BLASTX nr result

ID: Chrysanthemum22_contig00047288 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00047288
         (459 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05388.1| hypothetical protein Ccrd_016284 [Cynara carduncu...   140   8e-38
ref|XP_023762814.1| E3 ubiquitin-protein ligase MBR2-like [Lactu...   128   3e-33
ref|XP_021976483.1| probable E3 ubiquitin-protein ligase RHG1A [...   124   1e-31

>gb|KVI05388.1| hypothetical protein Ccrd_016284 [Cynara cardunculus var. scolymus]
          Length = 306

 Score =  140 bits (352), Expect = 8e-38
 Identities = 82/160 (51%), Positives = 92/160 (57%), Gaps = 10/160 (6%)
 Frame = +2

Query: 8   KKKLFGSLTIKGLGCGRYSSPAAAVTVPETTXXXXXXXXXXXXXXXX---GFCTE----- 163
           +KKLF  LT+KG GCGRYS+ A AV  P+                     G C E     
Sbjct: 38  RKKLFAFLTLKGFGCGRYSTLAVAVHPPDAISPEKMRRRKKNKKKPRRNRGSCPENVVVT 97

Query: 164 --DACCTCAPPSIGFTYDVAHSTSADLHRRNHRQHPRTPRQATDLQQASSTTQIDHSTXX 337
             D CCT  PP IGFTYDVA +TSAD HRRNHRQ  R  RQATDLQQ  ST Q D++T  
Sbjct: 98  VPDVCCT--PPGIGFTYDVAENTSADAHRRNHRQRSRATRQATDLQQPWSTAQTDNATFI 155

Query: 338 XXXXXXXXQFNRLQHRSPGGVISEIVMLEHDPLLNGAFEG 457
                   Q+N LQ RSPGG ISEIVM EH+PL +G  EG
Sbjct: 156 RSNVSDARQYNLLQRRSPGG-ISEIVMFEHNPLSDGRLEG 194


>ref|XP_023762814.1| E3 ubiquitin-protein ligase MBR2-like [Lactuca sativa]
 gb|PLY86307.1| hypothetical protein LSAT_8X42581 [Lactuca sativa]
          Length = 304

 Score =  128 bits (321), Expect = 3e-33
 Identities = 81/160 (50%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
 Frame = +2

Query: 8   KKKLFGSLTIKGLGCGRYSSPAAAV-----TVPETTXXXXXXXXXXXXXXXXG-----FC 157
           +K LFG L+   LGCGR SSPAAAV      +PE T                        
Sbjct: 39  RKNLFGFLS---LGCGRCSSPAAAVHPPGRILPENTRRRRRKKKKQRRNSGSRQENMVVI 95

Query: 158 TEDACCTCAPPSIGFTYDVAHSTSADLHRRNHRQHPRTPRQATDLQQASSTTQIDHSTXX 337
             D CCT  PP IGFTYDVA STSAD HRRNHRQ  R  RQA DLQQ  STT++D +   
Sbjct: 96  VPDVCCT--PPGIGFTYDVAQSTSADAHRRNHRQRSRATRQAADLQQPWSTTEVDATAFI 153

Query: 338 XXXXXXXXQFNRLQHRSPGGVISEIVMLEHDPLLNGAFEG 457
                   Q+ RLQ RSPGG ISEIVMLE +PLL+G  EG
Sbjct: 154 RSNVSDSRQYTRLQRRSPGG-ISEIVMLELNPLLDGRLEG 192


>ref|XP_021976483.1| probable E3 ubiquitin-protein ligase RHG1A [Helianthus annuus]
 gb|OTG17536.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 296

 Score =  124 bits (310), Expect = 1e-31
 Identities = 73/155 (47%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
 Frame = +2

Query: 8   KKKLFGSLTIKGLGCGRYSS----PAAAVTVPETTXXXXXXXXXXXXXXXXGFCTEDACC 175
           +KKLFG L+   LGCGR+SS    P + V+                     G C E+ CC
Sbjct: 33  RKKLFGFLSFVDLGCGRFSSSVQPPGSTVSEKTRRRRKNKKKKKRKQGRNRGSCPENVCC 92

Query: 176 TCAPPSIGFTYDVAHSTSADLHRRNHRQHPRTPRQAT-DLQQASSTTQIDHSTXXXXXXX 352
             APP +GFTYDVAHSTSAD  RR+HRQ  R  RQAT D QQ  +  Q++          
Sbjct: 93  --APPVVGFTYDVAHSTSADPSRRHHRQRSRASRQATVDRQQTLNAEQVEDVGFVRSNVS 150

Query: 353 XXXQFNRLQHRSPGGVISEIVMLEHDPLLNGAFEG 457
              Q+NRL  RSPGG ISEIVM+EH+PLL+G  EG
Sbjct: 151 DSRQYNRLPRRSPGG-ISEIVMIEHNPLLDGRIEG 184


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