BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00048319
         (1508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009352242.1| N protein [Tomato yellow mottle-associated v...   372   e-121
ref|YP_009301356.1| nucleocapsid [Wuhan Insect virus 6] >gi|7524...   266   6e-80
ref|YP_009177015.2| nucleocapsid [Alfalfa dwarf virus] >gi|13566...   250   1e-73
emb|CAG34086.1| nucleocapsid protein [Lettuce necrotic yellows v...   235   4e-68
gb|AJS10615.1| nucleocapsid protein [Lettuce necrotic yellows vi...   234   6e-68
gb|AJS10607.1| nucleocapsid protein [Lettuce necrotic yellows vi...   234   6e-68
emb|CAG34090.1| nucleocapsid protein [Lettuce necrotic yellows v...   234   6e-68
emb|CAG34089.1| nucleocapsid protein [Lettuce necrotic yellows v...   234   6e-68
emb|CAG34088.1| nucleocapsid protein [Lettuce necrotic yellows v...   234   6e-68
emb|CAG34082.1| nucleocapsid protein [Lettuce necrotic yellows v...   234   6e-68
gb|AJS10611.1| nucleocapsid protein [Lettuce necrotic yellows vi...   233   2e-67
gb|AJS10619.1| nucleocapsid protein [Lettuce necrotic yellows vi...   233   2e-67
gb|AJS10617.1| nucleocapsid protein [Lettuce necrotic yellows vi...   233   2e-67
gb|AJS10609.1| nucleocapsid protein [Lettuce necrotic yellows vi...   233   3e-67
gb|AJS10608.1| nucleocapsid protein [Lettuce necrotic yellows vi...   233   3e-67
ref|YP_425087.1| nucleocapsid protein [Lettuce necrotic yellows ...   232   4e-67
emb|CAG34087.1| nucleocapsid protein [Lettuce necrotic yellows v...   232   4e-67
emb|CAG34083.1| nucleocapsid protein [Lettuce necrotic yellows v...   232   4e-67
gb|AJS10614.1| nucleocapsid protein [Lettuce necrotic yellows vi...   231   9e-67
ref|YP_009300870.1| nucleocapsid [Wuhan Insect virus 5] >gi|7524...   230   3e-66

>ref|YP_009352242.1| N protein [Tomato yellow mottle-associated virus]
 gb|AQY17511.1| N protein [Tomato yellow mottle-associated virus]
          Length = 412

 Score =  372 bits (954), Expect = e-121
 Identities = 188/416 (45%), Positives = 267/416 (64%)
 Frame = -3

Query: 1365 MSSLHASMENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVE 1186
            M++L   + NTDYDDL  ++V  G +   W+D+DV  I  Y +  +DS + V+ G YV E
Sbjct: 1    MNTLALQLSNTDYDDLASITVAPGGSNVAWNDEDVLSIRRYSLAVMDSPTMVLHGGYVFE 60

Query: 1185 CLNNEDCIDSDLINIILHLAVSLRNPDNEKEHLLKRPTHYSEKNSKYLIPYAMPNIQEAE 1006
             LNN   +D++++   +HLA +LR+PDN  + LL  P H    +   +I   +P I+  +
Sbjct: 61   SLNNNARVDTNVLMSTVHLAANLRDPDNITQCLLTTPPH----SRPAIIQTTLPTIRAIQ 116

Query: 1005 NTVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFL 826
              +          L  ++NI                       G I+ +AAAY+++CAFL
Sbjct: 117  EDITEEERNTLALLNVDVNIENQDNGNQNQQGENVQVDQ----GSIDMKAAAYAYVCAFL 172

Query: 825  MRLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTW 646
            MRLQ R A+ V G +  A  RF +WY     +  +   ++ A  ++KE +SRKPE+T TW
Sbjct: 173  MRLQCRSAQNVSGGLRRAIDRFKTWYDGSTDIFDEISFSIDALNQLKEAISRKPEITSTW 232

Query: 645  VMWLATTENESMLLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            V++LATTENE  LL   +G+IEYLGLQVF+YQGMHALTQVLA+HQ+ K+PL+DL+ ELD 
Sbjct: 233  VLYLATTENEKTLLKQSKGMIEYLGLQVFSYQGMHALTQVLALHQMSKVPLRDLMMELDS 292

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P+TRDGL+EIS IL+++E+T  +  RKTYFRYSR+WD KYF+ +QSK CVPLLYVAA  V
Sbjct: 293  PLTRDGLREISNILKNHERTNRAPERKTYFRYSRVWDTKYFAQLQSKTCVPLLYVAAVAV 352

