BLASTX nr result

ID: Chrysanthemum22_contig00049282 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00049282
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88664.1| hypothetical protein Ccrd_026149 [Cynara carduncu...    82   1e-15
ref|XP_023732103.1| uncharacterized protein LOC111879612 [Lactuc...    61   3e-08

>gb|KVH88664.1| hypothetical protein Ccrd_026149 [Cynara cardunculus var. scolymus]
          Length = 378

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 49/82 (59%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
 Frame = -3

Query: 386 CLTPYAKSKSKEFEVMEYRSCMENSSYNNTTTRCHEIGFGSQGRXXXXXXXXXXXXXSGM 207
           CLTPYAKSKSKEFE +EY    ENSSYN+  TR H+IGF   GR             SG 
Sbjct: 305 CLTPYAKSKSKEFEAIEYH---ENSSYND--TRFHDIGF---GRKLSKSSTNHHHVNSGK 356

Query: 206 IFGR---RSDENKYTYGKHMHY 150
           I GR   RSDENKYTYGK+MHY
Sbjct: 357 ILGRAGCRSDENKYTYGKYMHY 378


>ref|XP_023732103.1| uncharacterized protein LOC111879612 [Lactuca sativa]
 gb|PLY99917.1| hypothetical protein LSAT_7X14120 [Lactuca sativa]
          Length = 379

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = -3

Query: 386 CLTPYAKSKSKEFEVMEYRSCMENSSYNNTTTRCHEIGFGSQGRXXXXXXXXXXXXXSG- 210
           CLTPY+K+KSKEFE          ++  N   R  E+GFGS G              SG 
Sbjct: 308 CLTPYSKTKSKEFE----------TTIENHARRFPELGFGSHGGKLSKSSNQEYVVNSGN 357

Query: 209 --MIFGRRSDENKYTYGKHMH 153
              I GRRSDENKY+YGKH++
Sbjct: 358 SRKILGRRSDENKYSYGKHIY 378


Top