BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00045874
         (477 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_011012307.1| double-stranded DNA repair protein Rad50 [Py...    57   2e-06

>ref|WP_011012307.1| double-stranded DNA repair protein Rad50 [Pyrococcus furiosus]
 sp|P58301.1|RAD50_PYRFU RecName: Full=DNA double-strand break repair Rad50 ATPase; AltName:
           Full=pfRad50
 gb|AAL81291.1| smc-like protein [Pyrococcus furiosus DSM 3638]
 gb|AFN03958.1| chromosome segregation protein [Pyrococcus furiosus COM1]
          Length = 882

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
 Frame = -2

Query: 452 KEMEIERKFIEEIQDKIMEMHMVIEKLKEVEVDIEKEQLNIDTCMEKLKELDIEKQQFKK 273
           KE+EI ++ I + ++ +    M  E+L EVE DIE+ +  +    +K  E + +K++ +K
Sbjct: 615 KELEITQREIAKAKETL---EMSFEELAEVEADIERIEKKLSQLKQKYNEEEYKKKREEK 671

Query: 272 DKLMTVVVRLKTQKRLRMRRQSIIK---KKRRAERNIDEQIMNKIKKMIELEYREMMVVE 102
           ++L   + RL+ QK+   +R+  IK   +K +AE+   E++  +IK   +LE  +    E
Sbjct: 672 EELEKELARLEAQKKELEKRRDTIKSTLEKLKAEKENRERVKKEIK---DLEKAKDFTEE 728

Query: 101 LTEKLK 84
           L EK+K
Sbjct: 729 LIEKVK 734