Query: 285  KSIATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIWDSA 118
            + I+ N  SDP +IYALQ++G  MK +L+RVAA+L   +++ +  D KSG +WD+A
Sbjct: 353  RDISANTTSDPTQIYALQNIGSAMKASLDRVAAALTSYLVDKSYRDAKSGSVWDAA 408


>ref|YP_009301356.1| nucleocapsid [Wuhan Insect virus 6]
 gb|AJG39186.1| nucleocapsid [Wuhan Insect virus 6]
          Length = 455

 Score =  266 bits (679), Expect = 6e-80
 Identities = 152/410 (37%), Positives = 230/410 (56%), Gaps = 6/410 (1%)
 Frame = -3

Query: 1338 NTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDCID 1159
            N+ Y +L          +  WDD  +K + +Y + +L     +  GK + + LNN D ++
Sbjct: 52   NSRYAELGSTVPSSKHKIKIWDDSHIKDLKVYGLIQLTEDKIITYGKALRDYLNNGD-VN 110

Query: 1158 SDLINIILHLAVSLRNPDNEKEHLLKRPTHYSEKNSKYLIPYAMPNI----QEAENTV-D 994
            ++ +NI+L+LAVSL++ +N ++HLL  P     K      P+ M +I    Q  E T+ +
Sbjct: 111  ANTVNIMLYLAVSLKSMENIQKHLLISPNAILTK------PFEMSDIVLEDQRVEETISE 164

Query: 993  XXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLMRLQ 814
                     L +                            P E QAAAY+F+ A+L+RL 
Sbjct: 165  TENLSFREKLKRRKEASKAVREDVEATAGISQAPADAENDPKEYQAAAYAFIAAYLLRLS 224

Query: 813  ARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWVMWL 634
             R A+  +  M T K RF S+Y      L  F +     EK++ I+SRK E  GTWV+WL
Sbjct: 225  TRQAKPTLEKMGTMKERFTSFYDKGHATLDTFNIQSETMEKLRGIISRKKEAVGTWVLWL 284

Query: 633  ATTENE-SMLLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDCPMT 457
            +  EN  S L +N  G++EY+GLQ++AY GMHA+TQ LA+ Q+ K+PL  LL +L C +T
Sbjct: 285  SYNENSNSELTSNELGMLEYVGLQIYAYMGMHAVTQTLALRQVSKLPLDVLLTQLCCQLT 344

Query: 456  RDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTVKSI 277
            R  + EI  I+++YE T     R TYFRY+R WD  YF  +QSK C  L+Y+AA+TVK +
Sbjct: 345  RVAVDEIYNIVKNYEITDRHPNRTTYFRYARAWDSGYFGKVQSKECPQLVYLAAKTVKEL 404

Query: 276  ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            + NL+SDP +IYA+ S+G+++ E L +V+ +LV  I++S   D+ +G IW
Sbjct: 405  SPNLKSDPTQIYAVLSIGESIMEKLNKVSDNLVSYIMDSMAEDEDAGDIW 454


>ref|YP_009177015.2| nucleocapsid [Alfalfa dwarf virus]
 gb|AKD44211.2| nucleocapsid [Alfalfa dwarf virus]
          Length = 482

 Score =  250 bits (639), Expect = 1e-73
 Identities = 145/438 (33%), Positives = 232/438 (52%), Gaps = 15/438 (3%)
 Frame = -3

Query: 1383 SNATATMSSLHASMENTD-YDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVV 1207
            SN   T+        N+  Y D++ V          W +    KI +Y+V +L+    V+
Sbjct: 45   SNTVKTIPIASGPTANSKKYTDIDSVRTGDSKTTLTWRNDSFSKIKVYEVTQLNDDDCVL 104

Query: 1206 AGKYVVECLNNEDCIDSDLINIILHLAVSLRNP-DNEKEHLLKRPTHYSEKN-------S 1051
             G+ V + +N  + I SD++ ++L+LA+S+R+  D  + +LL  PT  ++         S
Sbjct: 105  YGRAVFDAINTGN-ITSDVVFMMLYLAISIRSTGDKSENYLLAAPTGMTDLMGLVRPTVS 163

Query: 1050 KYLIPYAMPNIQEAENTVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGP 871
               +  A  ++ + +N  +          GK+                            
Sbjct: 164  DQAMATAGGSVADVDNIFEADKQPRKRGKGKSTKTGKVGDELVNNIEGVRNNHREADAEL 223

