BLASTX nr result

ID: Chrysanthemum22_contig00049321 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00049321
         (816 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ47216.1| putative nucleotidyltransferase, Ribonuclease H [...   343   e-114
dbj|GAU49459.1| hypothetical protein TSUD_407480 [Trifolium subt...   366   e-113
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] >gi...   349   e-113
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   354   e-113
ref|XP_014628670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   365   e-112
gb|KYP31499.1| Retrotransposable element Tf2 [Cajanus cajan]          344   e-112
dbj|BAF25454.1| Os09g0491900 [Oryza sativa Japonica Group]            346   e-112
gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum]     357   e-111
gb|PKU84723.1| putative mitochondrial protein [Dendrobium catena...   354   e-111
gb|PNY17872.1| putative gag-pol polyprotein, partial [Trifolium ...   358   e-111
gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum]     353   e-110
gb|PKU75187.1| hypothetical protein MA16_Dca027667 [Dendrobium c...   334   e-109
gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Ja...   335   e-109
gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]          343   e-109
ref|XP_012472412.1| PREDICTED: uncharacterized protein LOC105789...   354   e-109
gb|PKI70610.1| hypothetical protein CRG98_008984 [Punica granatum]    327   e-108
gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   340   e-108
gb|AAP43919.1| integrase, partial [Gossypium hirsutum]                326   e-108
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   353   e-108
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   352   e-108

>gb|PRQ47216.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 373

 Score =  343 bits (879), Expect = e-114
 Identities = 160/263 (60%), Positives = 199/263 (75%), Gaps = 4/263 (1%)
 Frame = -3

Query: 814 HKLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYS 635
           HKL  RHAKWVE+LQA+TF IKHKSG+LN+ ADALSR+++ LN++Q KV G E+LK+ YS
Sbjct: 94  HKLNNRHAKWVEFLQAYTFHIKHKSGRLNQVADALSRRHSFLNTMQVKVSGFEILKEQYS 153

Query: 634 SDPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
            DP F +++  C     G Y L  G+LF+G R+CIP  S+R  +I E H GGL    G D
Sbjct: 154 EDPFFKQIWTKCSKGPVGSYLLQEGYLFKGNRLCIPEGSLRENIITETHAGGLAGHFGRD 213

Query: 466 KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
           KTL++++ HF+WP++ RDV   V RC  CH AK      GLY PLPVP APWEDVSLDF+
Sbjct: 214 KTLSLVKEHFYWPRLERDVARHVERCRTCHMAKSQGQNTGLYTPLPVPTAPWEDVSLDFV 273

Query: 286 IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
            GLP+TQR KDSIMVVVDRFSKM+HFI C+ T DA  VA+LYFKE+V+LHGIPKT+ SDR
Sbjct: 274 TGLPQTQRNKDSIMVVVDRFSKMSHFIPCNKTNDASHVADLYFKEVVKLHGIPKTITSDR 333

Query: 106 DVKFLSHFWITLWRKMGTQLKFS 38
           D KF+ HFW TLWRK+GT+L+F+
Sbjct: 334 DSKFVGHFWRTLWRKLGTKLQFT 356


>dbj|GAU49459.1| hypothetical protein TSUD_407480 [Trifolium subterraneum]
          Length = 1464

 Score =  366 bits (939), Expect = e-113
 Identities = 174/274 (63%), Positives = 213/274 (77%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL PRHAKWVE+LQ+F F+ K+K GK N  ADALSR+YAL++ L+ +++G E LK  Y  
Sbjct: 800  KLSPRHAKWVEFLQSFNFSSKYKDGKSNVVADALSRRYALISILETRLLGFETLKDYYKE 859

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            D DFGE++ +C+N A GKY +  GFLF+  R+CIPRHSIR +L++E H GGL    GI K
Sbjct: 860  DVDFGEIYSNCENGAFGKYIVQGGFLFKENRLCIPRHSIRELLVREAHGGGLAGHFGITK 919

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TL +L+ HF WPKM+ DV+  + +C+ CH AK  SF  G Y PLP P  PW DVS+DFI+
Sbjct: 920  TLEILKEHFHWPKMLGDVQKVISKCVTCHMAKS-SFKPGAYTPLPTPSGPWMDVSMDFIV 978

