BLASTX nr result
ID: Chrysanthemum22_contig00051411
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00051411
(514 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP71076.1| Retrovirus-related Pol polyprotein from transposo... 45 5e-09
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera] 44 1e-08
gb|PNX94124.1| retrovirus-related Pol polyprotein from transposo... 44 2e-08
dbj|GAU13373.1| hypothetical protein TSUD_175250 [Trifolium subt... 44 2e-08
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 46 3e-08
gb|PKU60283.1| Retrovirus-related Pol polyprotein from transposo... 43 4e-08
gb|PKU64446.1| Retrovirus-related Pol polyprotein from transposo... 45 5e-08
gb|PON75186.1| hypothetical protein PanWU01x14_045380, partial [... 47 5e-08
gb|PKU66636.1| Retrovirus-related Pol polyprotein from transposo... 44 8e-08
gb|PKU79678.1| Retrovirus-related Pol polyprotein from transposo... 42 1e-07
gb|PKU73010.1| Retrovirus-related Pol polyprotein from transposo... 42 1e-07
gb|OTF94842.1| putative zinc finger, CCHC-type [Helianthus annuus] 42 1e-07
gb|PKU73330.1| Retrovirus-related Pol polyprotein from transposo... 42 2e-07
gb|PRQ55598.1| putative RNA-directed DNA polymerase [Rosa chinen... 43 2e-07
ref|XP_020675955.1| uncharacterized protein LOC110094948 [Dendro... 42 3e-07
gb|PKU79126.1| Retrovirus-related Pol polyprotein from transposo... 42 3e-07
gb|PKU70451.1| Retrovirus-related Pol polyprotein from transposo... 45 3e-07
gb|PKU70985.1| Retrovirus-related Pol polyprotein from transposo... 43 4e-07
gb|OMO75820.1| Integrase, catalytic core [Corchorus capsularis] 42 4e-07
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 42 4e-07
>gb|KYP71076.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 337
Score = 44.7 bits (104), Expect(2) = 5e-09
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WL PY +KL PKSKPCVFLGY+ Q
Sbjct: 35 WLTPYTPNKLVPKSKPCVFLGYIPTQ 60
Score = 43.5 bits (101), Expect(2) = 5e-09
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -3
Query: 446 STYKCLDPTANRLYLSRHVDFVEDIFP 366
S Y CLDP +++++ SRHV FVEDIFP
Sbjct: 61 SAYYCLDPQSSKIFTSRHVQFVEDIFP 87
>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
Length = 1354
Score = 43.9 bits (102), Expect(2) = 1e-08
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WLRPY T KL P SKPCVFLGY
Sbjct: 672 WLRPYXTHKLTPXSKPCVFLGY 693
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -3
Query: 458 SLVTSTYKCLDPTANRLYLSRHVDFVEDIFP 366
SL S Y CLD + ++LY+SRHV FVE +FP
Sbjct: 694 SLSQSAYLCLDXSTSKLYVSRHVQFVESVFP 724
>gb|PNX94124.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1240
Score = 43.9 bits (102), Expect(2) = 2e-08
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WLRPY ++KL P+S+PC+F+GY Q
Sbjct: 527 WLRPYTSNKLQPRSQPCIFVGYADTQ 552
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFPLQLRNKHH 342
Y CLDPT N++Y SRHV F + IFP H
Sbjct: 555 YHCLDPTTNKIYTSRHVKFYDHIFPYNTYRPSH 587
>dbj|GAU13373.1| hypothetical protein TSUD_175250 [Trifolium subterraneum]
Length = 1296
Score = 43.9 bits (102), Expect(2) = 2e-08
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -3
Query: 458 SLVTSTYKCLDPTANRLYLSRHVDFVEDIFPLQ 360
S+ Y CL+P +NR+Y+SRHV+FVE+ FP Q
Sbjct: 610 SMSQHAYFCLEPLSNRIYVSRHVNFVENSFPYQ 642
Score = 42.0 bits (97), Expect(2) = 2e-08
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WL+PY +KL P+SKPC+F+GY
Sbjct: 588 WLKPYMKNKLQPRSKPCIFIGY 609
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 46.2 bits (108), Expect(2) = 3e-08
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -3
