BLASTX nr result

ID: Chrysanthemum22_contig00048074 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00048074
         (516 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI12543.1| Nucleotide-binding, alpha-beta plait [Cynara card...    57   2e-06

>gb|KVI12543.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 370

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
 Frame = +3

Query: 171 LYVKHFSDAATIQEIMDAFGKYGKIVGI------RMKPEDGSCLVNYARPEEAYAAMQAL 332
           LYV+      T Q+I   FGK+G I+ +      +   E   C V YA+ EEA  A++AL
Sbjct: 85  LYVRGVPREVTEQDIRSIFGKHGNIIEVVLFKELKSLHEQECCFVKYAKIEEATQAIRAL 144

Query: 333 HRVHTLPGGQHPIRV 377
           H  HT PGG  PI V
Sbjct: 145 HNHHTFPGGMRPIEV 159