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
             LPRTQR KD+IMVVVDRFSKMAHF+ACH T DA  VA+LYF+EIVRLHG+PKT+VSDRD
Sbjct: 979  ALPRTQRGKDAIMVVVDRFSKMAHFVACHKTDDASNVADLYFREIVRLHGVPKTIVSDRD 1038

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
             KFLS+FW TLWRK+GT+L FSTS HPQTDGQTE
Sbjct: 1039 SKFLSYFWNTLWRKLGTKLLFSTSHHPQTDGQTE 1072


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
 gb|AAU44123.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 681

 Score =  349 bits (895), Expect = e-113
 Identities = 164/275 (59%), Positives = 208/275 (75%), Gaps = 5/275 (1%)
 Frame = -3

Query: 811 KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
           KL  RHAKWVE+++ F + +K+K GK N  ADALSRK  LLN L+ KV G+E +K+ YS+
Sbjct: 64  KLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSA 123

Query: 631 DPDFGELFRSCQ-NHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
           D DF E +  C       KYH+ +GFLFR  ++C+P  S+R++L++E H GGL    G  
Sbjct: 124 DLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWR 183

Query: 466 KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
           KT  ML +HF+WPKM RDV+  V+RC+ CH+AK    PHGLY PLPVP APWED+S+DF+
Sbjct: 184 KTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFV 243

Query: 286 IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
           +GLPRT+R +DSI VVVDRFSKMAHFI CH + DA  +A+L+F EIVRLHG+PKT+VSDR
Sbjct: 244 LGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDR 303

Query: 106 DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
           D KFLS+FW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 304 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTE 338


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  354 bits (909), Expect = e-113
 Identities = 165/275 (60%), Positives = 210/275 (76%), Gaps = 5/275 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL  RHAKWVE++++F + IKHK GK N  ADALSR+YA+L+ L  K+ GLE +K+ Y+ 
Sbjct: 434  KLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAH 493

Query: 631  DPDFGELFRSCQNHAT-GKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
            D DF ++  +C    T  K+ L+NGF+FR  ++CIP  S+R++L++E H GGL    G+ 
Sbjct: 494  DDDFKDVLLNCMEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVK 553

Query: 466  KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
            KT  +L +HFFWPKM RDVE FV RC  C +AK    PHGLYMPLPVP  PWED+S+DF+
Sbjct: 554  KTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 613

Query: 286  IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
            +GLPRT++ +DSI VVVDRFSKMAHFI CH + DA  VA+L+F+EIVRLHG+P T+VSDR
Sbjct: 614  LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 673

Query: 106  DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            D KFLSHFW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 674  DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTE 708


>ref|XP_014628670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106797892,
            partial [Glycine max]
          Length = 2239

 Score =  365 bits (937), Expect = e-112
 Identities = 174/274 (63%), Positives = 213/274 (77%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL PRHAKWVE+LQ+F F+ K+K GK N  ADALSR+YAL++ L+ +++G E LK  Y  
Sbjct: 427  KLSPRHAKWVEFLQSFNFSSKYKDGKSNVVADALSRRYALISILETRLLGFETLKDYYKE 486

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            D DFGE++ +C+N A GKY + +GFLF+  R+CIPRHSIR +L++E H GGL    GI K
Sbjct: 487  DVDFGEIYSNCENGAFGKYIVQDGFLFKENRLCIPRHSIRELLVREAHGGGLAGHFGITK 546

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TL +L+ HF WPKM+ DV+  + RC+ CH AK  SF  G Y PLP P  PW DVS+DFI+
Sbjct: 547  TLEILKEHFHWPKMLGDVQKVISRCVTCHMAKS-SFKPGAYTPLPTPSGPWMDVSMDFIV 605

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
             LPRTQR KD+IMVVVDRFSKMAHF+ACH T DA  VA+LYF+EIVRLHG+PKT+VSD D
Sbjct: 606  ALPRTQRGKDAIMVVVDRFSKMAHFVACHKTDDASNVADLYFREIVRLHGVPKTIVSDHD 665

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
             KFLS+FW TLWRK+GT+L FSTS HPQTDGQTE
Sbjct: 666  SKFLSYFWNTLWRKVGTKLLFSTSHHPQTDGQTE 699



