BLASTX nr result
ID: Chrysanthemum22_contig00047976
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00047976
(375 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023730230.1| la-related protein 6C-like [Lactuca sativa] ... 123 5e-31
ref|XP_021989171.1| la-related protein 6C-like [Helianthus annuu... 121 2e-30
gb|KVH93263.1| Ataxin-2, C-terminal [Cynara cardunculus var. sco... 120 5e-30
ref|XP_023754750.1| la-related protein 6C [Lactuca sativa] >gi|1... 104 5e-24
ref|XP_022026905.1| la-related protein 6C isoform X2 [Helianthus... 99 4e-22
ref|XP_023898664.1| la-related protein 6C [Quercus suber] 99 5e-22
gb|POE52961.1| la-related protein 6c [Quercus suber] 99 6e-22
ref|XP_022026904.1| la-related protein 6C isoform X1 [Helianthus... 99 7e-22
ref|XP_010248222.1| PREDICTED: la-related protein 6C-like [Nelum... 97 2e-21
ref|XP_015874228.1| PREDICTED: la-related protein 6C [Ziziphus j... 94 3e-20
dbj|GAV61381.1| RRM_1 domain-containing protein/La domain-contai... 94 6e-20
gb|OVA10491.1| RNA recognition motif domain [Macleaya cordata] 92 1e-19
ref|XP_015944941.1| la-related protein 6C isoform X2 [Arachis du... 93 1e-19
ref|XP_015944939.1| la-related protein 6C isoform X1 [Arachis du... 93 1e-19
gb|KZN04027.1| hypothetical protein DCAR_004825 [Daucus carota s... 92 2e-19
ref|XP_017233002.1| PREDICTED: la-related protein 6C [Daucus car... 92 3e-19
ref|XP_010107985.1| la-related protein 6C [Morus notabilis] >gi|... 92 3e-19
gb|PPR95066.1| hypothetical protein GOBAR_AA25602 [Gossypium bar... 85 3e-19
gb|POO03063.1| Lupus La protein [Trema orientalis] 91 6e-19
dbj|GAY58216.1| hypothetical protein CUMW_185390 [Citrus unshiu] 91 6e-19
>ref|XP_023730230.1| la-related protein 6C-like [Lactuca sativa]
gb|PLY97551.1| hypothetical protein LSAT_5X117721 [Lactuca sativa]
Length = 426
Score = 123 bits (309), Expect = 5e-31
Identities = 65/82 (79%), Positives = 67/82 (81%), Gaps = 8/82 (9%)
Frame = -2
Query: 299 EENSKKGWAQGRGKSKSRTPTHISRGLLQLSPQT---SSPVHLEASPTKQSPKGPRMPDG 129
EENSKKGWA+ RGKSKSRTPTH SRGLL SPQT SS +HLEAS KQSPKGPRMPDG
Sbjct: 345 EENSKKGWARARGKSKSRTPTHSSRGLLAPSPQTQTSSSIIHLEASSMKQSPKGPRMPDG 404
Query: 128 TRGFTMGRGK-----PILTGIP 78
TRGFTMGRGK PILTGIP
Sbjct: 405 TRGFTMGRGKPISNPPILTGIP 426
>ref|XP_021989171.1| la-related protein 6C-like [Helianthus annuus]
gb|OTG11859.1| putative lupus La protein [Helianthus annuus]
Length = 409
Score = 121 bits (304), Expect = 2e-30
Identities = 61/75 (81%), Positives = 65/75 (86%)
Frame = -2
Query: 302 LEENSKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDGTR 123
++ENSKKGWA+G GKSKSRTPTH + GLL S TSS HLEASPTK SPKGPRMPDGTR
Sbjct: 336 IQENSKKGWARGCGKSKSRTPTHGTCGLLAPSLHTSSSAHLEASPTK-SPKGPRMPDGTR 394
Query: 122 GFTMGRGKPILTGIP 78
GFTMGRGKPILTGIP
Sbjct: 395 GFTMGRGKPILTGIP 409
>gb|KVH93263.1| Ataxin-2, C-terminal [Cynara cardunculus var. scolymus]
Length = 418
Score = 120 bits (302), Expect = 5e-30
