BLASTX nr result

ID: Chrysanthemum22_contig00045755 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00045755
         (591 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10305.1| hypothetical protein Ccrd_011334 [Cynara carduncu...    65   3e-10
ref|XP_021991357.1| collagen alpha-1(XXVII) chain B-like [Helian...    62   5e-09
gb|KVI10306.1| hypothetical protein Ccrd_011335, partial [Cynara...    54   6e-06

>gb|KVI10305.1| hypothetical protein Ccrd_011334 [Cynara cardunculus var. scolymus]
          Length = 105

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -1

Query: 411 IIYFLEGGGAKKGICGIFVGRFGMVVGIEGNGGKENLGML 292
           ++YFLEGGGAK GI G FVGRFG  VGIEGNGGKE LGML
Sbjct: 4   VLYFLEGGGAKNGIFGRFVGRFGN-VGIEGNGGKETLGML 42


>ref|XP_021991357.1| collagen alpha-1(XXVII) chain B-like [Helianthus annuus]
          Length = 102

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -1

Query: 417 LSIIYFLEGGGAKKGICGIFVGRFGMVVGIEGNGGKENLGM 295
           +SI YFL+GGGAKKG+ G  VGRFGM VGIEGNGGK+ LG+
Sbjct: 1   MSIAYFLDGGGAKKGMFGRVVGRFGM-VGIEGNGGKDTLGI 40


>gb|KVI10306.1| hypothetical protein Ccrd_011335, partial [Cynara cardunculus var.
           scolymus]
          Length = 128

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -1

Query: 396 EGGGAKKGICGIFVGRFGMVVGIEGNGGKENLGML 292
           +GGGAKKG  G FVG+FG +VGIEGNGGKE LG+L
Sbjct: 25  QGGGAKKGKLGRFVGKFG-IVGIEGNGGKETLGIL 58


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