 Score =  331 bits (849), Expect = e-100
 Identities = 155/274 (56%), Positives = 199/274 (72%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL  RHAKWVE+L+ F + IKHK GK N  ADALSR++ALL+ L+ K+IGLE LK  Y +
Sbjct: 1771 KLNKRHAKWVEFLEQFPYVIKHKKGKGNIVADALSRRHALLSMLETKLIGLECLKSMYEN 1830

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            D  FGE+F++C+  +   +    GFLF+  ++C+P+ S R +L+ E H GGL    G+ K
Sbjct: 1831 DETFGEIFKNCEKFSENGFFRHEGFLFKENKLCVPKCSTRNLLVCEAHXGGLMGHFGVQK 1890

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TL  LQ HF+WP M +DV+ F   C+ C +AK    PHGLY PLP+P  PW D+S+DF++
Sbjct: 1891 TLETLQEHFYWPHMKKDVQKFCEHCIVCKKAKSKVKPHGLYTPLPIPEYPWIDLSMDFVL 1950

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
            GLP+T   +DSI VVVDRFSKMAHFI C    DA  VA+L+FKEIVRLHG+P+++V DRD
Sbjct: 1951 GLPKTSNGRDSIFVVVDRFSKMAHFIPCKKVDDASHVADLFFKEIVRLHGLPRSIVRDRD 2010

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
             KFLSHFW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 2011 SKFLSHFWRTLWSKLGTKLLFSTTCHPQTDGQTE 2044


>gb|KYP31499.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 599

 Score =  344 bits (882), Expect = e-112
 Identities = 160/275 (58%), Positives = 205/275 (74%), Gaps = 4/275 (1%)
 Frame = -3

Query: 814 HKLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYS 635
           HKL  RHAKWVEYL+ F + IK+K G  N  ADALSR++ LLN+L  +++G + +K+ Y 
Sbjct: 83  HKLNKRHAKWVEYLEQFPYVIKYKKGSTNVVADALSRRHVLLNTLGSQILGFDDIKELYE 142

Query: 634 SDPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
            D DF   +  C       Y++S G+LF+  ++CIP+ SIR +L+KE+HEGGL    GI+
Sbjct: 143 KDLDFANFYSLCIQKPYQGYYISEGYLFKENKLCIPQGSIRKLLVKESHEGGLMGHFGIE 202

Query: 466 KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
           KTL++L+  FFWP M RDV+ F   C+ C +AK  + PHGLY PLP+  +PW D+S+DFI
Sbjct: 203 KTLSLLREKFFWPHMKRDVQRFCSSCIACLQAKSTTKPHGLYTPLPISTSPWVDISMDFI 262

Query: 286 IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
           +GLPRTQR KDSI VVVDRFSKMAHFI CH   DA  +A L+F+EIVRLHG+PKT+VSDR
Sbjct: 263 LGLPRTQRGKDSIFVVVDRFSKMAHFIPCHKVDDASNIAKLFFQEIVRLHGLPKTIVSDR 322

Query: 106 DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
           DVKFLSHFW TLW ++GT+L FST+ HPQTDGQTE
Sbjct: 323 DVKFLSHFWKTLWARLGTKLLFSTTCHPQTDGQTE 357


>dbj|BAF25454.1| Os09g0491900 [Oryza sativa Japonica Group]
          Length = 681

 Score =  346 bits (888), Expect = e-112
 Identities = 163/275 (59%), Positives = 207/275 (75%), Gaps = 5/275 (1%)
 Frame = -3

Query: 811 KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
           KL  RHAKWVE+++ F + +K+K GK N  ADALSRK  LLN L+ KV G+E +K+ Y +
Sbjct: 64  KLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVPGIESIKELYPA 123

Query: 631 DPDFGELFRSCQ-NHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
           D DF E +  C       KYH+ +GFLFR  ++C+P  S+R++L++E H GGL    G  
Sbjct: 124 DLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWR 183

Query: 466 KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
           KT  ML +HF+WPKM RDV+  V+RC+ CH+AK    PHGLY PLPVP APWED+S+DF+
Sbjct: 184 KTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFV 243

Query: 286 IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
           +GLPRT+R +DSI VVVDRFSKMAHFI CH + DA  +A+L+F EIVRLHG+PKT+VSDR
Sbjct: 244 LGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDR 303

Query: 106 DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
           D KFLS+FW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 304 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTE 338


>gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1207

 Score =  357 bits (916), Expect = e-111
 Identities = 173/274 (63%), Positives = 209/274 (76%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL+ RHA WVEYL AF F +KHKSGKLN+ ADALSR+  LL +LQ KV G E+LK+ Y  
Sbjct: 749  KLKGRHAAWVEYLGAFHFVLKHKSGKLNQVADALSRRVILLQTLQTKVTGFEILKELYPQ 808

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHE----GGLGIDK 464
            DPDFGEL+  C       YH     LF G R+C+P+ S R+++I+E HE    G  G DK
Sbjct: 809  DPDFGELWSKCLETPYKFYHRQQEHLFYGNRLCVPQGSTRLVIIRECHESSIAGHFGRDK 868

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TLA++Q HFFWP + RDV+ F++RC  C  AK  S   GLY+PLPVP  PW DVSLDF++
Sbjct: 869  TLALVQEHFFWPSLNRDVDRFIKRCRICVIAKTQSKKLGLYIPLPVPDGPWTDVSLDFVL 928

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
            GLPRTQR KDSIMVVVDRFSKM+HFIAC+ T DA  +A+LYFKEIVRLHGIP+T+ SDRD
Sbjct: 929  GLPRTQRNKDSIMVVVDRFSKMSHFIACNKTLDASHIADLYFKEIVRLHGIPRTITSDRD 988

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            VKFLSHFW TLW K+GT+L+FS+++HPQTDGQTE
Sbjct: 989  VKFLSHFWRTLWAKLGTKLQFSSTAHPQTDGQTE 1022


>gb|PKU84723.1| putative mitochondrial protein [Dendrobium catenatum]
          Length = 1067

 Score =  354 bits (909), Expect = e-111
 Identities = 172/274 (62%), Positives = 207/274 (75%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL+ RHA WVE+L AF + +KHKSGK N+ ADALSR+ AL+  LQ KVI  ELLK+ Y +
Sbjct: 609  KLKGRHAAWVEFLGAFHYVLKHKSGKCNQVADALSRRTALIQVLQTKVIEFELLKELYPA 668

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            D DFGE++  CQ      YH   G LF G ++CIP+ S R+ +I+E HE  +    G DK
Sbjct: 669  DSDFGEIWSKCQEKPYKLYHCQQGHLFHGNKLCIPQGSTRLAIIRECHESSIADHFGRDK 728

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TLA++Q HFFWP + RDV+ F+RRC  C  AK HS   GLY PLPVP  PW +VSLDF++
Sbjct: 729  TLALIQEHFFWPLLSRDVDRFLRRCRVCVLAKTHSQKLGLYTPLPVPEGPWLEVSLDFVL 788

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
            GLPRTQR KDSIMVVVDRFSKM HFIAC+ T DA  VA+LYFKEIVRLHGIPKT+ SDRD
Sbjct: 789  GLPRTQRNKDSIMVVVDRFSKMTHFIACNKTLDASHVADLYFKEIVRLHGIPKTITSDRD 848

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            VKFLSHFW T+W K+GT+L FS+++HPQTDGQTE
Sbjct: 849  VKFLSHFWRTIWAKLGTKLLFSSTAHPQTDGQTE 882


>gb|PNY17872.1| putative gag-pol polyprotein, partial [Trifolium pratense]
          Length = 1414

 Score =  358 bits (920), Expect = e-111
 Identities = 165/274 (60%), Positives = 212/274 (77%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL+ RHAKW+E+++ F + IK+K GK N  ADALSR+YALL SLQ K++G E +K  YS+
Sbjct: 926  KLQKRHAKWLEFIEMFPYVIKYKDGKENVVADALSRRYALLTSLQTKLLGFEFVKDLYSN 985

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            D DFG +  SC  HA G Y++ +G+LF+  ++C+P  S+R ML++E+H GGL    G+ K
Sbjct: 986  DSDFGNICESCSKHAFGDYYMHDGYLFKKNKLCVPVCSLREMLVRESHGGGLMGHFGVKK 1045

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TL +LQ HF+WPKM++DV+    +C+PC +AK    PHGLY PL VP  PW DVS+DF++
Sbjct: 1046 TLEILQEHFYWPKMMQDVQSVCVKCVPCKQAKSKIMPHGLYTPLHVPSQPWTDVSMDFVL 1105

