BLASTX nr result
ID: Chrysanthemum22_contig00048374
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00048374
(844 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009352236.1| L protein [Tomato yellow mottle-associated v... 216 4e-60
ref|YP_009301361.1| RNA-dependent RNA polymerase [Wuhan Insect v... 171 3e-44
ref|YP_009177021.1| polymerase protein [Alfalfa dwarf virus] >gi... 151 1e-37
ref|YP_006576506.2| RNA-dependent RNA polymerase [Persimmon viru... 132 8e-31
ref|YP_009300875.1| RNA-dependent RNA polymerase [Wuhan Insect v... 115 6e-25
gb|ATS17313.1| RNA-dependent RNA polymerase [Cabbage cytorhabdov... 100 4e-20
ref|YP_425092.1| RNA-dependent RNA polymerase [Lettuce necrotic ... 99 1e-19
ref|YP_002308376.1| L protein [Lettuce yellow mottle virus] >gi|... 97 9e-19
ref|YP_009300689.1| RNA-dependent RNA polymerase [Wuhan Insect v... 88 1e-15
gb|AIU41029.1| RNA-dependent RNA polymerase, partial [Persimmon ... 60 9e-07
>ref|YP_009352236.1| L protein [Tomato yellow mottle-associated virus]
gb|AQY17505.1| L protein [Tomato yellow mottle-associated virus]
Length = 2085
Score = 216 bits (551), Expect = 4e-60
Identities = 111/265 (41%), Positives = 162/265 (61%)
Frame = +1
Query: 49 VFSSTLLEPDEAIPHSYVHNVAPMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVIDK 228
V SST+LEPDEAIPH+Y HNV P+ Y ID+ A +NDVR++ W DW+ +
Sbjct: 1713 VTSSTMLEPDEAIPHAYSHNVLPVPQFYGIGNIDATKAANRHNDVRNQAWSSDWAEELRS 1772
Query: 229 VSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIRCH 408
++YSDAE++NPD H R L +K+ G + + VIKDYIW+ EELSN+IG + + R
Sbjct: 1773 CDVLYSDAEVVNPDDHESRFELVKKIALSGRRPVTVIKDYIWSAEELSNKIGIMWASRAR 1832
Query: 409 RWELVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNPIDILWREILGHLSASFQGLEP 588
RWEL+T+ F+S++YPEVWW +++ + + I N + LW I L + +
Sbjct: 1833 RWELITTRFRSHNYPEVWWVLHDAVSPTSDTILYPIPNKVQCLWIGIERALKSHEYSISG 1892
Query: 589 SEAVSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRPKFIQ 768
+ + + + + +YKM + V W F +IGSLLP G +T LY Y+L+ KRP I+
Sbjct: 1893 ED--NALISSLHDRQMLYKMISRVRAWAVFDLIGSLLPKNGSYTSLYYYILKTKRPFSIK 1950
Query: 769 VHTEGSEMKLYDSDYLKLRARMFAL 843
+E S KLY SDYL+LR ++FA+
Sbjct: 1951 A-SESSSHKLYKSDYLELRGKLFAI 1974
>ref|YP_009301361.1| RNA-dependent RNA polymerase [Wuhan Insect virus 6]
gb|AJG39191.1| RNA-dependent RNA polymerase [Wuhan Insect virus 6]
Length = 2079
Score = 171 bits (432), Expect = 3e-44
Identities = 97/266 (36%), Positives = 139/266 (52%), Gaps = 1/266 (0%)
Frame = +1
Query: 49 VFSSTLLEPDEAIPHSYVHNVAPMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVIDK 228
