10%)
 Frame = +3

Query: 90  MASRCRSISKPALNFLKSSINKPRIKPISSPQLPRSFS-------RLPSELACVQSLLPL 248
           MASR RS+S+PA + +KS+I KP  KP+ S  L ++ S       R   +L C+QSLLPL
Sbjct: 1   MASRYRSVSQPAFSLIKSTITKPASKPVPSSFLLKTRSPVTARQVRFGGKLGCLQSLLPL 60

Query: 249 HSAISSARLTSCLGI--SNSRSLSQ 317
           HSA+SSARLTSCLGI  S SRSLSQ
Sbjct: 61  HSAVSSARLTSCLGIDSSRSRSLSQ 85


>ref|XP_002309540.1| predicted protein [Populus trichocarpa] gi|222855516|gb|EEE93063.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
 Frame = +3

Query: 90  MASRCRSISKPALNFLKSSINKPRIKPISSPQL-----PRSFSRLPSELACVQSLLPLHS 254
           MASR RS+SKP  + LKS+ NKP ++P S+P L       +FSR   +L  +QSLLP HS
Sbjct: 1   MASRYRSLSKPTFSLLKSTTNKPTLQPKSTPSLLPARPSLTFSRPVPQLGAIQSLLPFHS 60

Query: 255 AISSARLTSCLGIS--NSRSLSQ 317
           A+SSARLTSCL I   +SRSLSQ
Sbjct: 61  AVSSARLTSCLSIDSRSSRSLSQ 83


>gb|ABK94391.1| unknown [Populus trichocarpa]
          Length = 91

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
 Frame = +3

Query: 90  MASRCRSISKPALNFLKSSINKPRIKPISSPQL-----PRSFSRLPSELACVQSLLPLHS 254
           MASR RS+SKP  + LKS+ NKP ++P S+P L       +FSR   +L  +QSLLP HS
Sbjct: 1   MASRYRSLSKPTFSLLKSTTNKPTLQPKSTPSLLPARPSLTFSRPVPQLGAIQSLLPFHS 60

Query: 255 AISSARLTSCLGIS--NSRSLSQ 317
           A+SSARLTSCL I   +SRSLSQ
Sbjct: 61  AVSSARLTSCLSIDSRSSRSLSQ 83


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