BLASTX nr result

ID: Chrysanthemum22_contig00047313 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00047313
         (735 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY80414.1| hypothetical protein LSAT_8X112340 [Lactuca sativa]     79   1e-14

>gb|PLY80414.1| hypothetical protein LSAT_8X112340 [Lactuca sativa]
          Length = 157

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
 Frame = +2

Query: 53  ATPPQSPKNIGSDEPRSPSVEATTTPTRIIYRVSASARVAGSPVTEATXXXXXXXXXXXX 232
           +TPP SP    S  PR P     TTP+++    S+S  +   P    T            
Sbjct: 25  STPPSSP----SQPPRRPRRAGATTPSKLSQAASSSTNLPPPPTPTPT------------ 68

Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXQTQPVTGQIITGNSSCGASSGNPLTPSKRQVQCPIC 412
                                      P T           ++ G  L  ++R V CPIC
Sbjct: 69  ---------------------------PPTP----------SADGILLGTARRPVICPIC 91

Query: 413 KRNMYHEKALCGHIRWHTQDERDANSAEIQETLALSRQVEEAIR------VAKKIKIPDL 574
           K++MYHEKALCGHIRWHTQ+ER A S +I    ALS  V    R       +K+ K+PDL
Sbjct: 92  KKDMYHEKALCGHIRWHTQEERLAASRDIAR--ALSANVVSGQRGDGEQGPSKRFKLPDL 149

Query: 575 NE 580
           NE
Sbjct: 150 NE 151


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