Query: 458 SLVTSTYKCLDPTANRLYLSRHVDFVEDIFPLQLRNKH 345
SL S Y CLD ++ R+Y SRHV FVED FP + + H
Sbjct: 813 SLTQSAYLCLDRSSGRVYTSRHVQFVEDQFPFSISDTH 850
Score = 39.3 bits (90), Expect(2) = 3e-08
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WLRPY KL +S+PCVFLGY
Sbjct: 791 WLRPYTNHKLERRSQPCVFLGY 812
>gb|PKU60283.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1314
Score = 42.7 bits (99), Expect(2) = 4e-08
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -3
Query: 452 VTSTYKCLDPTANRLYLSRHVDFVEDIFPLQLRNKH 345
V Y+CLDPT NR+Y S +V F E +FP Q R H
Sbjct: 736 VQKGYRCLDPTTNRIYTSCNVVFNEAVFPYQNRTSH 771
Score = 42.4 bits (98), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WL+PY+ +KL P S PCVF+GY VQ
Sbjct: 712 WLKPYSRNKLSPLSSPCVFIGYASVQ 737
>gb|PKU64446.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 792
Score = 44.7 bits (104), Expect(2) = 5e-08
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFP 366
YKCLDP N++Y+SRHV F EDIFP
Sbjct: 152 YKCLDPKTNKIYVSRHVVFNEDIFP 176
Score = 40.0 bits (92), Expect(2) = 5e-08
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WL+PYA K P S+PCVFLGY Q
Sbjct: 124 WLKPYAAHKFSPLSQPCVFLGYASNQ 149
>gb|PON75186.1| hypothetical protein PanWU01x14_045380, partial [Parasponia
andersonii]
Length = 157
Score = 46.6 bits (109), Expect(2) = 5e-08
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -3
Query: 458 SLVTSTYKCLDPTANRLYLSRHVDFVEDIFPLQLRNKH 345
SL S Y CLDP+ +++Y+SRH+ FVE IFP H
Sbjct: 66 SLTQSVYLCLDPSTSKIYISRHIKFVEHIFPFTSLQTH 103
Score = 38.1 bits (87), Expect(2) = 5e-08
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WLRPY+ KL +S PCVFLGY
Sbjct: 44 WLRPYSAHKLDSRSIPCVFLGY 65
>gb|PKU66636.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 874
Score = 44.3 bits (103), Expect(2) = 8e-08
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFPLQLRNKHHEF 336
YKCLD T N++Y+S HV F+E+ FP N H F
Sbjct: 225 YKCLDLTTNKVYISNHVIFIENCFPYASSNSLHSF 259
Score = 39.7 bits (91), Expect(2) = 8e-08
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WL+PY++ KL P S PCVF+GY Q
Sbjct: 197 WLKPYSSHKLSPISHPCVFIGYPQTQ 222
>gb|PKU79678.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 732
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WL+PY++SKL P S PCVF+GY Q
Sbjct: 124 WLKPYSSSKLSPLSTPCVFIGYATAQ 149
Score = 41.6 bits (96), Expect(2) = 1e-07
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFPLQLRNKH 345
Y+CL+PT R+Y+SRHV F E I+P +L H
Sbjct: 152 YRCLNPTTGRVYVSRHVIFNEAIYPYRLNAPH 183
>gb|PKU73010.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1382
Score = 42.4 bits (98), Expect(2) = 1e-07
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFPLQLRNK 348
Y+CLDP N +Y SRHV F E IFP Q +K
Sbjct: 725 YQCLDPNTNHIYTSRHVLFNEQIFPFQQSHK 755
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WLRPY++SKL SKPCVF+GY
Sbjct: 697 WLRPYSSSKLSSFSKPCVFIGY 718
>gb|OTF94842.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 990
Score = 41.6 bits (96), Expect(2) = 1e-07
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WLRPYA SKLH +S C+FLGY
Sbjct: 650 WLRPYAKSKLHNRSSKCIFLGY 671
Score = 41.6 bits (96), Expect(2) = 1e-07
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -3
Query: 446 STYKCLDPTANRLYLSRHVDFVEDIFPLQ 360
S YKC DP++ LY SRHV+FV+ +FP +
Sbjct: 676 SAYKCYDPSSQHLYHSRHVEFVDHMFPFK 704
>gb|PKU73330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1382
Score = 42.4 bits (98), Expect(2) = 2e-07
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WLRPY +KL P SKPCVF+GY Q
Sbjct: 701 WLRPYCKTKLGPLSKPCVFIGYASSQ 726