+ STLL PD+AIP +YVHNV PM LS +D I L N++ +W W V+
Sbjct: 1709 IICSTLLTPDDAIPQTYVHNVPPM-LSDLGDDVDFKHMINLPNNILDSRWHDSWKSVVSN 1767
Query: 229 VSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIRCH 408
++ D EI+ + ER L K++ + VIKDY+++ +++ N+I I S +
Sbjct: 1768 CDMVLCDVEILGRNKAKERLILMEKILRINNWRTAVIKDYLFSPDDMCNQIRRIASSQPK 1827
Query: 409 RWELVTSHFKSYHYPEVWWRVYETSE-NSEISDSAMIGNPIDILWREILGHLSASFQGLE 585
W LVTS F+S H+PEVWW + + E IS +GN + W + L S+
Sbjct: 1828 GWSLVTSKFRSAHHPEVWWLIDRSREVTGSISVGPFVGNVLSTWW-TVRRELMESYNDDI 1886
Query: 586 PSEAVSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRPKFI 765
+ + A + +M TYV W FPVIGS+LP G FT L+ YL + KRP I
Sbjct: 1887 LTSTDMKTLAFINSGHNARRMETYVRSWLIFPVIGSMLPQKGSFTQLFYYLKKTKRPGKI 1946
Query: 766 QVHTEGSEMKLYDSDYLKLRARMFAL 843
S ++LY SD+ LR +MFAL
Sbjct: 1947 HTVRGNSNLRLYSSDFSDLRIKMFAL 1972
>ref|YP_009177021.1| polymerase protein [Alfalfa dwarf virus]
gb|AKD44217.1| polymerase protein [Alfalfa dwarf virus]
Length = 2085
Score = 151 bits (382), Expect = 1e-37
Identities = 81/266 (30%), Positives = 138/266 (51%), Gaps = 1/266 (0%)
Frame = +1
Query: 49 VFSSTLLEPDEAIPHSYVHNVAPMSLSYSAK-MIDSNSAILLNNDVRSEKWRRDWSMVID 225
V +ST+L+P+ AIPH+YVHN++P+SL + ++D+ + I N++ + W W
Sbjct: 1708 VITSTILDPERAIPHTYVHNISPISLKFDLNDVLDTKTMINKMNNIMDKGWTDSWKGTTL 1767
Query: 226 KVSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIRC 405
+ SD EI + R R+L+S+ VIKDYI+T EL+ RI I +
Sbjct: 1768 DCRALVSDIEIFRREDRAMRSRALRQLLSLKEWSFAVIKDYIYTCSELAERIQIIMTSSP 1827
Query: 406 HRWELVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNPIDILWREILGHLSASFQGLE 585
W L+T+ +S +YPE WW + + + ++ ++ +W L ++ + E
Sbjct: 1828 SSWRLITTKLRSANYPECWWVLRNSHVIEDKLGLSIETGKLNRVWNNYLEVMTQEVELDE 1887
Query: 586 PSEAVSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRPKFI 765
+E + E + M ++V W + P++G L P GG FT +YLY+ + K+P ++
Sbjct: 1888 MTEREEIELRSLHGPEVLSSMLSHVRNWLSLPIVGLLYPNGGNFTRIYLYMKKYKQPAWV 1947
Query: 766 QVHTEGSEMKLYDSDYLKLRARMFAL 843
+ S +KLYD DY +LR + L
Sbjct: 1948 KTQRVDSALKLYDKDYYRLRDILLCL 1973
>ref|YP_006576506.2| RNA-dependent RNA polymerase [Persimmon virus A]
dbj|BAM36035.2| RNA-dependent RNA polymerase [Persimmon virus A]
Length = 2089
Score = 132 bits (331), Expect = 8e-31
Identities = 79/265 (29%), Positives = 130/265 (49%)
Frame = +1
Query: 49 VFSSTLLEPDEAIPHSYVHNVAPMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVIDK 228
+ STLLE D+A+P SY H + P+++ S +D + I ND+ SE W +DW
Sbjct: 1719 ILVSTLLETDDAMPQSYPHLMQPIAVRESKTNVDRKTMINRVNDLSSESWAKDWKDAASN 1778
