BLASTX nr result

ID: Chrysanthemum22_contig00050862 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00050862
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023768323.1| uncharacterized protein LOC111916902 [Lactuc...   101   5e-25
ref|XP_021999512.1| period circadian protein-like [Helianthus an...    93   2e-21

>ref|XP_023768323.1| uncharacterized protein LOC111916902 [Lactuca sativa]
 gb|PLY82056.1| hypothetical protein LSAT_9X98780 [Lactuca sativa]
          Length = 115

 Score =  101 bits (252), Expect = 5e-25
 Identities = 61/121 (50%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
 Frame = -3

Query: 378 MSTTKVTGIAMIMLRRHTLLNATRPPLCGVGSLGDCFASI------PEGGSDAVRGMEEK 217
           MS+TKVTGI M M+RRH LL A+RP L   G LG  FAS       PEG  +A   + ++
Sbjct: 1   MSSTKVTGIGM-MIRRHNLLYASRPALFANGQLGGGFASFSDSDSRPEGEGNA---LADR 56

Query: 216 AKQTTDDVLGAAKDTAHKLKDQAMGSRXXXXXXXXXXDQNHGVERTDSASEDVRDRPGGY 37
           AKQT   ++GAAKDT+  +KD+  G+             NHGVE+TDS+ EDVRDRPGGY
Sbjct: 57  AKQTMGKMMGAAKDTSENVKDRVTGANTSHPSKDPEL--NHGVEKTDSSCEDVRDRPGGY 114

Query: 36  S 34
           S
Sbjct: 115 S 115


>ref|XP_021999512.1| period circadian protein-like [Helianthus annuus]
 gb|OTG04597.1| hypothetical protein HannXRQ_Chr12g0364071 [Helianthus annuus]
          Length = 131

 Score = 92.8 bits (229), Expect = 2e-21
 Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 19/134 (14%)
 Frame = -3

Query: 378 MSTTKVTGIAMIMLRRHTLLNATRPPLCGVGSLGDCFASIP-----EGGSDAVRGMEEKA 214
           M +TK+  + +  +R+HTLL AT P   G G LG CF+ +      EGGS+   G+ +KA
Sbjct: 1   MYSTKIGAMIVCTIRQHTLLQATIPARSGNGLLGGCFSFVSTPPPSEGGSE---GVGDKA 57

Query: 213 KQTTDDVLGAAKDTAHKLKDQ--------------AMGSRXXXXXXXXXXDQNHGVERTD 76
           KQT D+VLGAAKD++ K+KD+                G+           D NHGVE TD
Sbjct: 58  KQTMDNVLGAAKDSSQKVKDRVTRTGTGTGTGTDTGTGTGTGMNNPSKDPDMNHGVETTD 117

Query: 75  SASEDVRDRPGGYS 34
           S+ EDVR RPGGY+
Sbjct: 118 SSCEDVRGRPGGYN 131


Top