BLASTX nr result

ID: Chrysanthemum22_contig00047019 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00047019
         (446 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY80602.1| hypothetical protein LSAT_6X12060 [Lactuca sativa]      58   7e-07
ref|XP_023770172.1| probable GABA transporter 2 [Lactuca sativa]       58   7e-07
gb|KVH90099.1| hypothetical protein Ccrd_007993 [Cynara carduncu...    57   1e-06
ref|XP_021982440.1| probable GABA transporter 2 isoform X2 [Heli...    57   2e-06
ref|XP_021982439.1| probable GABA transporter 2 isoform X1 [Heli...    57   2e-06
gb|OTG31845.1| putative amino acid transporter, transmembrane do...    55   4e-06
ref|XP_022031251.1| probable GABA transporter 2 [Helianthus annuus]    55   5e-06
ref|XP_021972768.1| probable GABA transporter 2 [Helianthus annu...    55   5e-06

>gb|PLY80602.1| hypothetical protein LSAT_6X12060 [Lactuca sativa]
          Length = 449

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +1

Query: 355 AGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           AGLSKNAPPRDYSLE SKFS+VMSAFTSIS
Sbjct: 197 AGLSKNAPPRDYSLEDSKFSVVMSAFTSIS 226


>ref|XP_023770172.1| probable GABA transporter 2 [Lactuca sativa]
          Length = 459

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +1

Query: 355 AGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           AGLSKNAPPRDYSLE SKFS+VMSAFTSIS
Sbjct: 207 AGLSKNAPPRDYSLEDSKFSVVMSAFTSIS 236


>gb|KVH90099.1| hypothetical protein Ccrd_007993 [Cynara cardunculus var. scolymus]
          Length = 447

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 349 LFAGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           + AG+SKNAPPRDYSLE S FSMVMSAFTSIS
Sbjct: 193 IHAGISKNAPPRDYSLEDSNFSMVMSAFTSIS 224


>ref|XP_021982440.1| probable GABA transporter 2 isoform X2 [Helianthus annuus]
 gb|OTG15064.1| putative amino acid transporter, transmembrane domain-containing
           protein [Helianthus annuus]
          Length = 462

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 334 VTDMILFAGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           V    + AGLSK+AP RDYSLESSKFSMVMSAFTSIS
Sbjct: 203 VVGACIHAGLSKDAPARDYSLESSKFSMVMSAFTSIS 239


>ref|XP_021982439.1| probable GABA transporter 2 isoform X1 [Helianthus annuus]
          Length = 463

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 334 VTDMILFAGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           V    + AGLSK+AP RDYSLESSKFSMVMSAFTSIS
Sbjct: 204 VVGACIHAGLSKDAPARDYSLESSKFSMVMSAFTSIS 240


>gb|OTG31845.1| putative amino acid transporter, transmembrane domain-containing
           protein [Helianthus annuus]
          Length = 298

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +1

Query: 349 LFAGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           L AG+SKNAP RDYSL+SSKFS+VMSAFTSIS
Sbjct: 172 LHAGISKNAPSRDYSLQSSKFSVVMSAFTSIS 203


>ref|XP_022031251.1| probable GABA transporter 2 [Helianthus annuus]
          Length = 473

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +1

Query: 349 LFAGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           L AG+SKNAP RDYSL+SSKFS+VMSAFTSIS
Sbjct: 219 LHAGISKNAPSRDYSLQSSKFSVVMSAFTSIS 250


>ref|XP_021972768.1| probable GABA transporter 2 [Helianthus annuus]
 gb|OTG20257.1| putative transmembrane amino acid transporter family protein
           [Helianthus annuus]
          Length = 477

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +1

Query: 349 LFAGLSKNAPPRDYSLESSKFSMVMSAFTSIS 444
           + AG+SKNAP RDYSLESSKFS+VMSAFTSIS
Sbjct: 223 IHAGVSKNAPQRDYSLESSKFSVVMSAFTSIS 254


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