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
            GLPR+Q  KDSI VVVDRFSKMAHFIAC  T DA  +A+L+FKE+VRLHG+PKT+VSDRD
Sbjct: 1106 GLPRSQGGKDSIFVVVDRFSKMAHFIACSKTNDATHIADLFFKEVVRLHGLPKTIVSDRD 1165

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            VKFLSHFW TLW K+GT+L FST +HPQTDGQTE
Sbjct: 1166 VKFLSHFWRTLWNKLGTKLLFSTVAHPQTDGQTE 1199


>gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1164

 Score =  353 bits (906), Expect = e-110
 Identities = 165/274 (60%), Positives = 211/274 (77%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KLR RHA W E+L AF F +KHKSGK N+ ADALSR+YALL ++Q +++G + +K+ Y++
Sbjct: 696  KLRGRHATWAEFLSAFQFVLKHKSGKDNQVADALSRRYALLQTVQAQLVGFDAIKEMYAA 755

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            DPDFGE++R CQ      ++L   FLF+   ICIP  S+R+ +I E H+GGL    G DK
Sbjct: 756  DPDFGEIWRKCQQAPYQLFYLKEDFLFKSLSICIPDCSLRLAVIAECHDGGLSGHFGRDK 815

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TL + +  FFWP + RDV  ++R C  C RAK      GLY PLP+P+ PW+DVS+DF++
Sbjct: 816  TLFLTREKFFWPNIKRDVTRYIRSCQVCRRAKTTLTNAGLYSPLPIPLRPWDDVSMDFVV 875

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
            GLPRTQR KDSIMVVVDRFSKM+HFIACH T DA  +++LYFKEIVRLHGIP+T+VSDRD
Sbjct: 876  GLPRTQRNKDSIMVVVDRFSKMSHFIACHKTLDATHISDLYFKEIVRLHGIPRTIVSDRD 935

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            VKFLSHFW TLW K+GT+L+FS+++HPQTDGQTE
Sbjct: 936  VKFLSHFWRTLWGKLGTRLQFSSAAHPQTDGQTE 969


>gb|PKU75187.1| hypothetical protein MA16_Dca027667 [Dendrobium catenatum]
          Length = 491

 Score =  334 bits (856), Expect = e-109
 Identities = 158/274 (57%), Positives = 204/274 (74%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811 KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
           KL+ RHAKW E+L AF + +KHK+G  N+ ADALSR++ LL +LQ KV+G E+++  Y+ 
Sbjct: 121 KLKARHAKWSEFLSAFHYVLKHKAGHSNQVADALSRRHLLLQTLQTKVVGFEVIQDLYAK 180

Query: 631 DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGLG----IDK 464
           D +FG +++ C       +H+SNG+LF  QR+CIP  S+R+ LI E+HEG L      +K
Sbjct: 181 DAEFGPIWQQCLQGPFKLFHISNGYLFFKQRLCIPNCSLRLTLISESHEGDLAGHFEREK 240

Query: 463 TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
           + A+L  +F+WP + + V  FVR C  C RAK  S   G+Y PLPVP +PW D+SLDF++
Sbjct: 241 SEALLGENFYWPSLSKHVGRFVRSCSVCKRAKTSSTNAGMYTPLPVPSSPWVDISLDFVV 300

Query: 283 GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
           GLPRTQR KDSIMVVVDRFSKM HF+ C  T DA  VA+L+FKEIVRLHGIPKT+ SDRD
Sbjct: 301 GLPRTQRNKDSIMVVVDRFSKMVHFVPCQKTLDATHVADLFFKEIVRLHGIPKTITSDRD 360

Query: 103 VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
           VKFLSHFW TLW K GT+L+FS+++HPQTDGQTE
Sbjct: 361 VKFLSHFWRTLWGKFGTKLQFSSAAHPQTDGQTE 394


>gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Japonica Group]
          Length = 540

 Score =  335 bits (859), Expect = e-109
 Identities = 155/270 (57%), Positives = 202/270 (74%), Gaps = 5/270 (1%)
 Frame = -3

Query: 796 HAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSSDPDFG 617
           HAKWVE++++F + IKHK GK N  ADALSR+Y  L+ L  ++ GLE +K+ Y+ DPDF 
Sbjct: 21  HAKWVEFIESFPYVIKHKKGKDNVIADALSRRYTFLSQLDCRIFGLESIKEQYALDPDFN 80

