BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000016
         (1748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   409   e-112
ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   358   3e-96
ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   357   4e-96
ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   354   5e-95
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   351   3e-94

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
            gi|297745602|emb|CBI40767.3| unnamed protein product
            [Vitis vinifera]
          Length = 492

 Score =  409 bits (1052), Expect = e-112
 Identities = 236/484 (48%), Positives = 289/484 (59%), Gaps = 14/484 (2%)
 Frame = +1

Query: 88   ARMEIRLPITEQVNSLPNNQPTSLEIIPKAKKE-PEALIDARSLESSP--SVTDVITIPS 258
            A+  I+ PI     +L     +S  IIP  K E P A   + S+   P  S  + I IPS
Sbjct: 3    AQSPIKDPIGASTETLTQQPDSSSSIIPTVKSEIPVAASASPSVGIVPRASEPETINIPS 62

Query: 259  CSRWFSWDKVHESERRNLPEFFDKRSPSKNSRTYMYYRNSIINFFRENPSRKITFTQVRK 438
             SRWFSW+ VHE E R LPEFFD RSPSKN R Y YYRNSII  FR+NPSRK+TFT VRK
Sbjct: 63   YSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKLTFTDVRK 122

Query: 439  VLVGDVGSIRRVFDFLEGWGLINYTGMTPKPQSKSDDKENRYDISLS----------KNE 588
            +LVGDVGSIRRVFDFLE WGLINY+G   K   K ++K+N+   + S          ++ 
Sbjct: 123  ILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKSGGASSHTGDAGGGAVESI 182

Query: 589  TSTRFCSGCNKXXXXXXXXXXXXKLNMTLCARCYVGGEYRVNGVASTDDFRRVEISEQTK 768
               R+CSGC              K ++TLCARCYV G YRV    ++ DFRRVEISE TK
Sbjct: 183  PKRRWCSGCKS--LCSIACFACDKFDLTLCARCYVRGNYRVG--VNSSDFRRVEISEDTK 238

Query: 769  TEWTDKETLNLLEATMHYGDDWKKVAEHVGGRSEKECVARFIKLPFKERFIGPPGAEEVD 948
              WTDKETL+LLEA +HYGDDWKKVAEHVGGR+EKECV  FIKL F E+++G   + +VD
Sbjct: 239  AGWTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSFGEQYLGHTSSGDVD 298

Query: 949  -KYGPTSTPSAAETGEESSFPSSPAKKRRLTPFGDTSNPIMAQVAFLSAMXXXXXXXXXX 1125
             K+      S A  G+E+   SS +KK RLTP  D SNPIMAQ AFLSA+          
Sbjct: 299  NKFSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAFLSALVGVEVAEAAA 358

Query: 1126 XXXXXXXXXXNLTTDRRCLERIYTSPPDGKYQNESASDANDGDTMNTXXXXXXXXXXXXX 1305
                          D R ++    S  +G    +   ++N   T N              
Sbjct: 359  RAAVASLS----DVDPRKMKEGLGSFANGARIQDPNVESNGNTTSNVLEGAYVDAKSLLE 414

Query: 1306 XXXXDMEKSITGIVEVQMKEVEDKIVHFEEVELQMEREWKQLHYMKSLLFADQLTLSFQR 1485
                D+E++I+GI EVQMKE+ DKIVHFEE EL ME+EW+QL  MK+LLF DQLTL FQ+
Sbjct: 415  REELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLLFVDQLTLLFQK 474

Query: 1486 STTP 1497
            +  P
Sbjct: 475  AAAP 478


>ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 555

 Score =  358 bits (918), Expect = 3e-96
 Identities = 219/511 (42%), Positives = 282/511 (55%), Gaps = 21/511 (4%)
 Frame = +1

Query: 52   AKLVQNVTSPGQARMEIRLPITEQVNSLPNNQPTSLEIIPKAKKEPEALIDARSLESSPS 231
            A   Q+  SP  A +   L    ++ + P++   +   +P     PE L  + S      
Sbjct: 76   ASAKQSAPSPSPALVTPPL----KIETPPSDSGQTPSAVPAPTPRPEDLPQSTS------ 125

Query: 232  VTDVITIPSCSRWFSWDKVHESERRNLPEFFDKRSPSKNSRTYMYYRNSIINFFRENPSR 411
              D I +PS SRWFSW+ +HE E R LPEFFD RSPSKN R Y Y RNSI+  FRE PS+
Sbjct: 126  -PDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSK 184

