BLASTX nr result

ID: Chrysanthemum22_contig00046500 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00046500
         (493 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021989662.1| nucleolar protein 8 isoform X1 [Helianthus a...   127   8e-31
ref|XP_021989663.1| uncharacterized RNA-binding protein P16F5.06...   126   1e-30
gb|OTG12405.1| putative nucleotide-binding alpha-beta plait doma...   123   2e-29
gb|KVH87950.1| hypothetical protein Ccrd_024702 [Cynara carduncu...   109   1e-24
ref|XP_023729687.1| uncharacterized protein LOC111877389 [Lactuc...    75   1e-12
ref|XP_022155065.1| uncharacterized protein LOC111022200 [Momord...    57   3e-06

>ref|XP_021989662.1| nucleolar protein 8 isoform X1 [Helianthus annuus]
          Length = 681

 Score =  127 bits (318), Expect = 8e-31
 Identities = 73/152 (48%), Positives = 106/152 (69%), Gaps = 2/152 (1%)
 Frame = +3

Query: 24  VVPEQSKNSQTRVDTPNDNKTEAESSTKPSGNTSLRSIKSSWKNLLGQKRNTSFNISNFI 203
           VV +QS+NS+ RVDT  ++K E     K S N SLRS+KSSWK L+GQKR+TSF+IS+FI
Sbjct: 333 VVRKQSENSRARVDTQVNDKKEVGVVRKQSENNSLRSLKSSWKGLIGQKRDTSFSISDFI 392

Query: 204 ATVSQKEEELKDDNKKRKLDSDKKEPGLDIKEESTADVGPVTTEVSISDILANDCREMEE 383
           A  S+KEEEL  D KKRKL++D+  PG         +VG VTTE +I DI+AN+  + EE
Sbjct: 393 A--SRKEEELNTD-KKRKLEADENRPG--------TEVGDVTTENNIPDIIANNYEQKEE 441

Query: 384 EPKTNNLEM--PDVLSDVINQQDDERKADDIN 473
           +PK +N +    +  S+ ++Q+++E K++D++
Sbjct: 442 QPKADNRDQKEEEPKSEDVDQKEEEPKSEDVD 473


>ref|XP_021989663.1| uncharacterized RNA-binding protein P16F5.06 isoform X2 [Helianthus
           annuus]
          Length = 657

 Score =  126 bits (316), Expect = 1e-30
 Identities = 73/158 (46%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
 Frame = +3

Query: 6   KETNNSVVPEQSKNSQTRVDTPNDNKTEAESSTKPSGNTSLRSIKSSWKNLLGQKRNTSF 185
           K+  +S   E S NS+ RVDT  ++K E     K S N SLRS+KSSWK L+GQKR+TSF
Sbjct: 303 KKRKSSHTEETSGNSRARVDTQENDKKEVGVVRKQSENNSLRSLKSSWKGLIGQKRDTSF 362

Query: 186 NISNFIATVSQKEEELKDDNKKRKLDSDKKEPGLDIKEESTADVGPVTTEVSISDILAND 365
           +IS+FIA  S+KEEEL  D KKRKL++D+  PG         +VG VTTE +I DI+AN+
Sbjct: 363 SISDFIA--SRKEEELNTD-KKRKLEADENRPG--------TEVGDVTTENNIPDIIANN 411

Query: 366 CREMEEEPKTNNLEM--PDVLSDVINQQDDERKADDIN 473
             + EE+PK +N +    +  S+ ++Q+++E K++D++
Sbjct: 412 YEQKEEQPKADNRDQKEEEPKSEDVDQKEEEPKSEDVD 449


>gb|OTG12405.1| putative nucleotide-binding alpha-beta plait domain-containing
           protein [Helianthus annuus]
          Length = 650

 Score =  123 bits (308), Expect = 2e-29
 Identities = 72/150 (48%), Positives = 103/150 (68%), Gaps = 2/150 (1%)
 Frame = +3

Query: 24  VVPEQSKNSQTRVDTPNDNKTEAESSTKPSGNTSLRSIKSSWKNLLGQKRNTSFNISNFI 203
           VV +QS+NS+ RVDT  ++K E     K S N SLRS+KSSWK L+GQKR+TSF+IS+FI
Sbjct: 333 VVRKQSENSRARVDTQVNDKKEVGVVRKQSENNSLRSLKSSWKGLIGQKRDTSFSISDFI 392

