BLASTX nr result

ID: Chrysanthemum22_contig00051244 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00051244
         (403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021975928.1| copper transporter 1-like [Helianthus annuus...    62   3e-09
ref|XP_023758985.1| copper transporter 1-like [Lactuca sativa] >...    54   3e-06

>ref|XP_021975928.1| copper transporter 1-like [Helianthus annuus]
 gb|OTG19746.1| putative copper transporter 1 [Helianthus annuus]
          Length = 144

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 32/75 (42%), Positives = 39/75 (52%)
 Frame = +1

Query: 175 PPVMNGGNAXXXXXXXXXXXXXXTFYWGKDALILFTGWPGPNNSDMYMXXXXXXXXXXXI 354
           PP+M+G NA              TFYWGKDALILF GWPG  N+ MY            +
Sbjct: 5   PPMMHGRNATMGMPRKKKMMMHMTFYWGKDALILFKGWPG-TNTGMYALALVFVFFLALL 63

Query: 355 GEFLGYCNRVMMKSN 399
            E+L +CN  M KS+
Sbjct: 64  VEWLAHCNLKMTKSD 78


>ref|XP_023758985.1| copper transporter 1-like [Lactuca sativa]
 gb|PLY89072.1| hypothetical protein LSAT_9X24241 [Lactuca sativa]
          Length = 144

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 26/52 (50%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 166 MSIPPVMNGG--NAXXXXXXXXXXXXXXTFYWGKDALILFTGWPGPNNSDMY 315
           M+ PP+M  G                  TFYWGKDALILF GWPGPNN  MY
Sbjct: 1   MAPPPMMTNGVNGTTLGMPRRKRMIMHMTFYWGKDALILFKGWPGPNNIGMY 52


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