BLASTX nr result

ID: Chrysanthemum22_contig00049960 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00049960
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10909.1| hypothetical protein Ccrd_010688 [Cynara carduncu...    54   4e-07
ref|XP_023745859.1| homeobox protein Hox-A3-like [Lactuca sativa...    53   2e-06

>gb|KVI10909.1| hypothetical protein Ccrd_010688 [Cynara cardunculus var. scolymus]
          Length = 92

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = +3

Query: 15  MASTKVLILCILVVALTHSSNLEA---RRLLNIPGLPSTGDSSFPMPTLQ 155
           MAS++++IL  L+VALT SSN EA   RRLLNIPGLP+ G  SFPMPTLQ
Sbjct: 1   MASSRLVIL-FLLVALTLSSNAEATMARRLLNIPGLPNMG--SFPMPTLQ 47


>ref|XP_023745859.1| homeobox protein Hox-A3-like [Lactuca sativa]
 gb|PLY64699.1| hypothetical protein LSAT_7X83801 [Lactuca sativa]
          Length = 103

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 32/50 (64%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = +3

Query: 15  MASTKVLILCILVVALTHSSNLEA---RRLLNIPGLPSTGDSSFPMPTLQ 155
           MAS+++LILC LV ALT S ++EA   RRLLNIPG PS G ++FP+PTLQ
Sbjct: 1   MASSRLLILCCLV-ALTLSYSMEAAMARRLLNIPGFPSMG-NTFPLPTLQ 48


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