Query: 204 ATVSQKEEELKDDNKKRKLDSDKKEPGLDIKEESTADVGPVTTEVSISDILANDCREMEE 383
           A  S+KEEEL  D KKRKL++D+  PG         +VG VTTE +I DI+AN+  + EE
Sbjct: 393 A--SRKEEELNTD-KKRKLEADENRPG--------TEVGDVTTENNIPDIIANNYEQKEE 441

Query: 384 EPKTNNLEM--PDVLSDVINQQDDERKADD 467
           +PK +N +    +  S+ ++Q+++E K ++
Sbjct: 442 QPKADNRDQKEEEPKSEDVDQKEEEPKKEE 471


>gb|KVH87950.1| hypothetical protein Ccrd_024702 [Cynara cardunculus var. scolymus]
          Length = 693

 Score =  109 bits (273), Expect = 1e-24
 Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 18/176 (10%)
 Frame = +3

Query: 12  TNNSVVPEQSKNSQTRVDTPNDNKTEAESSTKPSGNTSLRSIKSSWKNLLGQKRNTSFNI 191
           ++ SV+ E   NSQ  +DT  D+KTE +S TK SG+ SLRS+KS+WK+L+GQ+ N  F+I
Sbjct: 365 SSGSVISEALGNSQIHLDTREDSKTEIKSGTKQSGSNSLRSLKSTWKDLIGQQGNMPFSI 424

Query: 192 SNFIATVSQ-KEEELKDD---------NKKRKLDSDKKEPGLDIKEESTADVGPVTTEVS 341
           S+ IATV Q K E+LK D         +KKRK + D+ E    +  E+ +    +  EV 
Sbjct: 425 SSIIATVPQEKSEKLKGDDTPKKSLVSSKKRKRECDRIELVSSV-PETRSSTSHINKEV- 482

Query: 342 ISDILANDCREMEEEPKTNNLEMP-------DVLSDVIN-QQDDERKADDINDVKN 485
           + DILAND  + +EEP+ ++L+MP        ++SDV++ +++DE   DDI DV+N
Sbjct: 483 VLDILAND-PQQKEEPRADDLDMPLTKIADQFMISDVLSKEKEDEPTTDDI-DVEN 536


>ref|XP_023729687.1| uncharacterized protein LOC111877389 [Lactuca sativa]
 gb|PLY77061.1| hypothetical protein LSAT_5X82020 [Lactuca sativa]
          Length = 512

 Score = 75.1 bits (183), Expect = 1e-12
 Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +3

Query: 24  VVPEQSKNSQTRVDTPNDNKTEAESSTKPSGNTSLRSIKSSWKNLLGQKRNTSFNISNFI 203
           V+ E S++ +TR+DT    K E ES+TK     SLRS+KS+WK+L+G+KRNT F I N I
Sbjct: 301 VILESSRSFRTRLDTRKAKKIEVESNTKQPEPNSLRSLKSTWKDLIGRKRNTPFTIPNII 360

Query: 204 ATVSQKEEELKDDNKKRKLDSDKKEPGLDI--KEESTAD 314
            TV Q+++E   D+           PG+D+  K   T+D
Sbjct: 361 PTVDQQKDESNGDDL----------PGIDLEMKTNETSD 389


>ref|XP_022155065.1| uncharacterized protein LOC111022200 [Momordica charantia]
          Length = 646

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
 Frame = +3

Query: 9   ETNNSVVPEQSKNSQTRVDTPNDNKTEAESSTKPSGNTSLRSIKSSWKNLLGQKRNTSFN 188
           + N  V    + N  T  +   D  +  ++  +     S RS KSSWK L+  K N SF+
Sbjct: 310 DRNEHVPSIPTGNGSTNPEYKPDRTSRPQAPDRVMPIQSSRSQKSSWKTLIRDKNNVSFS 369

Query: 189 ISNFIATVSQKEEELKDDNKKRKLDSDKKEPGLDIK---EESTADVGPVTTEV--SISDI 353
           ISN + +V   +E+ + D+      +  K   L I    E  T +  P+ + V  SISD+
Sbjct: 370 ISNILPSVPANQEQAEVDDLYLAQSTPNKNSDLGIPVVLEGKTDEPIPMKSNVSFSISDV 429

Query: 354 LANDCREMEEEPKTNNLEMPD---------VLSDVINQQDDERKADDINDVKNS 488
           L +     +E+ K ++L + D            +V   + +E K+++I + ++S
Sbjct: 430 LPSVPSADKEQVKADDLNLADSTPNRNINFATDEVSESKSEEMKSENIPETQHS 483


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