BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000044
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|1...   406   e-111
ref|XP_002516208.1| Eukaryotic translation initiation factor 3 s...   397   e-108
gb|ABK93965.1| unknown [Populus trichocarpa]                          397   e-108
ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation...   392   e-107
ref|XP_002324723.1| predicted protein [Populus trichocarpa] gi|2...   391   e-106

>ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|118488161|gb|ABK95900.1|
           unknown [Populus trichocarpa]
           gi|222833340|gb|EEE71817.1| predicted protein [Populus
           trichocarpa]
          Length = 235

 Score =  406 bits (1044), Expect = e-111
 Identities = 205/234 (87%), Positives = 214/234 (91%), Gaps = 4/234 (1%)
 Frame = -3

Query: 887 MGREREV----QKQPISYTVEQLIALNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 720
           MGREREV    +K+ ISYTVEQL+A+NPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR
Sbjct: 1   MGREREVPNKSEKEVISYTVEQLVAVNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLR 60

Query: 719 LYQFEPERMNIQIVARILVKALMAMPAPDFTLCLFLIPERVQMEEPFKTLFVLSQYLETG 540
           LYQFEPERM+ QIVARILVKALMAMPAPDF+LCLFLIPERVQMEE FKTL VLS YLETG
Sbjct: 61  LYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETG 120

Query: 539 RFRQFWDEAAKNRSIVEVVPGFEQAIQAYAIHVLSLTYQKVPRSVLAEAINIEGLSLDKF 360
           RFRQFWDEAAK+R IVE VPGFEQAIQAYAIH+LSLTYQKVPRSVLAEAINIEGLSLDKF
Sbjct: 121 RFRQFWDEAAKSRHIVEAVPGFEQAIQAYAIHLLSLTYQKVPRSVLAEAINIEGLSLDKF 180

Query: 359 LEHQVITCGWVLEKGHSRGQLISLPRNEFNQPELKKNTADSIPLEHVTRIFPIL 198
           LE QV  CGW+LEK H RGQLI LP NEFN PELKKNTADSIPLEHV RIFPIL
Sbjct: 181 LEQQVANCGWILEKSHGRGQLIVLPSNEFNHPELKKNTADSIPLEHVARIFPIL 234


>ref|XP_002516208.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223544694|gb|EEF46210.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 236

 Score =  397 bits (1020), Expect = e-108
 Identities = 195/235 (82%), Positives = 212/235 (90%), Gaps = 5/235 (2%)
 Frame = -3

Query: 887 MGREREVQK-----QPISYTVEQLIALNPYNPDILPDLENYVNEQVSSQTYSLDANLCLL 723
           MGRERE QK     Q +SYTVEQL+A+NPYNPD+LPDLENYVN+QVSSQTYSLDANLCLL
Sbjct: 1   MGRERETQKSQQQQQQVSYTVEQLVAVNPYNPDVLPDLENYVNKQVSSQTYSLDANLCLL 60

Query: 722 RLYQFEPERMNIQIVARILVKALMAMPAPDFTLCLFLIPERVQMEEPFKTLFVLSQYLET 543
           RLYQFEPERM+ QIVARILVKALMA+PAPDF+LCLFLIPERVQMEE  K L VLS +LET
Sbjct: 61  RLYQFEPERMSTQIVARILVKALMALPAPDFSLCLFLIPERVQMEEQLKNLIVLSHFLET 120

Query: 542 GRFRQFWDEAAKNRSIVEVVPGFEQAIQAYAIHVLSLTYQKVPRSVLAEAINIEGLSLDK 363
           GRFRQFWDEAAK+R IVE VPGFEQA+QAYAIH+LSLTYQKVPRSVLAEAIN+E LSLDK
Sbjct: 121 GRFRQFWDEAAKSRHIVEAVPGFEQAVQAYAIHLLSLTYQKVPRSVLAEAINVEALSLDK 180

Query: 362 FLEHQVITCGWVLEKGHSRGQLISLPRNEFNQPELKKNTADSIPLEHVTRIFPIL 198
           FLEHQV  CGW++EKGH +GQLI LP NEFN PELKKNTAD+IPLEHV RIFPIL
Sbjct: 181 FLEHQVANCGWIIEKGHGKGQLIVLPSNEFNHPELKKNTADTIPLEHVARIFPIL 235


>gb|ABK93965.1| unknown [Populus trichocarpa]
          Length = 238

 Score =  397 bits (1020), Expect = e-108
 Identities = 200/237 (84%), Positives = 210/237 (88%), Gaps = 7/237 (2%)
 Frame = -3

Query: 887 MGREREVQKQP-------ISYTVEQLIALNPYNPDILPDLENYVNEQVSSQTYSLDANLC 729
           MGRERE  ++P       +SYTVEQL+A+NPYNPDILPDLENYVNEQVSS TYSLDANLC
Sbjct: 1   MGREREAPQKPQQQQEEVVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSLTYSLDANLC 60

