BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000007
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 1...   501   e-139
ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 1...   500   e-139
ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 1...   494   e-137
ref|XP_002330392.1| light-harvesting complex II protein Lhcb3 [P...   493   e-137
gb|AFK48392.1| unknown [Lotus japonicus]                              492   e-137

>ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera]
          Length = 269

 Score =  501 bits (1291), Expect = e-139
 Identities = 238/253 (94%), Positives = 245/253 (96%)
 Frame = +2

Query: 218 RPSQFLGTARGSNANSLRDVVAMGTGKFTMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFP 397
           RP+QFLG  RGSNAN LR+VV MGTGKFTM N+LWYGPDRVKYLGPFSAQTPSYLTGEFP
Sbjct: 17  RPTQFLGQTRGSNANQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFP 76

Query: 398 GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA 577
           GDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA
Sbjct: 77  GDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA 136

Query: 578 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGAVEGFRINGLPGVGDGNDLYPGGT 757
           GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMG VEG+RINGLPGVG+GNDLYPGG 
Sbjct: 137 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGP 196

Query: 758 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 937
           YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN
Sbjct: 197 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 256

Query: 938 NAWVYATKFVPGS 976
           NAW YATKFVPGS
Sbjct: 257 NAWAYATKFVPGS 269


>ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera] gi|147801944|emb|CAN77327.1|
           hypothetical protein VITISV_001096 [Vitis vinifera]
          Length = 269

 Score =  500 bits (1288), Expect = e-139
 Identities = 237/253 (93%), Positives = 245/253 (96%)
 Frame = +2

Query: 218 RPSQFLGTARGSNANSLRDVVAMGTGKFTMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFP 397
           RP+QF+G  RGSNAN LR+VV MGTGKFTM N+LWYGPDRVKYLGPFSAQTPSYLTGEFP
Sbjct: 17  RPTQFVGQTRGSNANQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFP 76

Query: 398 GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA 577
           GDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA
Sbjct: 77  GDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA 136

Query: 578 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGAVEGFRINGLPGVGDGNDLYPGGT 757
           GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMG VEG+RINGLPGVG+GNDLYPGG 
Sbjct: 137 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGP 196

Query: 758 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 937
           YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN
Sbjct: 197 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 256

Query: 938 NAWVYATKFVPGS 976
           NAW YATKFVPGS
Sbjct: 257 NAWAYATKFVPGS 269


>ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera]
          Length = 266

 Score =  494 bits (1272), Expect = e-137
 Identities = 233/253 (92%), Positives = 244/253 (96%)
 Frame = +2

Query: 218 RPSQFLGTARGSNANSLRDVVAMGTGKFTMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFP 397
           RP+ FLG  RG+N+N LRDVV MGTGK+TM N+LWYGPDRVKYLGPFSAQTPSYLTGEFP
Sbjct: 14  RPTPFLGQTRGANSNPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFP 73

Query: 398 GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA 577
           GDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGA GCITPEVLEKW++VDFKEP+WFKA
Sbjct: 74  GDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKA 133

Query: 578 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGAVEGFRINGLPGVGDGNDLYPGGT 757
           GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMG VEGFRINGLPGVGDGN+LYPGG 
Sbjct: 134 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQ 193

Query: 758 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 937
           YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN
Sbjct: 194 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 253

Query: 938 NAWVYATKFVPGS 976
           NAWVYATKFVPGS
Sbjct: 254 NAWVYATKFVPGS 266


>ref|XP_002330392.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
           gi|222871777|gb|EEF08908.1| light-harvesting complex II
           protein Lhcb3 [Populus trichocarpa]
          Length = 263

 Score =  493 bits (1268), Expect = e-137
 Identities = 237/253 (93%), Positives = 243/253 (96%)
 Frame = +2

Query: 218 RPSQFLGTARGSNANSLRDVVAMGTGKFTMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFP 397
           RP+ FLG  RGSNAN LRDVV+MG GK+ MSN+LWYGPDRVKYLGPFSAQTPSYLTGEFP
Sbjct: 12  RPTPFLGK-RGSNANPLRDVVSMGNGKYIMSNELWYGPDRVKYLGPFSAQTPSYLTGEFP 70

Query: 398 GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA 577
           GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVLEKWVKVDFKEPVWFKA
Sbjct: 71  GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKA 130

Query: 578 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGAVEGFRINGLPGVGDGNDLYPGGT 757
           GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMG VEGFRINGLPGVG+GNDLYPGG 
Sbjct: 131 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQ 190

Query: 758 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 937
           YFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN
Sbjct: 191 YFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 250

Query: 938 NAWVYATKFVPGS 976
           NAWVYATKFVPGS
Sbjct: 251 NAWVYATKFVPGS 263


>gb|AFK48392.1| unknown [Lotus japonicus]
          Length = 270

 Score =  492 bits (1267), Expect = e-137
 Identities = 233/253 (92%), Positives = 244/253 (96%)
 Frame = +2

Query: 218 RPSQFLGTARGSNANSLRDVVAMGTGKFTMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFP 397
           +PS FLG  +GSN+N+LRDVV+MGTGK+TM NDLWYGPDRVKYLGPFSAQTPSYLTGEFP
Sbjct: 18  KPSPFLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFP 77

Query: 398 GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKA 577
           GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVLEKWV+VDFKEPVWFKA
Sbjct: 78  GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKA 137

Query: 578 GAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGAVEGFRINGLPGVGDGNDLYPGGT 757
           G+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMG VEGFRINGLPGVG+GN+LYPG  
Sbjct: 138 GSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPGDQ 197

Query: 758 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 937
           YFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVAN
Sbjct: 198 YFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVAN 257

Query: 938 NAWVYATKFVPGS 976
           NAWVYATKFVPGS
Sbjct: 258 NAWVYATKFVPGS 270