BLASTX nr result

ID: Chrysanthemum22_contig00048013 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00048013
         (775 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97007.1| hypothetical protein Ccrd_000899 [Cynara carduncu...   192   1e-56
ref|XP_023768925.1| uncharacterized protein LOC111917468 [Lactuc...   122   1e-30
ref|XP_022018180.1| transcription factor IIIB 60 kDa subunit-lik...    62   4e-07
ref|XP_023756982.1| transcription factor IIIB 60 kDa subunit-lik...    59   2e-06

>gb|KVH97007.1| hypothetical protein Ccrd_000899 [Cynara cardunculus var. scolymus]
          Length = 317

 Score =  192 bits (489), Expect = 1e-56
 Identities = 115/270 (42%), Positives = 141/270 (52%), Gaps = 61/270 (22%)
 Frame = +1

Query: 118 NSGRAVAWCSHCGKDCDTYHDHTINITSCVDCGKVLSE---------------------- 231
           NSGR + WCSHCGK+C+T  D+T N TSCVDCGKVL E                      
Sbjct: 52  NSGREMTWCSHCGKNCETSRDYTTNNTSCVDCGKVLFEDIFTEEATFVTDAAGGAHLTGN 111

Query: 232 -----GAYFESPRRPFQKGNVANFEISYKK--AKVSHTSRLNKVFERGDTLWCTHCVRKG 390
                GA FES RR  +KGNVA  ++ YK    KVSH +R  K  E   T+WC HC RKG
Sbjct: 112 FVRFGGACFESQRRTLRKGNVATNKLIYKNRITKVSHATRHYKGRE---TIWCPHCARKG 168

Query: 391 GTVHEHTTASICCVDCGKILLKDVYTEKATIYRHALSRXXXXXXXXXXXXXXSMRSAQTA 570
           GT H+ TT+S+ CVDCGK+L +++YTE AT +R A                  ++  QTA
Sbjct: 169 GTAHDRTTSSVHCVDCGKVLFEEIYTENATFFRDAAG---GKDERKQALDAKHLKPVQTA 225

Query: 571 AEGVGQLHMKKQIAAS---------------------CSYAFKKEPTNEDLITEDEE--- 678
           +E  GQL +KK   +S                     CSYA  KEP N D  TE+++   
Sbjct: 226 SEAAGQLSLKKMQRSSSKINYDVLNTLFGGNEPNPMNCSYAIGKEPMNGDDETEEDDYSE 285

Query: 679 ------DREQESCS--YVYNYDYDAGDEYD 744
                 D EQESCS  Y Y+YDYDAGDE D
Sbjct: 286 TEWRSYDNEQESCSYDYDYDYDYDAGDEND 315


>ref|XP_023768925.1| uncharacterized protein LOC111917468 [Lactuca sativa]
 gb|PLY98062.1| hypothetical protein LSAT_4X53460 [Lactuca sativa]
          Length = 187

 Score =  122 bits (305), Expect = 1e-30
 Identities = 74/208 (35%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
 Frame = +1

Query: 121 SGRAVAWCSHCGKDCDTYHDHTINITSCVDCGKVLSEGAYFESPRRPFQKGNVANFEISY 300
           +GR +AWCSHCG+ C+T HD+  N TSC+DCGK+L E             GN+   E  Y
Sbjct: 5   AGRKMAWCSHCGRICNTSHDYPTNNTSCLDCGKILFE-------------GNLTTNESIY 51

Query: 301 KKAKVSHTSRLNKVFERGDTLWCTHCVRKGGTVHEHTTASICCVDCGKILLKDVYTEKAT 480
              ++SH +R    ++  +T+WC+HC+RK    H+HT+  I CVDCGK+LL+D   + AT
Sbjct: 52  NN-RISHATR---HYKGRETIWCSHCIRKSHIAHDHTSGIIQCVDCGKVLLEDKNVKNAT 107

Query: 481 IYRHALSRXXXXXXXXXXXXXXSMRSAQTAAEGVGQLHMKKQIAASCSYAFKKEPTNEDL 660
                                    S++   + +  L  +K I         K   NE  
Sbjct: 108 --------GGKDKRPKLAQTKKKRSSSKMNYDVINTLLGEKPIPMKEEDECSKSDGNE-- 157

Query: 661 ITEDEEDREQESCSYVYNYD--YDAGDE 738
                 D E ESCSY Y+YD  YD GDE
Sbjct: 158 --WKGYDNEHESCSYDYDYDYNYDGGDE 183


>ref|XP_022018180.1| transcription factor IIIB 60 kDa subunit-like [Helianthus annuus]
          Length = 505

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +1

Query: 364 WCTHCVRKGGTVHEHTTASICCVDCGKILLKDVYTEKATIYRHA 495
           WC HC +  GT H++TT +ICC DCGK++ +DVYTE  T  + A
Sbjct: 3   WCHHCSQNTGTYHDYTTGNICCTDCGKVVHQDVYTEDDTFVKDA 46


>ref|XP_023756982.1| transcription factor IIIB 60 kDa subunit-like isoform X1 [Lactuca
           sativa]
 ref|XP_023756983.1| transcription factor IIIB 60 kDa subunit-like isoform X1 [Lactuca
           sativa]
 gb|PLY90498.1| hypothetical protein LSAT_1X126300 [Lactuca sativa]
          Length = 576

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = +1

Query: 364 WCTHCVRKGGTVHEHTTASICCVDCGKILLKDVYTEKATIYRHA 495
           WC HC +   T  ++TT S+CCVDCGK++ +D+YTE  T  + A
Sbjct: 3   WCPHCAKNSETHRDYTTGSVCCVDCGKVVSQDLYTEDVTFVKDA 46


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