Identities = 66/82 (80%), Positives = 68/82 (82%), Gaps = 8/82 (9%)
Frame = -2
Query: 299 EENSKKGWA-QGRGKSKSRTPTHISRGLLQLSPQTSSPV-HLEASPTKQSPKGPRMPDGT 126
EENSKKGWA +GRGKSKSRTP+H SRGLL SPQTSS V HLEAS TKQS KGPRMPDGT
Sbjct: 337 EENSKKGWAARGRGKSKSRTPSHSSRGLLSPSPQTSSSVVHLEASSTKQSAKGPRMPDGT 396
Query: 125 RGFTMGRGK------PILTGIP 78
RGFTMGRGK PILTGIP
Sbjct: 397 RGFTMGRGKPIASNPPILTGIP 418
>ref|XP_023754750.1| la-related protein 6C [Lactuca sativa]
gb|PLY92333.1| hypothetical protein LSAT_9X110320 [Lactuca sativa]
Length = 414
Score = 104 bits (260), Expect = 5e-24
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = -2
Query: 299 EENSKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDGTRG 120
EE SKKGWA+ RGKSK RTPTH RG+L SPQ+S H E S K SPKGPRMPDGTRG
Sbjct: 337 EEGSKKGWARLRGKSKIRTPTHNGRGVLSGSPQSSGSAHSETSSPKLSPKGPRMPDGTRG 396
Query: 119 FTMGRGKPI 93
FTMGRGKP+
Sbjct: 397 FTMGRGKPM 405
>ref|XP_022026905.1| la-related protein 6C isoform X2 [Helianthus annuus]
Length = 361
Score = 99.0 bits (245), Expect = 4e-22
Identities = 48/70 (68%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -2
Query: 299 EENSKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEAS-PTKQSPKGPRMPDGTR 123
EE SKKGWA+GRGKSK RT +H RG+L SPQ+S H E + K SPKGPRMPDGTR
Sbjct: 283 EEGSKKGWARGRGKSKIRTSSHNGRGVLSQSPQSSGSTHSETTLSPKLSPKGPRMPDGTR 342
Query: 122 GFTMGRGKPI 93
GFTMGRGKP+
Sbjct: 343 GFTMGRGKPM 352
>ref|XP_023898664.1| la-related protein 6C [Quercus suber]
Length = 411
Score = 99.4 bits (246), Expect = 5e-22
Identities = 54/75 (72%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Frame = -2
Query: 299 EENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQT-SSPVHLEASPTKQSPKGPRMPD 132
EENS KKGWAQGRGKS+ R +HI RGL LSPQ SS VH EAS KQ+ KGPRMPD
Sbjct: 325 EENSVGTKKGWAQGRGKSRGRAQSHIGRGLNALSPQLCSSGVHCEAS-AKQASKGPRMPD 383
Query: 131 GTRGFTMGRGKPILT 87
GTRGFTMGRGKP+ T
Sbjct: 384 GTRGFTMGRGKPLST 398
>gb|POE52961.1| la-related protein 6c [Quercus suber]
Length = 445
Score = 99.4 bits (246), Expect = 6e-22
Identities = 54/75 (72%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Frame = -2
Query: 299 EENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQT-SSPVHLEASPTKQSPKGPRMPD 132
EENS KKGWAQGRGKS+ R +HI RGL LSPQ SS VH EAS KQ+ KGPRMPD
Sbjct: 359 EENSVGTKKGWAQGRGKSRGRAQSHIGRGLNALSPQLCSSGVHCEAS-AKQASKGPRMPD 417
Query: 131 GTRGFTMGRGKPILT 87
GTRGFTMGRGKP+ T
Sbjct: 418 GTRGFTMGRGKPLST 432
>ref|XP_022026904.1| la-related protein 6C isoform X1 [Helianthus annuus]
gb|OTG31137.1| putative RNA-binding protein [Helianthus annuus]
Length = 414
Score = 99.0 bits (245), Expect = 7e-22
Identities = 48/70 (68%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -2
Query: 299 EENSKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEAS-PTKQSPKGPRMPDGTR 123
EE SKKGWA+GRGKSK RT +H RG+L SPQ+S H E + K SPKGPRMPDGTR
Sbjct: 336 EEGSKKGWARGRGKSKIRTSSHNGRGVLSQSPQSSGSTHSETTLSPKLSPKGPRMPDGTR 395
Query: 122 GFTMGRGKPI 93