Query: 616 ELFRSCQNHAT-GKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDKTLAM 452
           E+  +C+   T  K+ ++ GF++R  R+CIP  S+R++LI+E H GGL    G  KT  +
Sbjct: 81  EVMINCKEGRTWNKFVINGGFVYRANRLCIPVGSVRLLLIQEAHGGGLTGHFGAKKTEDV 140

Query: 451 LQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFIIGLPR 272
           L  HFFWP+M +D+E FV RC  C +AK    PHGLYMPLPVP  PW D+S+DF++GLPR
Sbjct: 141 LAMHFFWPRMRKDIERFVARCTTCQKAKSRLNPHGLYMPLPVPSIPWADISMDFVLGLPR 200

Query: 271 TQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRDVKFL 92
           T+R +DSI VVVDRFSKMAHFI CH + DAV +A+++F +IVRLHG+P T+VSD D KFL
Sbjct: 201 TKRGRDSIFVVVDRFSKMAHFIPCHKSDDAVHIADMFFHKIVRLHGMPSTIVSDSDAKFL 260

Query: 91  SHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
           SHFW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 261 SHFWRTLWNKLGTKLLFSTTCHPQTDGQTE 290


>gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 839

 Score =  343 bits (880), Expect = e-109
 Identities = 160/275 (58%), Positives = 205/275 (74%), Gaps = 4/275 (1%)
 Frame = -3

Query: 814  HKLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYS 635
            HKL  RHAKWVEYL+ F + IK+K G  N  ADALSR++ LLN+L  +++G + +K+ Y 
Sbjct: 323  HKLNKRHAKWVEYLEQFPYVIKYKKGSTNVVADALSRRHVLLNTLGSQILGFDDIKELYE 382

Query: 634  SDPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
             D DF   +  C       Y++S GFLF+  ++CIP+ SIR +L++E+HEGGL    GI+
Sbjct: 383  KDLDFANFYSLCIQKPYQGYYISEGFLFKENKLCIPQGSIRKLLVRESHEGGLMGHFGIE 442

Query: 466  KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
            KTL++L+  FFWP M RDV+ F   C+ C +AK  + PHGLY PLP+  +PW D+S+DFI
Sbjct: 443  KTLSLLREKFFWPHMKRDVQRFCSSCIACLQAKSTTKPHGLYTPLPISSSPWVDISMDFI 502

Query: 286  IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
            +GLPRTQR KDSI VVVDRFSKMAHFI CH   DA  +A L+F+EIVRLHG+PKT+VSDR
Sbjct: 503  LGLPRTQRGKDSIFVVVDRFSKMAHFIPCHKVDDASNIAKLFFQEIVRLHGLPKTIVSDR 562

Query: 106  DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            DVKFLSHFW TLW ++GT+L FST+ HPQTDGQTE
Sbjct: 563  DVKFLSHFWKTLWARLGTKLLFSTTCHPQTDGQTE 597


>ref|XP_012472412.1| PREDICTED: uncharacterized protein LOC105789586 [Gossypium raimondii]
          Length = 1596

 Score =  354 bits (909), Expect = e-109
 Identities = 167/274 (60%), Positives = 207/274 (75%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL  RHAKWVEYL++F + IK+K GK N  ADALSR+YAL+N +  K++G E LK  Y S
Sbjct: 1097 KLNKRHAKWVEYLESFLYVIKYKKGKENVVADALSRRYALVNLMDSKLLGFEFLKDLYKS 1156

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            D DFGE++ SC + A  KY    G+LFR  ++C+P+ S+R +L++E H GGL    GI K
Sbjct: 1157 DADFGEIYESCSHGAGEKYFQHEGYLFREGKLCVPQSSVRNVLVEEAHSGGLMGHFGIAK 1216

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TLA+L  HF+WPKM RDV     RC+ C +AK    PHGLY PLP+P APW D+S+DF++
Sbjct: 1217 TLAILHEHFYWPKMKRDVIRKCDRCITCKKAKSRIKPHGLYTPLPIPDAPWVDISMDFVL 1276

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
            GLPRT+R +DSI VVVDRFSKMAHFI C+ T DA  VANL+FKE+VRLHGIP+T+VSDRD
Sbjct: 1277 GLPRTKRGRDSIFVVVDRFSKMAHFIPCNKTDDATNVANLFFKEVVRLHGIPRTIVSDRD 1336