Query: 412  KITFTQVRKVLVGDVGSIRRVFDFLEGWGLINYTGMTPKPQSKSDDKENRYDISLSK--- 582
            KITFT +RK LV DVGSIRRVFDFLE WGLINY+        K DD++++ + S S    
Sbjct: 185  KITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNTGE 244

Query: 583  -----------NETSTRFCSGCNKXXXXXXXXXXXXKLNMTLCARCYVGGEYRVNGVAST 729
                        + S R CSGC              K ++TLCARCYV G YRV    S+
Sbjct: 245  PGGGSANSSAPKDASKRVCSGCKS--ICSIACFACDKFDLTLCARCYVRGNYRVG--VSS 300

Query: 730  DDFRRVEISEQTKTEWTDKETLNLLEATMHYGDDWKKVAEHVGGRSEKECVARFIKLPFK 909
             DFRRVEI++ T+T+WTDKETL+LLEA  HYGDDWKKVA+HVGGR+E+ECVA+F+KLP  
Sbjct: 301  SDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLG 360

Query: 910  ERFIGPPGAEEVDKYGPTSTPSAAETGEESS---FPSSPAKKRRLTPFGDTSNPIMAQVA 1080
            E+F G P +E +D        ++A    ES+     S P K+ RL+P  D SNPIMAQ A
Sbjct: 361  EQFHGYPDSEHIDNNCTVKDEASANLMLESTGKIGTSIPNKRIRLSPLADASNPIMAQAA 420

Query: 1081 FLSAMXXXXXXXXXXXXXXXXXXXXNLTTDRRCLERIYTSPPDGKYQNESASDAND---- 1248
            FLS++                    +   D      I  +   G+  N++AS        
Sbjct: 421  FLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGEI--AIPVARNIGEQGNDAASHGGSCLSR 478

Query: 1249 GDTMNTXXXXXXXXXXXXXXXXXDMEKSITGIVEVQMKEVEDKIVHFEEVELQMEREWKQ 1428
            G TM                   DMEK+I+ IV+VQMKE+ DK+  FEE ELQME+ +KQ
Sbjct: 479  GSTM-------------------DMEKAISHIVDVQMKEIVDKLNGFEEGELQMEKVFKQ 519

Query: 1429 LHYMKSLLFADQLTLSFQRSTTPLAMGESAS 1521
            L  MKS+LF DQL L F +      + E ++
Sbjct: 520  LDQMKSMLFVDQLNLLFNKECISTTVEEKSN 550


>ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 493

 Score =  357 bits (917), Expect = 4e-96
 Identities = 219/511 (42%), Positives = 281/511 (54%), Gaps = 21/511 (4%)
 Frame = +1

Query: 52   AKLVQNVTSPGQARMEIRLPITEQVNSLPNNQPTSLEIIPKAKKEPEALIDARSLESSPS 231
            A   Q+  SP  A +   L    ++ + P++   +   +P     PE L  + S      
Sbjct: 14   ASAKQSAPSPSPALVTPPL----KIETPPSDSGQTPSAVPAPTPRPEDLPQSTS------ 63

Query: 232  VTDVITIPSCSRWFSWDKVHESERRNLPEFFDKRSPSKNSRTYMYYRNSIINFFRENPSR 411
              D I +PS SRWFSW+ +HE E R LPEFFD RSPSKN R Y Y RNSI+  FRE PS+
Sbjct: 64   -PDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSK 122

Query: 412  KITFTQVRKVLVGDVGSIRRVFDFLEGWGLINYTGMTPKPQSKSDDKENRYDISLSK--- 582
            KITFT +RK LV DVGSIRRVFDFLE WGLINY+        K DD++++ + S S    
Sbjct: 123  KITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNTGE 182

Query: 583  -----------NETSTRFCSGCNKXXXXXXXXXXXXKLNMTLCARCYVGGEYRVNGVAST 729
                        + S R CSGC              K ++TLCARCYV G YRV    S+
Sbjct: 183  PGGGSANSSAPKDASKRVCSGCKS--ICSIACFACDKFDLTLCARCYVRGNYRVG--VSS 238