Query: 870  IEK----QAAAYSFMCAFLMRLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVA 703
            + +    QAAA+S+  AFL+RLQ +  +  V +   A  R+  +Y    + L    LT+ 
Sbjct: 224  VGENKTYQAAAFSYAAAFLLRLQCKREDNTVPAFEKAVTRYNGFYDSGGETLHGLALTLE 283

Query: 702  AAEKVKEILSRKPEVTGTWVMWLATTENESM--LLANGRGLIEYLGLQVFAYQGMHALTQ 529
            +   ++E++ RKPE+ GTWV W+A  ENE    +L    GL+EYL +QVFA+QGMH +TQ
Sbjct: 284  SCRALREVIGRKPELIGTWVAWVAYNENERKAGMLKQDAGLLEYLAIQVFAFQGMHVVTQ 343

Query: 528  VLAIHQLGKMPLKDLLKELDCPMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKK 349
             LAIHQL  +PL  LL+E+DC MTR  ++E+  I+++++ TT    RKTYFRY+R+W++ 
Sbjct: 344  TLAIHQLSAVPLGKLLREMDCQMTRRAVEEVYGIIKNHQATTAHPERKTYFRYARVWNEG 403

Query: 348  YFSPIQSKVCVPLLYVAARTVKSIATNLRSDPMKIYALQSVGDTMKETLERVAASLVQII 169
            YFS +QSK C  LLY+A++ VK +  +  SDP +IYAL+ +G+  K  L++VA  L+  I
Sbjct: 404  YFSAVQSKSCTHLLYLASKVVKQLNPSAGSDPTQIYALKDMGEDQKARLDKVANKLLDFI 463

Query: 168  IESTVVDQKSGRIWDSAV 115
               T  D ++G IW   V
Sbjct: 464  WTQTANDPEAGSIWKDIV 481


>emb|CAG34086.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  235 bits (599), Expect = 4e-68
 Identities = 146/442 (33%), Positives = 222/442 (50%), Gaps = 11/442 (2%)
 Frame = -3

Query: 1419 ELQSHWSTITQYSNATATMSSLHAS---MENTDYDDLEGVSVIQGSAVGKWDDQDVKKIS 1249
            +L+   S + Q     A+   +      + NT YD L GV++ +  A  KW D D+K I 
Sbjct: 13   QLRKERSAVIQKPTVQASSEQVKTEKPRVRNTAYDSLAGVTIGK-RASRKWSDADIKSIP 71

Query: 1248 IYDVKKLDSASAVVAGKYVVECLNNEDCIDSDLINIILHLAVSLRNPDNEK-EHLLKRPT 1072
            IYDV ++ +A  +  GK ++  + N   +++  ++  L LAVS+  P     EHLL  P+
Sbjct: 72   IYDVHQVPAAQVIALGKDLLTQIQNNS-VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPS 130

Query: 1071 HYSEKNSKYLIPYAMPNIQEA-----ENTVDXXXXXXXXXLGKNINIXXXXXXXXXXXXX 907
                    +  P A  + +       + T+D           +                 
Sbjct: 131  SDQGTRLDFTQPQAGVSNRSGLTAIEKRTLDATRKNLLTETDEEKRARYEAIIKKMEDQE 190

Query: 906  XXXXXXXXXKGPIEKQAAAYSFMCAFLMRLQARMAEGVVGSMATAKARFASWYGDKKKVL 727
                         E +AAAY F+ A L++L A+  E  +  +A  + RFA+WY   K VL
Sbjct: 191  AGLGTSRTTVVTSETEAAAYGFLAATLLKLYAKSTESYIAGLAQIRNRFAAWYDCPKAVL 250

Query: 726  ADFELTVAAAEKVKEILSRKPEVTGTWVMWLATTENESM-LLANGRGLIEYLGLQVFAYQ 550
              F+ T AA   ++   +R+PEV  TW +W+A  EN +  LL   +GL+ YL  Q FAY 
Sbjct: 251  DAFQPTEAALVSLRAAFARRPEVLSTWTLWVAVNENRTPGLLVTQQGLLNYLACQQFAYP 310

Query: 549  GMHALTQVLAIHQLGKMPLKDLLKELDCPMTRDGLKEISRILRDYEQTTTSGPRKTYFRY 370
            GMHA T ++ IH+   M   DLL E+DCP TR G++E   ++RDYE T     R TYFRY
Sbjct: 311  GMHAYTLLIEIHEHTGMKFSDLLVEMDCPATRAGVREALELIRDYEITKDHPKRTTYFRY 370