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFP 366
Y CLDP N++Y SRHV F E IFP
Sbjct: 729 YHCLDPNTNKIYTSRHVVFTEHIFP 753
>gb|PRQ55598.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 733
Score = 43.1 bits (100), Expect(2) = 2e-07
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVH 442
WLRPY T K P+S PC+F+GY H
Sbjct: 481 WLRPYTTHKFAPRSSPCIFIGYSH 504
Score = 39.7 bits (91), Expect(2) = 2e-07
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFPLQLRNKH 345
Y CLDP + R+Y SRHV F E FP + H
Sbjct: 509 YDCLDPISGRIYTSRHVQFDETSFPFKTHTAH 540
>ref|XP_020675955.1| uncharacterized protein LOC110094948 [Dendrobium catenatum]
Length = 826
Score = 42.4 bits (98), Expect(2) = 3e-07
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFPLQLRNKHHEF 336
YKCLD N++Y+S HV F+E+ FP N H F
Sbjct: 663 YKCLDLQTNKVYISNHVIFIENCFPYASSNSPHSF 697
Score = 39.7 bits (91), Expect(2) = 3e-07
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WL+PY++ KL P S PCVF+GY Q
Sbjct: 635 WLKPYSSHKLSPISHPCVFIGYPQTQ 660
>gb|PKU79126.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 429
Score = 42.4 bits (98), Expect(2) = 3e-07
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGYVHVQ 436
WLRPYA SKL SKPCVF+GY Q
Sbjct: 134 WLRPYAKSKLESFSKPCVFIGYPSTQ 159
Score = 39.7 bits (91), Expect(2) = 3e-07
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFPLQLRNKH 345
Y CLDP N +Y SRHV F E IFP H
Sbjct: 162 YLCLDPDTNHIYTSRHVVFNEQIFPYHQTQSH 193
>gb|PKU70451.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 476
Score = 44.7 bits (104), Expect(2) = 3e-07
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -3
Query: 458 SLVTSTYKCLDPTANRLYLSRHVDFVEDIFPLQLRNKH 345
S + Y+CLD +N++Y+SRHV F EDIFP + N++
Sbjct: 382 STMHKAYRCLDIQSNKVYISRHVTFQEDIFPFKTTNQN 419
Score = 37.4 bits (85), Expect(2) = 3e-07
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WL+PY +SKL +S+ CVFLGY
Sbjct: 360 WLKPYTSSKLASRSRECVFLGY 381
>gb|PKU70985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1379
Score = 42.7 bits (99), Expect(2) = 4e-07
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WL+PY TSKL P+S PC FLGY
Sbjct: 702 WLKPYTTSKLSPRSTPCTFLGY 723
Score = 38.9 bits (89), Expect(2) = 4e-07
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 440 YKCLDPTANRLYLSRHVDFVEDIFP 366
YKC DP +++Y+SRHV F E IFP
Sbjct: 730 YKCFDPQTDKMYISRHVIFHETIFP 754
>gb|OMO75820.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1430
Score = 41.6 bits (96), Expect(2) = 4e-07
Identities = 36/121 (29%), Positives = 50/121 (41%)
Frame = -3
Query: 446 STYKCLDPTANRLYLSRHVDFVEDIFPLQLRNKHHEFISLVRDACLKKSTQVNVGXXXXX 267
S Y CLD + +R+Y+SRHV F E+ FP N + I D + VNV
Sbjct: 906 SAYLCLDLSTDRIYVSRHVMFDEEKFPFTCLNTADKVIKSSYD-LWNPALDVNVD----- 959
Query: 266 XXXXXXTILTPSXXXXXXXXXNEQSCSNENLAGAHSLSATPSVETPISQSSPMATTIVEN 87
+ PS + + ENL AH+ +V +P+S SS A V
Sbjct: 960 --------IVPSPAAAAQQTPAQNA---ENLPSAHN----QTVASPVSSSSTSAVPAVSQ 1004
Query: 86 P 84
P
Sbjct: 1005 P 1005
Score = 40.0 bits (92), Expect(2) = 4e-07
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
WL+PY KL KSKPC+FLGY
Sbjct: 880 WLKPYTHHKLESKSKPCIFLGY 901
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 41.6 bits (96), Expect(2) = 4e-07
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -3
Query: 446 STYKCLDPTANRLYLSRHVDFVEDIFP 366
+ YKCLD ++NR+Y+SRHV F+E FP
Sbjct: 710 NAYKCLDLSSNRVYISRHVQFIEHKFP 736
Score = 40.0 bits (92), Expect(2) = 4e-07
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2
Query: 513 WLRPYATSKLHPKSKPCVFLGY 448
W+RPY+ KL +SKPCVFLGY
Sbjct: 684 WMRPYSDHKLDKRSKPCVFLGY 705