Query: 730  DDFRRVEISEQTKTEWTDKETLNLLEATMHYGDDWKKVAEHVGGRSEKECVARFIKLPFK 909
             DFRRVEI++ T+T+WTDKETL+LLEA  HYGDDWKKVA+HVGGR+E+ECVA+F+KLP  
Sbjct: 239  SDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLG 298

Query: 910  ERFIGPPGAEEVDKYGPTSTPSAAETGEESS---FPSSPAKKRRLTPFGDTSNPIMAQVA 1080
            E+F G P +E +D        ++A    ES+     S P K+ RL+P  D SNPIMAQ A
Sbjct: 299  EQFHGYPDSEHIDNNCTVKDEASANLTLESTGKIGTSIPNKRIRLSPLADASNPIMAQAA 358

Query: 1081 FLSAMXXXXXXXXXXXXXXXXXXXXNLTTDRRCLERIYTSPPDGKYQNESASDAND---- 1248
            FLS++                    +   D      I  +   G+  N++AS        
Sbjct: 359  FLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGEI--AIPVARNIGEQGNDAASHGGSCLSR 416

Query: 1249 GDTMNTXXXXXXXXXXXXXXXXXDMEKSITGIVEVQMKEVEDKIVHFEEVELQMEREWKQ 1428
            G TM                   DMEK+I+ IV VQMKE+ DK+  FEE ELQME+ +KQ
Sbjct: 417  GSTM-------------------DMEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFKQ 457

Query: 1429 LHYMKSLLFADQLTLSFQRSTTPLAMGESAS 1521
            L  MKS+LF DQL L F +      + E ++
Sbjct: 458  LDQMKSMLFVDQLNLLFNKECISTTVEEKSN 488


>ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 484

 Score =  354 bits (908), Expect = 5e-95
 Identities = 209/487 (42%), Positives = 280/487 (57%), Gaps = 23/487 (4%)
 Frame = +1

Query: 106  LPITEQVNSLPNNQPTSLEIIPKAKKEPEALIDARSLESSP-------SVTDVITIPSCS 264
            LP T +    P   P   +  P A + P A   A     +P       +  +VI +PS S
Sbjct: 9    LPSTTETPPAP---PPPKQPPPPAPQPPAAAAAAAVKPEAPLPDSKTSAEANVIVVPSYS 65

Query: 265  RWFSWDKVHESERRNLPEFFDKRSPSKNSRTYMYYRNSIINFFRENPSRKITFTQVRKVL 444
            RWFSWD + E E R+LPEFF+  S SK+ R Y YYRNSI+ +FR NP+RKITFT VRK L
Sbjct: 66   RWFSWDSIDECEARHLPEFFE--SASKSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTL 123

Query: 445  VGDVGSIRRVFDFLEGWGLINY--TGMTPKPQSKSDDKENRYDISLSKNETST------- 597
            VGDVGSIRRVFDFLE WGLINY  +    KP  K DDKE + D + +  E+S+       
Sbjct: 124  VGDVGSIRRVFDFLETWGLINYHPSSSLTKPL-KWDDKETKSDSASNSTESSSAPVKENT 182

Query: 598  -RFCSGCNKXXXXXXXXXXXXKLNMTLCARCYVGGEYRVNGVASTDDFRRVEISEQTKTE 774
             R CSGC              K ++TLCARCYV G YRV    ++ DFRRVEISE+TKT+
Sbjct: 183  KRLCSGCK--VVCTIACFACDKYDLTLCARCYVRGNYRVG--VNSSDFRRVEISEETKTD 238

Query: 775  WTDKETLNLLEATMHYGDDWKKVAEHVGGRSEKECVARFIKLPFKERF------IGPPGA 936
            W++KE  NLLEA  HYGDDWK+V++HV GR+EKECVA F+KLPF  +F          G 
Sbjct: 239  WSEKEITNLLEAISHYGDDWKRVSQHVPGRTEKECVAHFLKLPFANQFQHYQQHPAVNGT 298

Query: 937  EEVDKYGPTSTPSAAETGEESSFPSSPAKKRRLTPFGDTSNPIMAQVAFLSAMXXXXXXX 1116
            ++        T + AE+  ++   + P+K+ RLTP  D SNPIMAQ AFLSA+       
Sbjct: 299  DDGCNLLKMVTNADAESELDTVASAEPSKRMRLTPLADASNPIMAQAAFLSAL-----AG 353

