BLASTX nr result

ID: Chrysanthemum22_contig00047894 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00047894
         (460 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07610.1| Senescence regulator [Cynara cardunculus var. sco...    57   1e-06
ref|XP_023771785.1| uncharacterized protein LOC111920432 [Lactuc...    55   3e-06
ref|XP_022014483.1| uncharacterized protein LOC110913981 [Helian...    54   7e-06

>gb|KVI07610.1| Senescence regulator [Cynara cardunculus var. scolymus]
          Length = 250

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -2

Query: 327 VPEKLQPDLTDF---EFNESDVIFSSSSDFTDNDVIFSSPSPENVSTSPPVNRSYNSGIY 157
           VPEK   DL +    EF+ESDV +SSSSD +D       PSP NVS+SPP++R YNSG+Y
Sbjct: 35  VPEK-SSDLNNGGIEEFHESDVFWSSSSDVSD------IPSPSNVSSSPPIHRQYNSGLY 87


>ref|XP_023771785.1| uncharacterized protein LOC111920432 [Lactuca sativa]
 gb|PLY79375.1| hypothetical protein LSAT_9X50340 [Lactuca sativa]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
 Frame = -2

Query: 327 VPEKLQPDLTD-----FEFNESDVIFSSSSDFTDNDVIFSSPSPENVSTSPPVNRSYNSG 163
           VPEK  PDL +      EFNESDV +SSSSD +D      SP   NVS+SPP++R YNSG
Sbjct: 35  VPEK-SPDLNNNNNGGLEFNESDVFWSSSSDVSD----IQSP---NVSSSPPIHRQYNSG 86

Query: 162 IY 157
           +Y
Sbjct: 87  LY 88


>ref|XP_022014483.1| uncharacterized protein LOC110913981 [Helianthus annuus]
 gb|OTF95660.1| putative senescence regulator S40 [Helianthus annuus]
          Length = 226

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 9/66 (13%)
 Frame = -2

Query: 327 VPEKLQPDLTD-------FEFNESDVIFS--SSSDFTDNDVIFSSPSPENVSTSPPVNRS 175
           +P++ QPDL +       FEF+ESDV++S  SSSD   +++   SPSP + STSPP++R 
Sbjct: 32  LPQQQQPDLNNNNNNTNAFEFHESDVVWSPSSSSDDDASELPSPSPSPSHASTSPPLHRH 91

Query: 174 YNSGIY 157
             SG+Y
Sbjct: 92  NTSGLY 97


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