BLASTX nr result

ID: Cimicifuga21_contig00000061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000061
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]              189   3e-46
ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumi...   188   3e-46
gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   188   4e-46
gb|ABB77426.1| Skp1-like protein 1 [Petunia integrifolia subsp. ...   187   6e-46
ref|XP_002279232.1| PREDICTED: SKP1-like protein 1A [Vitis vinif...   187   8e-46

>gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]
          Length = 153

 Score =  189 bits (479), Expect = 3e-46
 Identities = 92/134 (68%), Positives = 109/134 (81%)
 Frame = +1

Query: 1   VLSESQTIKNMIEDGCTQEAIPLPNVNGKILAKVIEFCRKHVENPNKTEDREVDEDLKKW 180
           V  ESQTIK+MIED C   +IPLPNV  KILAKVIE+C++HV+  +KTED+ V++DLK +
Sbjct: 20  VALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVDAASKTEDKAVEDDLKAF 79

Query: 181 DAEFVKVDQDTLFDLILAANYLNIKSLLDLTCSTVADMMKGKSPEDIRKTFHIVNDYTKX 360
           DA+FVKVDQ TLFDLILAANYLNIKSLLDLTC TVADM+KGK+PE+IRKTF+I ND+T  
Sbjct: 80  DADFVKVDQSTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPE 139

Query: 361 XXXXXXXXNAWAFE 402
                   NAWAFE
Sbjct: 140 EEEEVRRENAWAFE 153


>ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
           gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like
           protein 1B-like [Cucumis sativus]
          Length = 157

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/136 (70%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1   VLSESQTIKNMIEDGCTQEAIPLPNVNGKILAKVIEFCRKHVENPNKTEDR--EVDEDLK 174
           V  ESQTIK+MIED C    IPLPNVN KIL+KVIE+C+KHVE+P K EDR   VD+DLK
Sbjct: 23  VALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESP-KPEDRTGSVDDDLK 81

Query: 175 KWDAEFVKVDQDTLFDLILAANYLNIKSLLDLTCSTVADMMKGKSPEDIRKTFHIVNDYT 354
            WD+EFVKVDQ TLFDLILAANYLNIKSLLDLTC TVADM+KGK+PE+IRKTF+I ND+T
Sbjct: 82  TWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 141

Query: 355 KXXXXXXXXXNAWAFE 402
                     N WAFE
Sbjct: 142 PEEEEEVRRENQWAFE 157


>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  188 bits (477), Expect = 4e-46
 Identities = 93/134 (69%), Positives = 105/134 (78%)
 Frame = +1

Query: 1   VLSESQTIKNMIEDGCTQEAIPLPNVNGKILAKVIEFCRKHVENPNKTEDREVDEDLKKW 180
           V  ESQTIK+MIED C    IPLPNV  KILAKVIE+C+KHVE P KT+DR  D++LK W
Sbjct: 24  VALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKKHVEAP-KTDDRSADDELKSW 82

Query: 181 DAEFVKVDQDTLFDLILAANYLNIKSLLDLTCSTVADMMKGKSPEDIRKTFHIVNDYTKX 360
           DA+FVKVDQ TLFDLILAANYLNIK LLDLTC TVADM+KGK+PE+IRKTF+I ND+T  
Sbjct: 83  DADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPE 142

Query: 361 XXXXXXXXNAWAFE 402
                   N WAFE
Sbjct: 143 EEEEVRRENQWAFE 156


>gb|ABB77426.1| Skp1-like protein 1 [Petunia integrifolia subsp. inflata]
           gi|169647579|gb|ACA61786.1| SKP1-like protein 4 [Petunia
           x hybrida]
          Length = 156

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/134 (69%), Positives = 107/134 (79%)
 Frame = +1

Query: 1   VLSESQTIKNMIEDGCTQEAIPLPNVNGKILAKVIEFCRKHVENPNKTEDREVDEDLKKW 180
           V  ESQTIK+MIED C   +IPLPNV  KILAKVIE+C++HVE   KT+D+  +EDLK +
Sbjct: 23  VALESQTIKHMIEDDCADSSIPLPNVTSKILAKVIEYCKRHVEAAAKTDDKVSEEDLKNF 82

Query: 181 DAEFVKVDQDTLFDLILAANYLNIKSLLDLTCSTVADMMKGKSPEDIRKTFHIVNDYTKX 360
           DAEFVKVDQ TLFDLILAANYLNIKSLLDLTC TVADM+KGK+PE+IRKTF+I ND+T  
Sbjct: 83  DAEFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPE 142

Query: 361 XXXXXXXXNAWAFE 402
                   NAWAFE
Sbjct: 143 EEEEVRRENAWAFE 156


>ref|XP_002279232.1| PREDICTED: SKP1-like protein 1A [Vitis vinifera]
           gi|147820987|emb|CAN73136.1| hypothetical protein
           VITISV_023042 [Vitis vinifera]
          Length = 155

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/134 (69%), Positives = 107/134 (79%)
 Frame = +1

Query: 1   VLSESQTIKNMIEDGCTQEAIPLPNVNGKILAKVIEFCRKHVENPNKTEDREVDEDLKKW 180
           V  ESQTIK+MIEDGC   AIPLPNV  KILAKVIE+C+KHVE P K E+  V+++LK W
Sbjct: 23  VAVESQTIKHMIEDGCADNAIPLPNVTSKILAKVIEYCKKHVETP-KAEEHAVNDELKAW 81

Query: 181 DAEFVKVDQDTLFDLILAANYLNIKSLLDLTCSTVADMMKGKSPEDIRKTFHIVNDYTKX 360
           DA+FVKVDQ TLFDLILAANYL+IKSLLDLTC TVADM+KGK+PE+IRKTF+I ND+T  
Sbjct: 82  DADFVKVDQATLFDLILAANYLDIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPE 141

Query: 361 XXXXXXXXNAWAFE 402
                   N WAFE
Sbjct: 142 EEEDVRRENQWAFE 155


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