BLASTX nr result

ID: Chrysanthemum22_contig00047659 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00047659
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022006159.1| protein ROS1-like [Helianthus annuus] >gi|11...    89   6e-18
gb|KVI09651.1| DNA glycosylase [Cynara cardunculus var. scolymus]      72   3e-12

>ref|XP_022006159.1| protein ROS1-like [Helianthus annuus]
 gb|OTF99416.1| putative DNA glycosylase [Helianthus annuus]
          Length = 1686

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 61/142 (42%), Positives = 74/142 (52%), Gaps = 29/142 (20%)
 Frame = -1

Query: 341 GDPKEAPRMSVSMNN----DQAS--CSTINPTLMGNVVADSMNPWNPVTSSTF------- 201
           GDP  AP   ++M+N    D  S   +T    L  N +  S N W PVTS T        
Sbjct: 52  GDPTLAPGRPMTMDNGIGCDMGSWNATTEGSILQRNGIGQSGNSWFPVTSETQIDERANP 111

Query: 200 --------PAETENWQDLLGIYTGFLQEKKPDTSRILEDINKTPPPIVRNNGNQ------ 63
                    +ETENW DLLG+YT  LQEK  DT+ IL D N+ PPP+V NNGNQ      
Sbjct: 112 VPVEMHENRSETENWGDLLGMYTDLLQEKTLDTNGILGDNNRQPPPVVCNNGNQSWVASN 171

Query: 62  -NLT-TSTHSSYQNNTSSQAST 3
            NLT T    +YQN T +QA+T
Sbjct: 172 RNLTQTLNRVTYQNQTPNQATT 193


>gb|KVI09651.1| DNA glycosylase [Cynara cardunculus var. scolymus]
          Length = 2029

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 18/102 (17%)
 Frame = -1

Query: 254 NVVADSMNPWNPVTSSTFP---------AETENWQDLLGIYTGFLQEKKPDTSRILEDIN 102
           N +  S N W+P T               E+ENWQDL+G+YTG L+E   D + +LEDIN
Sbjct: 129 NGIGQSRNSWSPATPEKIVNQRSNTENGLESENWQDLIGMYTGLLKEDTVDKNGVLEDIN 188

Query: 101 KTPPPIVRNNGNQNLTTS-----TH----SSYQNNTSSQAST 3
            TP   VR+ GNQN   S     TH    S Y N+TS+QAST
Sbjct: 189 PTPSK-VRDYGNQNWVASNNKNATHRSSPSPYWNHTSNQAST 229


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