Query: 229 VSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIRCH 408
I+ SD EI+ +R + K++++ D +IKDYI++ EEL +R+ I S
Sbjct: 1779 CEIVVSDIEILGKRNCFQRDNVLNKILTLKDWDFAIIKDYIFSIEELYDRLRYILSKVKG 1838
Query: 409 RWELVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNPIDILWREILGHLSASFQGLEP 588
+ LV+ K+ PEVWW + +T ++S + I W + + L + P
Sbjct: 1839 KMTLVSLGSKTPGVPEVWWVIRKT-DHSRTVQLSYDPRSIKEEWNDAMYMLEDLDRDGVP 1897
Query: 589 SEAVSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRPKFIQ 768
+ + + G+ M V W P++G+ LP G FT L+ L KRP I
Sbjct: 1898 KYIMDDMNERLFINNGLDTMHNIVRYWSTLPMVGNALPKKGNFTDLFYRLSSGKRPAIIH 1957
Query: 769 VHTEGSEMKLYDSDYLKLRARMFAL 843
V E ++++Y D+ K+R +F +
Sbjct: 1958 VERENKQLRMYVKDHYKIREVLFGM 1982
>ref|YP_009300875.1| RNA-dependent RNA polymerase [Wuhan Insect virus 5]
gb|AJG39185.1| RNA-dependent RNA polymerase [Wuhan Insect virus 5]
Length = 2098
Score = 115 bits (287), Expect = 6e-25
Identities = 75/262 (28%), Positives = 129/262 (49%)
Frame = +1
Query: 58 STLLEPDEAIPHSYVHNVAPMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVIDKVSI 237
STL + A P +Y H+V P+ S K ID ++ I +ND+ SE + +W V+ ++
Sbjct: 1727 STLADTGLAAPQTYPHSVQPIVRSSPYK-IDGSTMIDKHNDILSESYTEEWRPVMASLNS 1785
Query: 238 IYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIRCHRWE 417
+ SD EII P+ +R + RKL+ + + +IKDYI++ E ++R I +
Sbjct: 1786 LLSDIEIIGPERSDDRTSAIRKLLEICDWEGFIIKDYIYSLREFTDRCSIILPKMNGDIK 1845
Query: 418 LVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNPIDILWREILGHLSASFQGLEPSEA 597
LVTS +S PEVWW + + S+ I LW + + L + +P+
Sbjct: 1846 LVTSKMRSVRAPEVWW-IGQNSKAEYTVRRCYDPRSIRELWDDCVRSLLHDTEYQDPT-V 1903
Query: 598 VSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRPKFIQVHT 777
+ + + + + + V W + V+G +LP G +T + L + KRPK +
Sbjct: 1904 LEDLTRRVLSRANLASVHSVVLEWSSLAVVGKMLPSDGSYTEAFYKLYKGKRPKIVSDDR 1963
Query: 778 EGSEMKLYDSDYLKLRARMFAL 843
+ ++ L+ SDY K+R +F L
Sbjct: 1964 DNADRILHLSDYYKMREILFGL 1985
>gb|ATS17313.1| RNA-dependent RNA polymerase [Cabbage cytorhabdovirus 1]
Length = 2071
Score = 100 bits (250), Expect = 4e-20
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 7/269 (2%)
Frame = +1
Query: 58 STLLEPDEAIPHSY--VHNVAPMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVIDK- 228
STL++ E+IP +Y +N SL +DS+S I ND+ E W + W+ +I
Sbjct: 1712 STLVDTGESIPQAYPMCNNAFKFSLDPD---VDSSSMINRVNDISHEGWVKSWANIIPPD 1768
Query: 229 VSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIRCH 408
V SD EIINP + +R + RK++++ ++++KDY+++ EL +R+ +I
Sbjct: 1769 VDFCVSDIEIINPTQNYDRNQVMRKVLALKSWKMLLLKDYVYSASELESRL-SIALQHSD 1827
