BLASTX nr result

ID: Cimicifuga21_contig00000027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000027
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC01198.1| eukaryotic translation initiation factor [Ammopip...   306   6e-81
gb|AFR23349.1| eukaryotic translation initiation factor 5A [Arac...   305   1e-80
ref|NP_001237458.1| eukaryotic translation initiation factor 5A3...   305   2e-80
gb|AEO33597.1| hypothetical protein [Amblyomma maculatum]             304   2e-80
gb|AFK38403.1| unknown [Lotus japonicus]                              303   4e-80

>gb|AFC01198.1| eukaryotic translation initiation factor [Ammopiptanthus
           mongolicus]
          Length = 160

 Score =  306 bits (784), Expect = 6e-81
 Identities = 146/157 (92%), Positives = 154/157 (98%)
 Frame = +2

Query: 272 MSDEEHHFEAKGDAGASKTFPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 451
           MSDEEHHFE+K DAGASKT+PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 452 VAIDIFTAKKLEDIVPSSHNCDIPHVTRTDYQLIDISEDGFLSLLTENGNTKDDLKLPTD 631
           V IDIFTAKKLEDIVPSSHNCD+PHV RTDYQLIDISEDGFLSLLTENGNTKDDLKLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFLSLLTENGNTKDDLKLPTD 120

Query: 632 DSLLTQIKDGFAEGKDLVVSVMSSMGEEQVCAIKDIG 742
           D+LLTQIKDGFAEGKDLVVSVMS+MGEEQ+CA+KDIG
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIG 157


>gb|AFR23349.1| eukaryotic translation initiation factor 5A [Arachis hypogaea]
          Length = 160

 Score =  305 bits (781), Expect = 1e-80
 Identities = 145/157 (92%), Positives = 154/157 (98%)
 Frame = +2

Query: 272 MSDEEHHFEAKGDAGASKTFPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 451
           MSDEEHHFE+K DAGASKT+PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 452 VAIDIFTAKKLEDIVPSSHNCDIPHVTRTDYQLIDISEDGFLSLLTENGNTKDDLKLPTD 631
           V IDIFTAKKLEDIVPSSHNCD+PHV RTDYQLIDISEDGF+SLLTENGNTKDDL+LPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 632 DSLLTQIKDGFAEGKDLVVSVMSSMGEEQVCAIKDIG 742
           DSLLTQIKDGFAEGKDLVVSVMS+MGEEQ+CA+KDIG
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIG 157


>ref|NP_001237458.1| eukaryotic translation initiation factor 5A3 [Glycine max]
           gi|356516830|ref|XP_003527096.1| PREDICTED: eukaryotic
           translation initiation factor 5A-2-like [Glycine max]
           gi|356562868|ref|XP_003549690.1| PREDICTED: eukaryotic
           translation initiation factor 5A-2-like isoform 1
           [Glycine max] gi|356562870|ref|XP_003549691.1|
           PREDICTED: eukaryotic translation initiation factor
           5A-2-like isoform 2 [Glycine max]
           gi|217038832|gb|ACJ76773.1| eukaryotic translation
           initiation factor 5A2 [Glycine max]
           gi|217038834|gb|ACJ76774.1| eukaryotic translation
           initiation factor 5A3 [Glycine max]
          Length = 160

 Score =  305 bits (780), Expect = 2e-80
 Identities = 145/157 (92%), Positives = 154/157 (98%)
 Frame = +2

Query: 272 MSDEEHHFEAKGDAGASKTFPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 451
           MSDEEHHFE+K DAGASKT+PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 452 VAIDIFTAKKLEDIVPSSHNCDIPHVTRTDYQLIDISEDGFLSLLTENGNTKDDLKLPTD 631
           V IDIFTAKKLEDIVPSSHNCD+PHV RTDYQLIDI+EDGFLSLLTENGNTKDDLKLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120

Query: 632 DSLLTQIKDGFAEGKDLVVSVMSSMGEEQVCAIKDIG 742
           +SLLTQIKDGFAEGKDLVVSVMS+MGEEQ+CA+KDIG
Sbjct: 121 ESLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIG 157


>gb|AEO33597.1| hypothetical protein [Amblyomma maculatum]
          Length = 183

 Score =  304 bits (779), Expect = 2e-80
 Identities = 146/167 (87%), Positives = 158/167 (94%)
 Frame = +2

Query: 242 AAKTTE*GGNMSDEEHHFEAKGDAGASKTFPQQAGTIRKSGYIVIKGRPCKVVEVSTSKT 421
           AA+ +  GG MSDEEHHFE+K DAGASKT+PQQAGTIRK+GYIVIK RPCKVVEVSTSKT
Sbjct: 16  AAEESTEGGIMSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKT 75

Query: 422 GKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDIPHVTRTDYQLIDISEDGFLSLLTENGN 601
           GKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCD+PHV RTDYQLIDISEDGF+SLLTENG 
Sbjct: 76  GKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGG 135

Query: 602 TKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSSMGEEQVCAIKDIG 742
           TKDDL+LPTDD+LLTQIKDGFAEGKDLVVSVMS+MGEEQ+C +KDIG
Sbjct: 136 TKDDLRLPTDDALLTQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIG 182


>gb|AFK38403.1| unknown [Lotus japonicus]
          Length = 159

 Score =  303 bits (777), Expect = 4e-80
 Identities = 144/157 (91%), Positives = 155/157 (98%)
 Frame = +2

Query: 272 MSDEEHHFEAKGDAGASKTFPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 451
           MSDEEHHFE+K DAGASKT+PQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 452 VAIDIFTAKKLEDIVPSSHNCDIPHVTRTDYQLIDISEDGFLSLLTENGNTKDDLKLPTD 631
           VAIDIFTAKKLEDIVPSSHNCD+PHV RTDYQLIDI+EDGFLSLLTENGNTKDDLKLPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120

Query: 632 DSLLTQIKDGFAEGKDLVVSVMSSMGEEQVCAIKDIG 742
           ++LL+QIKDGFAEGKDLV+SVMS+MGEEQ+CA+KDIG
Sbjct: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIG 157


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