BLASTX nr result

ID: Chrysanthemum22_contig00049925 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00049925
         (468 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88881.1| F-box associated interaction domain-containing pr...    62   3e-08
ref|XP_023768645.1| F-box/kelch-repeat protein At3g06240-like [L...    60   1e-07

>gb|KVH88881.1| F-box associated interaction domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 363

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
 Frame = +1

Query: 211 RGNLLFLSKYYTPHSLLLNHHHE---ISRPTNLLFKSHDPYLFTFYGSCNGFVFTSVWYS 381
           R +L+F+S  ++ +SL  +HH     + RP  L F  H   +FT YG CNG V  S    
Sbjct: 55  RNHLIFVSYDHSLYSLPFHHHEPAALVPRPKKLRFDLHH-VVFTLYGCCNGLVLVSAHNF 113

Query: 382 YNVHEFVVFNPTTKDFEELPKSGNEL 459
             +H  V+ NPTT++  ELP+S  E+
Sbjct: 114 DGLHSLVILNPTTREIMELPESNYEV 139


>ref|XP_023768645.1| F-box/kelch-repeat protein At3g06240-like [Lactuca sativa]
 gb|PLY81842.1| hypothetical protein LSAT_3X24620 [Lactuca sativa]
          Length = 361

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = +1

Query: 211 RGNLLFLSKYYTPHSLLLNHHHE--ISRPTNLLFKSHDPYLFTFYGSCNGFVFTSVWYSY 384
           R  L+F+S +   +SL  +H     +  PT +L +S+    F  +GSCNG V  S     
Sbjct: 55  RSQLIFVSNHRPLYSLPFHHDEAEAVLEPTKILLESYHTD-FNLHGSCNGLVLVSARTFA 113

Query: 385 NVHEFVVFNPTTKDFEELPKSGNELRN 465
           +VH  VV NPTTK+F ELP S  E+ N
Sbjct: 114 SVHVLVVLNPTTKEFVELPASDYEMIN 140


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