Query: 728 LLRLYQFEPERMNIQIVARILVKALMAMPAPDFTLCLFLIPERVQMEEPFKTLFVLSQYL 549
           LLRLYQFEPERM+ QIVARIL+KALMAMPAPDF LCLFLIPERVQMEE FKTL VLS YL
Sbjct: 61  LLRLYQFEPERMSTQIVARILIKALMAMPAPDFGLCLFLIPERVQMEEQFKTLIVLSHYL 120

Query: 548 ETGRFRQFWDEAAKNRSIVEVVPGFEQAIQAYAIHVLSLTYQKVPRSVLAEAINIEGLSL 369
           ETGRFRQFWDEAAKNR IVE VPGFEQAIQ YAIH+LSLTYQKVPRS+LAEAINIEGLSL
Sbjct: 121 ETGRFRQFWDEAAKNRHIVEAVPGFEQAIQTYAIHLLSLTYQKVPRSILAEAINIEGLSL 180

Query: 368 DKFLEHQVITCGWVLEKGHSRGQLISLPRNEFNQPELKKNTADSIPLEHVTRIFPIL 198
           DKFLE QV  CGW LEKGH + QLI LP NEFN PELKKNTADSIPLEHVTRIFPIL
Sbjct: 181 DKFLEQQVSNCGWTLEKGHGQVQLIVLPSNEFNHPELKKNTADSIPLEHVTRIFPIL 237


>ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation factor 3 subunit K
           [Vitis vinifera] gi|297738508|emb|CBI27753.3| unnamed
           protein product [Vitis vinifera]
          Length = 229

 Score =  392 bits (1007), Expect = e-107
 Identities = 196/223 (87%), Positives = 204/223 (91%)
 Frame = -3

Query: 866 QKQPISYTVEQLIALNPYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEPERMNI 687
           Q+    YTVEQL+ALNPYNPDILPDLEN+VNEQVSSQTYSLDANLCLLRLYQFEPERM+ 
Sbjct: 6   QQPQQQYTVEQLLALNPYNPDILPDLENFVNEQVSSQTYSLDANLCLLRLYQFEPERMST 65

Query: 686 QIVARILVKALMAMPAPDFTLCLFLIPERVQMEEPFKTLFVLSQYLETGRFRQFWDEAAK 507
           QIVARILVKALMAMPAPDF+LCLFLIPERVQMEE FKTL VLS YLET RFRQFWDEAAK
Sbjct: 66  QIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFWDEAAK 125

Query: 506 NRSIVEVVPGFEQAIQAYAIHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVITCGWV 327
           NR IVEVVPGFEQAIQAYAIHVLSLTYQKVPR+VLAEAINIEGLSLDKFLEHQV  CGWV
Sbjct: 126 NRHIVEVVPGFEQAIQAYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVANCGWV 185

Query: 326 LEKGHSRGQLISLPRNEFNQPELKKNTADSIPLEHVTRIFPIL 198
           LEK   +GQLI LP NEFN PELKKN ADSIPLEH+TRIFPIL
Sbjct: 186 LEKSQGKGQLIVLPPNEFNHPELKKNAADSIPLEHITRIFPIL 228


>ref|XP_002324723.1| predicted protein [Populus trichocarpa] gi|222866157|gb|EEF03288.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  391 bits (1004), Expect = e-106
 Identities = 200/242 (82%), Positives = 210/242 (86%), Gaps = 12/242 (4%)
 Frame = -3

Query: 887 MGREREVQKQP-------ISYTVEQLIALNPYNPDILPDLENYVNEQVSSQTYSLDANLC 729
           MGRERE  ++P       +SYTVEQL+A+NPYNPDILPDLENYVNEQVSS TYSLDANLC
Sbjct: 1   MGREREAPQKPQQQQEEVVSYTVEQLVAVNPYNPDILPDLENYVNEQVSSLTYSLDANLC 60

Query: 728 LLRLYQFEPERMNIQIVARILVKALMAMPAPDFTLCLFLIPERVQMEEPFKTLFVLSQYL 549
           LLRLYQFEPERM+ QIVARIL+KALMAMPAPDF LCLFLIPERVQMEE FKTL VLS YL
Sbjct: 61  LLRLYQFEPERMSTQIVARILIKALMAMPAPDFGLCLFLIPERVQMEEQFKTLIVLSHYL 120

Query: 548 ETGRFRQFWDEAAKNRSIVEVVPGFEQAIQAYAIHVLSLTYQKVPRSVLAE-----AINI 384
           ETGRFRQFWDEAAKNR IVE VPGFEQAIQ YAIH+LSLTYQKVPRS+LAE     AINI
Sbjct: 121 ETGRFRQFWDEAAKNRHIVEAVPGFEQAIQTYAIHLLSLTYQKVPRSILAEACMWQAINI 180

Query: 383 EGLSLDKFLEHQVITCGWVLEKGHSRGQLISLPRNEFNQPELKKNTADSIPLEHVTRIFP 204
           EGLSLDKFLE QV  CGW LEKGH + QLI LP NEFN PELKKNTADSIPLEHVTRIFP
Sbjct: 181 EGLSLDKFLEQQVSNCGWTLEKGHGQVQLIVLPSNEFNHPELKKNTADSIPLEHVTRIFP 240

Query: 203 IL 198
           IL
Sbjct: 241 IL 242