BLASTX nr result
ID: Cimicifuga21_contig00000030
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00000030 (1275 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002868913.1| kelch repeat-containing F-box family protein... 60 2e-06 >ref|XP_002868913.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297314749|gb|EFH45172.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 389 Score = 59.7 bits (143), Expect = 2e-06 Identities = 68/216 (31%), Positives = 87/216 (40%), Gaps = 1/216 (0%) Frame = -1 Query: 993 IYMIGGDHSGKLEGSTDVFCFDTQSQPPFQWRKEKFHLLAKRCQPAVVAAHGKIFVFGSN 814 IY IGG E S+ V D QS W E + +R PA GKI+V G Sbjct: 147 IYNIGGPTDK--EHSSIVSILDCQSHT---WG-EAPSMRVERRYPAANVLDGKIYVTGGC 200 Query: 813 ICRSKPKPWAEVFDPKLNLCTPLPEPPREVIEAYGSIDTAVVANGDTILLCMEDSLFSFD 634 S P W EVFDPK P+ P E+ S+ + V G+ IL L + Sbjct: 201 KDCSNPSNWMEVFDPKTQTWEPVSSPGAEI--GGCSMHKSAVVEGE-ILFANSHGLI-YQ 256 Query: 633 VRNKLWGRVLTPLFSPSRWSYRSAPVDDILFMYCQGRVLAYDLGAEKWFQ-KPVKGLGIA 457 + W R+ + W Y V+D+L+ Y +G YD A W K VKGL Sbjct: 257 PKEGRWKRMEWDMDIGWVW-YSYCVVEDVLYYYYKGDFKWYDTKARLWRNLKGVKGL--- 312 Query: 456 SRGVIPRSELRHGHVVHIGNKTLCVVWYDEVKSHTC 349 PR G +V G K + V W V S C Sbjct: 313 -----PRFARCGGKMVDYGGK-MAVFWDKIVTSDGC 342