BLASTX nr result

ID: Chrysanthemum22_contig00051216 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00051216
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023752622.1| uncharacterized protein LOC111900986 [Lactuc...    54   4e-06

>ref|XP_023752622.1| uncharacterized protein LOC111900986 [Lactuca sativa]
 gb|PLY93936.1| hypothetical protein LSAT_6X4280 [Lactuca sativa]
          Length = 197

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -3

Query: 389 KSRQVEEAAKMNKNMEKFCENALSIYNVYAKGH 291
           K+RQVEE AK N+N+ K C NALSIYNVYAKG+
Sbjct: 165 KTRQVEEVAKKNENVRKLCSNALSIYNVYAKGN 197


Top