Query: 369  SRIWDKKYFSPIQSKVCVPLLYVAARTVKSI-ATNLRSDPMKIYALQSVGDTMKETLERV 193
            +R WD KYF  +QS  C  L+YVAA   K + A     DPM+I+A++++  T+K  L+ V
Sbjct: 371  ARNWDPKYFGALQSTECKTLVYVAASVSKKVSAQGANGDPMEIFAIKNLDATIKARLDPV 430

Query: 192  AASLVQIIIESTVVDQKSGRIW 127
            A ++   I++  ++D+ SG  W
Sbjct: 431  AENMAGKILDQMLMDEMSGASW 452


>gb|AJS10615.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  234 bits (598), Expect = 6e-68
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>gb|AJS10607.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  234 bits (598), Expect = 6e-68
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>emb|CAG34090.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  234 bits (598), Expect = 6e-68
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLAETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLMEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>emb|CAG34089.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  234 bits (598), Expect = 6e-68
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   IRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>emb|CAG34088.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  234 bits (598), Expect = 6e-68
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>emb|CAG34082.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 emb|CAG34084.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 emb|CAG34085.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 gb|AJS10610.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 gb|AJS10616.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  234 bits (598), Expect = 6e-68
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>gb|AJS10611.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  233 bits (595), Expect = 2e-67
 Identities = 142/414 (34%), Positives = 212/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNSA 99

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
             ++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 100  -NTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>gb|AJS10619.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 gb|AJS10620.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  233 bits (594), Expect = 2e-67
 Identities = 142/419 (33%), Positives = 215/419 (51%), Gaps = 8/419 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSPEQGARLDFTQPQAGVSNRSGLTAIEKM 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T++           +                              E +AAAY F+ A L+
Sbjct: 159  TLNATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSKATVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIWDSAVT 112
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W +  T
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASWATKAT 457


>gb|AJS10617.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 gb|AJS10621.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  233 bits (594), Expect = 2e-67
 Identities = 142/419 (33%), Positives = 215/419 (51%), Gaps = 8/419 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSPEQGTRLDFTQPQAGVSNRSGLTAIEKM 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T++           +                              E +AAAY F+ A L+
Sbjct: 159  TLNATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSKATVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIWDSAVT 112
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W +  T
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASWATKAT 457


>gb|AJS10609.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  233 bits (593), Expect = 3e-67
 Identities = 141/414 (34%), Positives = 212/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +   + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLXQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>gb|AJS10608.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  233 bits (593), Expect = 3e-67
 Identities = 141/414 (34%), Positives = 212/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +   + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLXQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>ref|YP_425087.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 sp|Q86134.1|NCAP_LNYV3 RecName: Full=Nucleoprotein; Short=NP; AltName: Full=Nucleocapsid
            protein; Short=Protein N
 gb|AAA47287.1| nucleocapsid protein [Lettuce necrotic yellows virus]
 emb|CAI30421.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  232 bits (592), Expect = 4e-67
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSPEQGTRLDFTQPQAGVSNRSGLTAIEKM 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T++           +                              E +AAAY F+ A L+
Sbjct: 159  TLNATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSKATVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  V  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYVAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>emb|CAG34087.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  232 bits (592), Expect = 4e-67
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSPEQGTRLDFTQPQAGVSNRSGLTAIEKM 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T++           +                              E +AAAY F+ A L+
Sbjct: 159  TLNATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSKATVVTSETEAAAYGFLAASLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  V  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYVAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>emb|CAG34083.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  232 bits (592), Expect = 4e-67
 Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     EHLL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSTEQGTRLDFTQPQAGVSNRSGLTAIEKM 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T++           +                              E +AAAY F+ A L+
Sbjct: 159  TLNATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSKATVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  V  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYVAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>gb|AJS10614.1| nucleocapsid protein [Lettuce necrotic yellows virus]
          Length = 459

 Score =  231 bits (590), Expect = 9e-67
 Identities = 141/414 (34%), Positives = 212/414 (51%), Gaps = 8/414 (1%)
 Frame = -3

Query: 1344 MENTDYDDLEGVSVIQGSAVGKWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDC 1165
            + NT YD L GV++ +  A  KW D D+K I IYDV ++ +A  +  GK ++  + N   
Sbjct: 41   VRNTAYDSLAGVTIGK-RASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNS- 98

Query: 1164 IDSDLINIILHLAVSLRNPDNEK-EHLLKRPTHYSEKNSKYLIPYAMPNIQEA-----EN 1003
            +++  ++  L LAVS+  P     E LL  P+        +  P A  + +       + 
Sbjct: 99   VNTVTVDYCLVLAVSIPKPAMTSFERLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKR 158