GFTMGRGKP+
Sbjct: 396 GFTMGRGKPM 405
>ref|XP_010248222.1| PREDICTED: la-related protein 6C-like [Nelumbo nucifera]
Length = 410
Score = 97.4 bits (241), Expect = 2e-21
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -2
Query: 290 SKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDGTRGFTM 111
SKKGWA+GRGKS+ R +H RGLL SPQ++S V EA+ KQ+P+GPRMPDGTRGFTM
Sbjct: 330 SKKGWARGRGKSRGRCQSHNGRGLLAPSPQSTSSVLSEATTIKQTPRGPRMPDGTRGFTM 389
Query: 110 GRGKPI 93
GRGKP+
Sbjct: 390 GRGKPL 395
>ref|XP_015874228.1| PREDICTED: la-related protein 6C [Ziziphus jujuba]
Length = 403
Score = 94.4 bits (233), Expect = 3e-20
Identities = 48/74 (64%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
Frame = -2
Query: 299 EENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDG 129
EENS KKGWA+GRGK++ R+ H RGLL +PQ++S + EAS KQS KGPRMPDG
Sbjct: 322 EENSGGSKKGWARGRGKARGRSQNHSGRGLLAPTPQSNSIIQSEAS-AKQSSKGPRMPDG 380
Query: 128 TRGFTMGRGKPILT 87
TRGFTMGRGKP+ T
Sbjct: 381 TRGFTMGRGKPLST 394
>dbj|GAV61381.1| RRM_1 domain-containing protein/La domain-containing protein/PAM2
domain-containing protein [Cephalotus follicularis]
Length = 412
Score = 93.6 bits (231), Expect = 6e-20
Identities = 47/69 (68%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -2
Query: 290 SKKGWAQGRGKSKSRTPTHISRGLLQL-SPQTSSPVHLEASPTKQSPKGPRMPDGTRGFT 114
SKKGWA+GRGK + R + I RGLL SPQ+SS + EASP KQ+ KGPRMPDGTRGFT
Sbjct: 336 SKKGWAKGRGKGRGRVQSQIGRGLLAAASPQSSSAIQCEASP-KQTSKGPRMPDGTRGFT 394
Query: 113 MGRGKPILT 87
MGRGKP+ T
Sbjct: 395 MGRGKPLST 403
>gb|OVA10491.1| RNA recognition motif domain [Macleaya cordata]
Length = 309
Score = 91.7 bits (226), Expect = 1e-19
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = -2
Query: 290 SKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDGTRGFTM 111
S+KGWA+ RGK++ R+ H RGL+ SPQ+ S + EAS K +P+GPRMPDGTRGFTM
Sbjct: 231 SRKGWARVRGKTRGRSQNHSGRGLIAPSPQSCSSIQCEASTNKHTPRGPRMPDGTRGFTM 290
Query: 110 GRGKPI 93
GRGKP+
Sbjct: 291 GRGKPL 296
>ref|XP_015944941.1| la-related protein 6C isoform X2 [Arachis duranensis]
Length = 413
Score = 92.8 bits (229), Expect = 1e-19
Identities = 50/81 (61%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
Frame = -2
Query: 326 SKVTVSW*LEENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQS 156
+++T ++ENS KKGWA+GRGK + RT TH RGLL Q SS V EAS TK +
Sbjct: 323 TELTADTNVDENSVGSKKGWARGRGKGRGRTQTHAGRGLLAPPSQPSSVVLCEAS-TKSN 381
Query: 155 PKGPRMPDGTRGFTMGRGKPI 93
KGPRMPDGTRGFTMGRGKPI
Sbjct: 382 TKGPRMPDGTRGFTMGRGKPI 402
>ref|XP_015944939.1| la-related protein 6C isoform X1 [Arachis duranensis]
Length = 419
Score = 92.8 bits (229), Expect = 1e-19
Identities = 50/81 (61%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
Frame = -2
Query: 326 SKVTVSW*LEENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQS 156
+++T ++ENS KKGWA+GRGK + RT TH RGLL Q SS V EAS TK +
Sbjct: 329 TELTADTNVDENSVGSKKGWARGRGKGRGRTQTHAGRGLLAPPSQPSSVVLCEAS-TKSN 387