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
             KFLSHFW TLW K+GT+L F T+ HPQTDGQTE
Sbjct: 1337 TKFLSHFWRTLWGKLGTKLLFLTTCHPQTDGQTE 1370


>gb|PKI70610.1| hypothetical protein CRG98_008984 [Punica granatum]
          Length = 340

 Score =  327 bits (837), Expect = e-108
 Identities = 153/275 (55%), Positives = 204/275 (74%), Gaps = 4/275 (1%)
 Frame = -3

Query: 814 HKLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYS 635
           HKL  RHA+WVE+++ F + I++K GK N  ADALSR+YALL++L  K++G E +K  Y+
Sbjct: 63  HKLNKRHARWVEFIETFPYVIQYKQGKENVVADALSRRYALLSTLDAKLLGFEHIKNLYA 122

Query: 634 SDPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
            D +F E +R+C+    GK+   +GFLFR  ++C+P  S R +L++E+H GGL    G+ 
Sbjct: 123 DDHEFCEEYRACEKIPYGKFFRHDGFLFRENKLCVPNCSPRELLVQESHGGGLMGHFGVA 182

Query: 466 KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
           KTLA+LQ HF+WP + RDVE    RC+   +AK    P+GLY PLP+P   W D+S+DF+
Sbjct: 183 KTLAILQEHFYWPHVKRDVERICGRCITWRQAKSRVQPNGLYTPLPIPSELWIDISMDFV 242

Query: 286 IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
           +GLPRT+  +DSI VVVDRFSKMAHFI CH T DA  VA+L+F+EIVRLHG+P+T+ SDR
Sbjct: 243 LGLPRTKHGRDSIFVVVDRFSKMAHFIPCHKTDDASHVADLFFREIVRLHGMPRTIASDR 302

Query: 106 DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
           D KFLS+FW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 303 DAKFLSYFWKTLWCKLGTKLLFSTTCHPQTDGQTE 337


>gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 797

 Score =  340 bits (873), Expect = e-108
 Identities = 160/274 (58%), Positives = 200/274 (72%), Gaps = 4/274 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL  RHAKWVE+L+ F + IKHK GK N  ADALSR++ LL+ L+ K+ GLE LK  Y  
Sbjct: 324  KLNKRHAKWVEFLEQFPYVIKHKKGKGNVVADALSRRHNLLSMLETKLFGLESLKDMYMH 383

Query: 631  DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
            D DF E F +C+  +   Y+  NGFLF+  R+C+P+ SIR +L+ E+HEGGL    G+ K
Sbjct: 384  DVDFAENFAACEKFSENGYYRHNGFLFKANRLCVPKCSIRELLVSESHEGGLMGHFGVQK 443

Query: 463  TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
            TL +LQ HF+WP M  DV  F   C+ C +AK    PHGLY PLPVP  PW D+S+DF++
Sbjct: 444  TLEILQEHFYWPHMKHDVHKFCDHCIVCKKAKSKVKPHGLYTPLPVPDFPWIDISMDFVL 503

Query: 283  GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
            GLPRT+  KDSI VVVDRFSKMAHFI C    DA  VA+L+F+E+VRLHG+P+++VSDRD
Sbjct: 504  GLPRTKNGKDSIFVVVDRFSKMAHFIPCKKVNDACHVADLFFREVVRLHGLPRSIVSDRD 563

Query: 103  VKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
             KFLSHFW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 564  TKFLSHFWRTLWGKLGTKLLFSTTCHPQTDGQTE 597


>gb|AAP43919.1| integrase, partial [Gossypium hirsutum]
          Length = 334

 Score =  326 bits (835), Expect = e-108
 Identities = 152/271 (56%), Positives = 200/271 (73%), Gaps = 4/271 (1%)
 Frame = -3

Query: 811 KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
           KL  RHA+WVE+++ F + I++K G  N  ADALSR+Y L+ +L  KV+G E +K+ Y  
Sbjct: 64  KLSKRHARWVEFIETFPYMIQYKIGNDNVVADALSRRYTLITTLNAKVLGFEHIKELYDD 123

