BLASTX nr result

ID: Cimicifuga21_contig00000048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000048
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234630.1| autophagy 8a [Solanum lycopersicum] gi|32402...   200   3e-49
ref|XP_002279682.1| PREDICTED: autophagy-related protein 8C isof...   200   3e-49
ref|XP_002279664.1| PREDICTED: autophagy-related protein 8C isof...   200   3e-49
dbj|BAJ13300.1| autophagy 8 [Ipomoea nil]                             199   7e-49
ref|XP_002529905.1| gaba(A) receptor-associated protein, putativ...   199   9e-49

>ref|NP_001234630.1| autophagy 8a [Solanum lycopersicum] gi|324029060|gb|ADY16677.1|
           autophagy 8a [Solanum lycopersicum]
          Length = 119

 Score =  200 bits (509), Expect = 3e-49
 Identities = 101/118 (85%), Positives = 105/118 (88%)
 Frame = +3

Query: 255 SKSSFKLEHPLXXXXXXXXXXXXKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQF 434
           +KSSFKLEHPL            KYPDRIPVIVEKAER+DIPDIDKKKYLVPADLTVGQF
Sbjct: 2   AKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQF 61

Query: 435 VYVVRKRIKLSAEKAIFIFVKSILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGGF 608
           VYVVRKRIKLSAEKAIFIFVK+ILPPTAAMMSAIYEE+KDEDGFLYMTYSGENTFG F
Sbjct: 62  VYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF 119


>ref|XP_002279682.1| PREDICTED: autophagy-related protein 8C isoform 2 [Vitis vinifera]
          Length = 125

 Score =  200 bits (509), Expect = 3e-49
 Identities = 99/118 (83%), Positives = 105/118 (88%)
 Frame = +3

Query: 255 SKSSFKLEHPLXXXXXXXXXXXXKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQF 434
           ++SSFKLEHPL            KYPDRIPVIVEKAER+DIPDIDKKKYLVPADLTVGQF
Sbjct: 8   ARSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQF 67

Query: 435 VYVVRKRIKLSAEKAIFIFVKSILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGGF 608
           VYV+RKRIKLSAEKAIFIFVK++LPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG F
Sbjct: 68  VYVIRKRIKLSAEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGSF 125


>ref|XP_002279664.1| PREDICTED: autophagy-related protein 8C isoform 1 [Vitis vinifera]
           gi|297737448|emb|CBI26649.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  200 bits (509), Expect = 3e-49
 Identities = 99/118 (83%), Positives = 105/118 (88%)
 Frame = +3

Query: 255 SKSSFKLEHPLXXXXXXXXXXXXKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQF 434
           ++SSFKLEHPL            KYPDRIPVIVEKAER+DIPDIDKKKYLVPADLTVGQF
Sbjct: 2   ARSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQF 61

Query: 435 VYVVRKRIKLSAEKAIFIFVKSILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGGF 608
           VYV+RKRIKLSAEKAIFIFVK++LPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG F
Sbjct: 62  VYVIRKRIKLSAEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGSF 119


>dbj|BAJ13300.1| autophagy 8 [Ipomoea nil]
          Length = 119

 Score =  199 bits (506), Expect = 7e-49
 Identities = 100/118 (84%), Positives = 105/118 (88%)
 Frame = +3

Query: 255 SKSSFKLEHPLXXXXXXXXXXXXKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQF 434
           +KSSFKLEHPL            KYPDRIPVIVEKAER+DIPDIDKKKYLVPADLTVGQF
Sbjct: 2   AKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQF 61

Query: 435 VYVVRKRIKLSAEKAIFIFVKSILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGGF 608
           VYVVRKRIKLSAEKAIFIFVK+ILPPTAAMMSAIY+E+KDEDGFLYMTYSGENTFG F
Sbjct: 62  VYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYDEHKDEDGFLYMTYSGENTFGSF 119


>ref|XP_002529905.1| gaba(A) receptor-associated protein, putative [Ricinus communis]
           gi|223530582|gb|EEF32459.1| gaba(A) receptor-associated
           protein, putative [Ricinus communis]
          Length = 125

 Score =  199 bits (505), Expect = 9e-49
 Identities = 100/116 (86%), Positives = 104/116 (89%)
 Frame = +3

Query: 255 SKSSFKLEHPLXXXXXXXXXXXXKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQF 434
           +KSSFKLEHPL            KYPDRIPVIVE+AER+DIPDIDKKKYLVPADLTVGQF
Sbjct: 2   AKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKKYLVPADLTVGQF 61

Query: 435 VYVVRKRIKLSAEKAIFIFVKSILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 602
           VYVVRKRIKLSAEKAIFIFVK+ILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG
Sbjct: 62  VYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117


Top