BLASTX nr result

ID: Chrysanthemum22_contig00047978 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00047978
         (525 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01824.1| Armadillo-like helical [Cynara cardunculus var. s...    62   4e-08
ref|XP_023750670.1| putative pumilio homolog 8, chloroplastic [L...    61   1e-07
ref|XP_021981841.1| putative pumilio homolog 8, chloroplastic [H...    55   9e-06

>gb|KVI01824.1| Armadillo-like helical [Cynara cardunculus var. scolymus]
          Length = 674

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 103 MVERIDITNENMKDDDELEMLLGEIPHATSSFH 5
           MVERI+ITNENMKDDDELE+LLGEIPHATS  H
Sbjct: 1   MVERIEITNENMKDDDELELLLGEIPHATSLSH 33


>ref|XP_023750670.1| putative pumilio homolog 8, chloroplastic [Lactuca sativa]
          Length = 621

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -3

Query: 103 MVERIDITNENMKDDDELEMLLGEIPHATSS 11
           MVERI+ITNEN+KDDDELE+LLGEIPHATSS
Sbjct: 1   MVERIEITNENIKDDDELELLLGEIPHATSS 31


>ref|XP_021981841.1| putative pumilio homolog 8, chloroplastic [Helianthus annuus]
 gb|OTG14459.1| putative armadillo-type fold protein [Helianthus annuus]
          Length = 558

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -3

Query: 103 MVERIDITNENMKDDDELEMLLGEIPHATSSFHV 2
           MVERI++TNE  KDDDELEMLL EIPHAT+S ++
Sbjct: 1   MVERIEVTNERSKDDDELEMLLDEIPHATASLNL 34


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