Query: 409 RWELVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNPIDILWREILGHLSASFQGL-E 585
+++ S + PE WW + + ++ ++ + +W + HL+ S + E
Sbjct: 1828 DVKMLFSGARQRVVPEFWWVIKKMKQDPLKAEIGYHKRVMQEIWSDFEHHLNYSDPLIPE 1887
Query: 586 PSEAVSEACAD---MTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRP 756
++ D + I G K+ W P+ GS LP G +T + YL R K+P
Sbjct: 1888 ILTNINHILMDEGRLAAITGRIKL------WATLPIAGSALPHKGSYTRFFGYLQRGKKP 1941
Query: 757 KFIQVHTEGSEMKLYDSDYLKLRARMFAL 843
I+ + KLY SDY +LR + L
Sbjct: 1942 ADIRWEKDDLGRKLYMSDYDQLREILLGL 1970
>ref|YP_425092.1| RNA-dependent RNA polymerase [Lettuce necrotic yellows virus]
sp|Q4W382.1|L_LNYV3 RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=GDP
polyribonucleotidyltransferase; Includes: RecName:
Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 2
emb|CAG34091.1| putative polymerase [Lettuce necrotic yellows virus]
emb|CAI30426.1| RNA-dependent RNA polymerase [Lettuce necrotic yellows virus]
Length = 2068
Score = 99.4 bits (246), Expect = 1e-19
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Frame = +1
Query: 49 VFSSTLLEPDEAIPHSYVHNVAPMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVID- 225
+ +STLL+ +AIP Y N S SY+ + S+ + NDV W DW V
Sbjct: 1708 IITSTLLDTGDAIPQVYP-NCDKGSSSYARGTVISDLMVTRVNDVNHLLWGEDWKPVFQS 1766
Query: 226 -KVSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIR 402
+ + SD EI RQT+ + ++++KDYI+ E+ NR+ + +
Sbjct: 1767 YETDLCISDIEINGELNGESRQTMIATVTMAHDWKMVIMKDYIYNMREMENRLSILLPV- 1825
Query: 403 CHRWELVTSHFKSYHYPEVWWRVYETSENSEISDSAMIG---NPIDILWREILGHLSASF 573
EL+T + + PEVWW + + S ++G + I +W + ++ +
Sbjct: 1826 FKSLELITCNSRQRVMPEVWWIM-----KARRSSGKLLGYHRSVIRQIWDGVKEGINTAD 1880
Query: 574 QGLEPSEAVSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKR 753
+E SE + + M + + + P++GS+LP G +T L YL R K+
Sbjct: 1881 WAME--SVFSEINRTIASTADMIAMTIRLKAFFSLPIVGSVLPYKGSYTRLLGYLQRGKK 1938
Query: 754 PKFIQVHTEGSEMKLYDSDYLKLRARMFAL 843
P+ I + T +LY SDY K+R+ +F L
Sbjct: 1939 PEDISLITSDDGKRLYLSDYEKVRSVLFGL 1968
>ref|YP_002308376.1| L protein [Lettuce yellow mottle virus]
gb|ABV56129.1| L protein [Lettuce yellow mottle virus]
Length = 2068
Score = 97.1 bits (240), Expect = 9e-19
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Frame = +1
Query: 49 VFSSTLLEPDEAIPHSYVHNVAPMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVIDK 228
+ STLL+ AIP Y H + + + +A +I S+ + NDV ++W DW+ V
Sbjct: 1707 IIISTLLDTGSAIPQVYPHCDSALKNTGAASII-SHLMVDRANDVLHDRWETDWNPVFTS 1765
Query: 229 --VSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIR 402