Query: 155 PKGPRMPDGTRGFTMGRGKPI 93
KGPRMPDGTRGFTMGRGKPI
Sbjct: 388 TKGPRMPDGTRGFTMGRGKPI 408
>gb|KZN04027.1| hypothetical protein DCAR_004825 [Daucus carota subsp. sativus]
Length = 366
Score = 92.0 bits (227), Expect = 2e-19
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -2
Query: 290 SKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDGTRGFTM 111
+KKGWA+GRGKS+ R P RG L SP +SS E S TKQ+ KGPRMPDGTRGFT+
Sbjct: 291 AKKGWARGRGKSRLRAPIQTGRGSLLSSPMSSSSPLCEGSSTKQATKGPRMPDGTRGFTL 350
Query: 110 GRGKPILT 87
GRGKPI T
Sbjct: 351 GRGKPICT 358
>ref|XP_017233002.1| PREDICTED: la-related protein 6C [Daucus carota subsp. sativus]
Length = 441
Score = 92.0 bits (227), Expect = 3e-19
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -2
Query: 290 SKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDGTRGFTM 111
+KKGWA+GRGKS+ R P RG L SP +SS E S TKQ+ KGPRMPDGTRGFT+
Sbjct: 366 AKKGWARGRGKSRLRAPIQTGRGSLLSSPMSSSSPLCEGSSTKQATKGPRMPDGTRGFTL 425
Query: 110 GRGKPILT 87
GRGKPI T
Sbjct: 426 GRGKPICT 433
>ref|XP_010107985.1| la-related protein 6C [Morus notabilis]
gb|EXC17385.1| La-related protein 7 [Morus notabilis]
Length = 397
Score = 91.7 bits (226), Expect = 3e-19
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = -2
Query: 299 EENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDG 129
EE+S KKGW + RGK++ R HI RGLL SPQ+S+ E SP KQSPKGPRMPDG
Sbjct: 325 EESSTGQKKGWGRVRGKAQGRASNHIGRGLLAPSPQSSNGNQGEVSP-KQSPKGPRMPDG 383
Query: 128 TRGFTMGRGKPILT 87
TRGFTMGRGKP+ T
Sbjct: 384 TRGFTMGRGKPLRT 397
>gb|PPR95066.1| hypothetical protein GOBAR_AA25602 [Gossypium barbadense]
Length = 82
Score = 85.1 bits (209), Expect = 3e-19
Identities = 43/66 (65%), Positives = 48/66 (72%)
Frame = -2
Query: 290 SKKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDGTRGFTM 111
SK+GWA+GRGK + R H RGLL LS Q + V EA P KQ KGPRMPDGTRGFTM
Sbjct: 18 SKRGWAKGRGKGRGRVQNHSGRGLLALS-QPGNAVQCEA-PMKQMAKGPRMPDGTRGFTM 75
Query: 110 GRGKPI 93
GRGKP+
Sbjct: 76 GRGKPL 81
>gb|POO03063.1| Lupus La protein [Trema orientalis]
Length = 404
Score = 90.9 bits (224), Expect = 6e-19
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Frame = -2
Query: 299 EENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPDG 129
EENS KKGW++GRGK++ R H RGL+ SPQ+S+ + E S TK KGPRMPDG
Sbjct: 321 EENSAGLKKGWSRGRGKARGRAQNHSGRGLIAPSPQSSTGIQCEGS-TKHGSKGPRMPDG 379
Query: 128 TRGFTMGRGKPILT 87
TRGFTMGRGKP+ T
Sbjct: 380 TRGFTMGRGKPLST 393
>dbj|GAY58216.1| hypothetical protein CUMW_185390 [Citrus unshiu]
Length = 424
Score = 90.9 bits (224), Expect = 6e-19
Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Frame = -2
Query: 302 LEENS---KKGWAQGRGKSKSRTPTHISRGLLQLSPQTSSPVHLEASPTKQSPKGPRMPD 132
+EENS KKGWA+GRGK + R +H SR LL PQ+S+ EAS KQ+ KGPRMPD
Sbjct: 344 VEENSGGSKKGWARGRGKGRGRAQSHNSRSLLTPPPQSSNATQNEAS-AKQTFKGPRMPD 402
Query: 131 GTRGFTMGRGKPILTGIP 78
GTRGFTMGRGKP+ + +P
Sbjct: 403 GTRGFTMGRGKPLSSPVP 420