BLASTX nr result

ID: Cimicifuga21_contig00000001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000001
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|2...   139   7e-31
ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored prot...   138   2e-30
emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]   138   2e-30
ref|XP_002514908.1| lipid binding protein, putative [Ricinus com...   138   2e-30
ref|XP_002890752.1| hypothetical protein ARALYDRAFT_890328 [Arab...   134   3e-29

>ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|222841226|gb|EEE78773.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  139 bits (351), Expect = 7e-31
 Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
 Frame = +2

Query: 146 QSLVIFTVLMFCVLHGSVFCAAPPT-VQAQCSSEFGRVGVCLNYATGKADTPAKDCCTTI 322
           QSL    VL+      S+F A     V  +CSS+F ++  CL+YA+GKA+TP KDCC ++
Sbjct: 4   QSLFFLGVLLLFAPSASLFRAVNGDGVTEECSSDFQKLMGCLSYASGKANTPTKDCCLSV 63

Query: 323 KDIKDKHAVCLCFIIQEVHDGSNSLKQLGLHEAKLIQLPTACNLVNASISDCPKLLGLTP 502
           ++IK+    CLCFI+Q+  +GS  +K LG+ EAKL+QLPTAC L NAS+S CPKLLG++P
Sbjct: 64  QNIKESDPKCLCFIMQQTSNGSAPIKNLGIQEAKLLQLPTACQLQNASLSFCPKLLGISP 123

Query: 503 DSPDYSIFNXXXXXXXXXXXXXXXXXXXXKDDSSMGIQHKP 625
            SPD +IF                     K   S G QH+P
Sbjct: 124 SSPDAAIFTNASTTATPAASTSTGTSQSEKAGDSSGFQHRP 164


>ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950 [Vitis
           vinifera]
          Length = 201

 Score =  138 bits (348), Expect = 2e-30
 Identities = 61/124 (49%), Positives = 89/124 (71%)
 Frame = +2

Query: 155 VIFTVLMFCVLHGSVFCAAPPTVQAQCSSEFGRVGVCLNYATGKADTPAKDCCTTIKDIK 334
           ++F + +  ++ GS   A   ++  QC++EF +V  CL++ATGKA TP KDCC+ + +I+
Sbjct: 16  LVFMISLSALISGS---AGAASLADQCANEFTKVSECLSFATGKAATPTKDCCSAVSEIR 72

Query: 335 DKHAVCLCFIIQEVHDGSNSLKQLGLHEAKLIQLPTACNLVNASISDCPKLLGLTPDSPD 514
           +   VCLC+ IQ+ H+GS  +K LG+ EAKL+QLP+ C L NAS+SDCPKLL ++  SPD
Sbjct: 73  ESKPVCLCYFIQQTHNGSAEVKSLGIQEAKLLQLPSDCKLANASLSDCPKLLNISASSPD 132

Query: 515 YSIF 526
           YSIF
Sbjct: 133 YSIF 136


>emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]
          Length = 201

 Score =  138 bits (348), Expect = 2e-30
 Identities = 61/124 (49%), Positives = 88/124 (70%)
 Frame = +2

Query: 155 VIFTVLMFCVLHGSVFCAAPPTVQAQCSSEFGRVGVCLNYATGKADTPAKDCCTTIKDIK 334
           ++F + +  ++ GS   A   ++  QC++EF +V  CL++ATGKA TP KDCC+ + +I+
Sbjct: 16  LVFMISLSALISGS---AGAASLADQCANEFTKVSECLSFATGKAATPTKDCCSAVSEIR 72

Query: 335 DKHAVCLCFIIQEVHDGSNSLKQLGLHEAKLIQLPTACNLVNASISDCPKLLGLTPDSPD 514
               VCLC+ IQ+ H+GS  +K LG+ EAKL+QLP+ C L NAS+SDCPKLL ++  SPD
Sbjct: 73  QSKPVCLCYFIQQTHNGSEQVKSLGIQEAKLLQLPSDCKLANASLSDCPKLLNISASSPD 132

Query: 515 YSIF 526
           YSIF
Sbjct: 133 YSIF 136


>ref|XP_002514908.1| lipid binding protein, putative [Ricinus communis]
           gi|223545959|gb|EEF47462.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 184

 Score =  138 bits (347), Expect = 2e-30
 Identities = 63/123 (51%), Positives = 86/123 (69%)
 Frame = +2

Query: 158 IFTVLMFCVLHGSVFCAAPPTVQAQCSSEFGRVGVCLNYATGKADTPAKDCCTTIKDIKD 337
           +F + +F +L  +    +   +  +CSSE  +V  CL+YA GK DTP K CC+ +KD+KD
Sbjct: 6   LFVLSVFLILSLNCCSVSSDNIAEECSSEVQKVMPCLDYAKGKIDTPPKGCCSAVKDMKD 65

Query: 338 KHAVCLCFIIQEVHDGSNSLKQLGLHEAKLIQLPTACNLVNASISDCPKLLGLTPDSPDY 517
               CLCFI+Q+ H+GS  +K LG+ EAKL+QLP+AC L NASIS CPKLLG+ P+SPD 
Sbjct: 66  SDPKCLCFIMQQTHNGSAEIKSLGIQEAKLLQLPSACQLQNASISFCPKLLGIPPNSPDA 125

Query: 518 SIF 526
           +IF
Sbjct: 126 AIF 128


>ref|XP_002890752.1| hypothetical protein ARALYDRAFT_890328 [Arabidopsis lyrata subsp.
           lyrata] gi|297336594|gb|EFH67011.1| hypothetical protein
           ARALYDRAFT_890328 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score =  134 bits (337), Expect = 3e-29
 Identities = 62/134 (46%), Positives = 87/134 (64%)
 Frame = +2

Query: 125 LNNMRTHQSLVIFTVLMFCVLHGSVFCAAPPTVQAQCSSEFGRVGVCLNYATGKADTPAK 304
           +  +  H  LV  T++           A    +  +CS +F +V +CL++ATGKA TP+K
Sbjct: 1   MKGLHLHLFLVTMTIVASIAAAAPAAPAGGGALADECSQDFQKVTLCLDFATGKATTPSK 60

Query: 305 DCCTTIKDIKDKHAVCLCFIIQEVHDGSNSLKQLGLHEAKLIQLPTACNLVNASISDCPK 484
            CC  ++DIK++   CLCF+IQ+   G  +LK LG+ E KLIQLPTAC L NASI++CPK
Sbjct: 61  KCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTACQLHNASITNCPK 120

Query: 485 LLGLTPDSPDYSIF 526
           LLGL+P SPD ++F
Sbjct: 121 LLGLSPSSPDAAVF 134


Top