Query: 1002 TVDXXXXXXXXXLGKNINIXXXXXXXXXXXXXXXXXXXXXXKGPIEKQAAAYSFMCAFLM 823
            T+D           +                              E +AAAY F+ A L+
Sbjct: 159  TLDATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLL 218

Query: 822  RLQARMAEGVVGSMATAKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWV 643
            +L A+  E  +  +A  + RFA+WY   K VL  F+ T AA   ++   +R+PEV  TW 
Sbjct: 219  KLYAKSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWT 278

Query: 642  MWLATTENESM-LLANGRGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDC 466
            +W+A  EN +  LL   +GL+ YL  Q FAY GMHA T ++ IH+   M   DLL E+DC
Sbjct: 279  LWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDC 338

Query: 465  PMTRDGLKEISRILRDYEQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTV 286
            P TR G++E   ++RDYE T     R TYFRY+R WD KYF  +QS  C  L+YVAA   
Sbjct: 339  PATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVS 398

Query: 285  KSI-ATNLRSDPMKIYALQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            K + A     DPM+I+A++++  T+K  L+ VA ++   I++  ++D+ SG  W
Sbjct: 399  KKVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASW 452


>ref|YP_009300870.1| nucleocapsid [Wuhan Insect virus 5]
 gb|AJG39180.1| nucleocapsid [Wuhan Insect virus 5]
          Length = 452

 Score =  230 bits (586), Expect = 3e-66
 Identities = 131/397 (32%), Positives = 209/397 (52%), Gaps = 12/397 (3%)
 Frame = -3

Query: 1281 KWDDQDVKKISIYDVKKLDSASAVVAGKYVVECLNNEDCIDSDLINIILHLAVSLRNPDN 1102
            +W D +++K+S YD+  LD+A AV+ G+ ++  L  +     DLI+I+L LAVS+R+P +
Sbjct: 62   EWKDSELEKVSTYDIDVLDAAEAVLMGQAMIRMLAGKTA-SRDLIDIVLFLAVSMRDPSD 120

Query: 1101 EKEHLLKRPTH-YSEKNSKYLIPYAMPNIQEAENT--VDXXXXXXXXXLGKNINIXXXXX 931
              +HLL +P   Y  + +      + P +Q    T               KN+++     
Sbjct: 121  LDKHLLTKPAKGYGTQKA-----ISKPTVQGKSPTQATSSGASTSAPEPDKNLSVAERLA 175

Query: 930  XXXXXXXXXXXXXXXXXKG--------PIEKQAAAYSFMCAFLMRLQARMAEGVVGSMAT 775
                              G          E+QAA YSF+ AF++RL +R  +    S+ +
Sbjct: 176  AKKAQSKASEIVTSASISGVPQQDGSCSAEEQAAIYSFIAAFMLRLHSRQTDSFSASLES 235

Query: 774  AKARFASWYGDKKKVLADFELTVAAAEKVKEILSRKPEVTGTWVMWLATTENESMLLANG 595
             + R   WY     +L    L        K +L R+ EV  TWVMW+A  EN + L  N 
Sbjct: 236  MQTRCGGWYEKADTILKQLNLETEILNSFKVMLGRREEVMSTWVMWVAYNENSNTLSKNN 295

Query: 594  RGLIEYLGLQVFAYQGMHALTQVLAIHQLGKMPLKDLLKELDCPMTRDGLKEISRILRDY 415
             GL+ Y+  Q++ Y G+HA+ Q+LAI Q+ K+P+  LL EL+   TR  L+ + ++L+++
Sbjct: 296  MGLMSYIAGQIYQYTGLHAVVQILAIQQVTKVPMDQLLGELNHRSTRQPLQALYKMLQEH 355

Query: 414  EQTTTSGPRKTYFRYSRIWDKKYFSPIQSKVCVPLLYVAARTVKSIA-TNLRSDPMKIYA 238
            E       R TYFRY+R+WD  YF  +QSKVC  L+Y+AA+ +K ++ T  RSDP KI+A
Sbjct: 356  ELVKEKPGRTTYFRYARVWDSGYFHDLQSKVCPDLVYLAAKILKEVSPTGARSDPTKIFA 415

Query: 237  LQSVGDTMKETLERVAASLVQIIIESTVVDQKSGRIW 127
            ++ +G+  KE L+ VA  + Q ++ +     +SG  W
Sbjct: 416  VKDLGEVKKEFLDGVANGISQWLVAADDNSSESGAFW 452