Query: 631 DPDFGELFRSCQNHATGKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GIDK 464
           D DF  ++++C + A  K++L +G LFR  R+CIP+ S+R +LI E H GGL    G+ K
Sbjct: 124 DTDFSHIYKNCGHTAFEKFYLVDGLLFRLNRLCIPKCSMRELLIHEAHSGGLMGHFGVAK 183

Query: 463 TLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFII 284
           TL +LQ HF WP M +DVE    +C+ C +AK     HGLY PLP+P +PW D+S+DFI+
Sbjct: 184 TLDILQEHFHWPHMKKDVEKVCSKCITCKQAKSKVMLHGLYTPLPIPTSPWVDLSMDFIL 243

Query: 283 GLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDRD 104
           GLPRT++ +DSI VVVDRFSKM+HFI CH T DA  VA+L+FKE+VRLHGIPKT+VSDRD
Sbjct: 244 GLPRTKKGRDSIFVVVDRFSKMSHFIPCHKTDDATHVADLFFKEVVRLHGIPKTIVSDRD 303

Query: 103 VKFLSHFWITLWRKMGTQLKFSTSSHPQTDG 11
           VKFLSHFW  LW K+GT+L +ST+ HPQTDG
Sbjct: 304 VKFLSHFWKVLWGKLGTKLLYSTTCHPQTDG 334


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
 gb|AAK92640.1|AC079634_1 Putative retroelement [Oryza sativa Japonica Group]
 gb|AAP53161.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1708

 Score =  353 bits (906), Expect = e-108
 Identities = 165/275 (60%), Positives = 211/275 (76%), Gaps = 5/275 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL  RHAKWVE++++F + IKHK GK N  ADALSR+YA+L+ L  K+ GLE +K+ Y+ 
Sbjct: 1121 KLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAH 1180

Query: 631  DPDFGELFRSCQNHAT-GKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
            D DF ++  +C+   T  K+ L+NGF+FR  ++CIP  S+R++L++E H GGL    G+ 
Sbjct: 1181 DDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVK 1240

Query: 466  KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
            KT  +L +HFFWPKM RDVE FV RC  C +AK    PHGLYMPLPVP  PWED+S+DF+
Sbjct: 1241 KTEDILADHFFWPKMRRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSVPWEDISMDFV 1300

Query: 286  IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
            +GLPRT++ +DSI VVVDRFSKMAHFI CH + DA  VA+L+F+EIVRLHG+P T+VSDR
Sbjct: 1301 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 1360

Query: 106  DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            D KFLSHFW TLW K+GT+L FST+ HPQTDGQTE
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTE 1395


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
 gb|ABE60890.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1616

 Score =  352 bits (904), Expect = e-108
 Identities = 164/275 (59%), Positives = 209/275 (76%), Gaps = 5/275 (1%)
 Frame = -3

Query: 811  KLRPRHAKWVEYLQAFTFTIKHKSGKLNKGADALSRKYALLNSLQPKVIGLELLKQDYSS 632
            KL  RHAKWVE++++F + IKHK GK N  ADALSR+YA+L+ L  K+ GLE +K+ Y+ 
Sbjct: 1121 KLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAH 1180

Query: 631  DPDFGELFRSCQNHAT-GKYHLSNGFLFRGQRICIPRHSIRVMLIKENHEGGL----GID 467
            D DF  +  +C+   T  K+ L+NGF+FR  ++CIP  S+R++L++E H GGL    G+ 
Sbjct: 1181 DDDFKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVK 1240

Query: 466  KTLAMLQNHFFWPKMVRDVEHFVRRCLPCHRAKGHSFPHGLYMPLPVPVAPWEDVSLDFI 287
            KT  +L +HFFWPKM RDVE FV RC  C +AK    PHGLYMPLPVP  PWED+S+DF+
Sbjct: 1241 KTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFV 1300

Query: 286  IGLPRTQRQKDSIMVVVDRFSKMAHFIACHTTYDAVQVANLYFKEIVRLHGIPKTMVSDR 107
            +GLPRT++ +DSI VVVDRFSKMAHFI CH + DA  VA+L+F+EIVRLHG+P T+VSDR
Sbjct: 1301 LGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDR 1360

Query: 106  DVKFLSHFWITLWRKMGTQLKFSTSSHPQTDGQTE 2
            D KFLSHFW TLW K+GT+  FST+ HPQTDGQTE
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQTE 1395


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