+ ++ SD EI + R + K+I ++KDYI+++ EL NR+ I +
Sbjct: 1766 YNIQVLISDIEITGEEIET-RSAVLSKMIHAHEWKFAILKDYIYSRSELENRLSIILGLY 1824
Query: 403 CHRWELVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNPIDILWREILGHLSASFQGL 582
+ E++T + + PEVWW + + ++S + I W +++ L
Sbjct: 1825 A-KVEIITCNTRQRTMPEVWW-ILKDRKSSSFKRLGYHRSVIRQQWECFKNNINQRDWAL 1882
Query: 583 EPSEAVSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRPKF 762
E ++E + + + M + P++G + P G +T L YL R K+P
Sbjct: 1883 --GEVLTELNHRLASDDKLISMMVRTKSAFSLPIVGCVFPHKGNYTRLLGYLQRGKKPID 1940
Query: 763 IQVHTEGSEMKLYDSDYLKLRARMFAL 843
I + + S +LY SD+ K+R +F +
Sbjct: 1941 ISIISTQSNKRLYSSDFEKIRWVLFGI 1967
>ref|YP_009300689.1| RNA-dependent RNA polymerase [Wuhan Insect virus 4]
gb|AJG39179.1| RNA-dependent RNA polymerase [Wuhan Insect virus 4]
Length = 2105
Score = 87.8 bits (216), Expect = 1e-15
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 8/266 (3%)
Frame = +1
Query: 49 VFSSTLLEPDEAIPHSYVHNVA-PMSLSYSAKMIDSNSAILLNNDVRSEKWRRDWSMVID 225
++ STL+ + +P + H M+LS ID S + N++ ++W DW +
Sbjct: 1741 IYVSTLISSESVMPQTMPHLFDHTMNLSN----IDKTSMVNKVNNILDDRWGEDWEPIAS 1796
Query: 226 KVSIIYSDAEIINPDAHLERQTLFRKLISVGPKDLIVIKDYIWTKEELSNRIGTIQSIRC 405
I+ SD E+I + + +R+ +FRKL+SV + IKDY++ ELS R+ I
Sbjct: 1797 VCGILISDIELIGENRYQDRELMFRKLLSVTSWKIACIKDYVYNYRELSRRVDIIVR-GS 1855
Query: 406 HRWELVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNP--IDILWREILGHLSASFQG 579
+EL+TS + PEVWW + +NS + D N ++ + + S + G
Sbjct: 1856 VSFELLTSVHRQRKLPEVWWVI----KNSTLIDMGFDDNETCLNFVPEIMTSFWSNTMSG 1911
Query: 580 LEPSEAVSEACA----DMTPIEGIY-KMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLR 744
L A+ D + +Y M +C P +G L+P FT + L
Sbjct: 1912 LCKRNAIEWPLTLEIDDHLLNKSMYDSMIQRARIYCTVPTVGCLIPHQNNFTRVLGKLQS 1971
Query: 745 AKRPKFIQVHTEGSEMKLYDSDYLKL 822
RP + +KLY S+ +KL
Sbjct: 1972 GFRPAKVSFSRWERSVKLYKSNEIKL 1997
>gb|AIU41029.1| RNA-dependent RNA polymerase, partial [Persimmon virus A]
Length = 251
Score = 59.7 bits (143), Expect = 9e-07
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Frame = +1
Query: 418 LVTSHFKSYHYPEVWWRVYETSENSEISDSAMIGNPIDIL--WREILGHLSASFQGLEPS 591
LV+ K+ PEVWW + +T + S +P I W + + L + P
Sbjct: 4 LVSLGSKTPGVPEVWWVIRKTDHGRNVQLSY---DPRSIKEEWNDAIYMLEDLDRDGVPK 60
Query: 592 EAVSEACADMTPIEGIYKMRTYVDGWCNFPVIGSLLPVGGLFTPLYLYLLRAKRPKFIQV 771
+ + + G+ M V W P++G+ LP G FT L+ L KRP I V
Sbjct: 61 YIMDDMNERLFINNGLDTMHNIVRYWSTLPMVGNALPKKGNFTDLFYRLSSGKRPAIIHV 120
Query: 772 HTEGSEMKLYDSDYLKLRARMFAL 843
E ++++Y D+ K+R +F +
Sbjct: 121 ERENKQLRMYVKDHYKIREVLFGM 144