Query: 1117 XXXXXXXXXXXXXNLTTDRRCLERIYTSPPDGKYQNESASDANDGDTMNTXXXXXXXXXX 1296
                          L+   +  +  Y + P      ++   +N G+T ++          
Sbjct: 354  SEVAQAAAQAALTTLSEVYKATKINYRAFPRNTLLQDAGITSNGGNTSDSFQGSRLHANI 413

Query: 1297 XXXXXXXDMEKSITGIVEVQMKEVEDKIVHFEEVELQMEREWKQLHYMKSLLFADQLTLS 1476
                   D+EK+I+ I+EVQMK ++DK+VHFE+++L ME+E +Q+  MK++ F DQLTL 
Sbjct: 414  QLEKEELDVEKAISEIIEVQMKNIQDKLVHFEDLDLLMEKEGQQMEQMKNMFFLDQLTLL 473

Query: 1477 FQRSTTP 1497
            F +S+ P
Sbjct: 474  FHKSSAP 480


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  351 bits (901), Expect = 3e-94
 Identities = 209/476 (43%), Positives = 277/476 (58%), Gaps = 24/476 (5%)
 Frame = +1

Query: 169  PKAKKEPEALIDARSLESSPSVTD--------VITIPSCSRWFSWDKVHESERRNLPEFF 324
            P  K+ P+ +  A +++    ++D        VI +PS SRWFSWD + E E R+LPEFF
Sbjct: 20   PPPKQPPQPVAAASAVKPEAPLSDSKASAEANVIVVPSYSRWFSWDSIDECEVRHLPEFF 79

Query: 325  DKRSPSKNSRTYMYYRNSIINFFRENPSRKITFTQVRKVLVGDVGSIRRVFDFLEGWGLI 504
            +  S SK+ R Y YYRNSI+ +FR NP+RKITFT VRK LVGDVGSIRRVFDFLE WGLI
Sbjct: 80   E--SASKSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETWGLI 137

Query: 505  NY--TGMTPKPQSKSDDKENRYDISLSKNETST--------RFCSGCNKXXXXXXXXXXX 654
            NY  +    KP  K DDKE + D + +  E+S+        R CSGC             
Sbjct: 138  NYHPSSSLTKPL-KWDDKETKSDSASNTTESSSAPAKENTKRLCSGCK--VVCTIACFAC 194

Query: 655  XKLNMTLCARCYVGGEYRVNGVASTDDFRRVEISEQTKTEWTDKETLNLLEATMHYGDDW 834
             K ++TLCARCYV G YRV    ++ DFRRVEISE+TKT+W +KET NLLEA  HY DDW
Sbjct: 195  DKYDLTLCARCYVRGNYRVG--VNSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDW 252

Query: 835  KKVAEHVGGRSEKECVARFIKLPFKERF----IGPPGAEEVDKYGPTS--TPSAAETGEE 996
            K+V++HV GR+EKECVA F+KLPF ++F      P      D   P    T + AE+  +
Sbjct: 253  KRVSQHVPGRTEKECVAHFLKLPFVDQFQHYQQHPAVNGTDDSCNPLKRVTNADAESELD 312

Query: 997  SSFPSSPAKKRRLTPFGDTSNPIMAQVAFLSAMXXXXXXXXXXXXXXXXXXXXNLTTDRR 1176
            +   + P K+ RLTP  D SNPIMAQ AFLSA+                     L+   +
Sbjct: 313  TVASAEPNKRMRLTPLADASNPIMAQAAFLSAL-----AGSEVAQAAAQAALTTLSEVYK 367

Query: 1177 CLERIYTSPPDGKYQNESASDANDGDTMNTXXXXXXXXXXXXXXXXXDMEKSITGIVEVQ 1356
              +  Y S P      ++   +N G+T ++                 D+EK+I+ I+EVQ
Sbjct: 368  ATKINYRSFPRNTLLQDAGIMSNGGNTSDSFQGSRLHANIQLEKEELDVEKAISEIIEVQ 427

Query: 1357 MKEVEDKIVHFEEVELQMEREWKQLHYMKSLLFADQLTLSFQRSTTPLAMGESASG 1524
            MK ++DK+V FE+++L ME+E +QL  MK++ F DQLTL F +S+ P   GE   G
Sbjct: 428  MKNIQDKLVQFEDLDLLMEKEGQQLEQMKNMFFLDQLTLLFHKSSAP-KTGECQEG 482